mRNA_P-wetherbeei_contig7125.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7125.1.1 vs. uniprot
Match: D7FXS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS4_ECTSI) HSP 1 Score: 222 bits (565), Expect = 2.070e-66 Identity = 115/173 (66.47%), Postives = 143/173 (82.66%), Query Frame = 1
Query: 1 KTVQDAMITMDKVYSLSTDAVLDMNTIADIIAAGFSRVLVYHGDDVNDVRGYLQVKKLIAVSSEDCRMVSSLMLREPEVVSPHKSLLELLNIFQVGHTHIALVTHSPKLTKQCFKNGVPLEGAARPLGIITIEDIIEEIIQEEIYDESDRLSAYIESRAKEVLLKYARRRKHR 519
K+V +AMITMDKV+ L + LD NT+AD++AAG+SRVLVY G+D ++RGYLQVKKLI ++ +D R++SSLMLR P VVSP KSLLELLN FQ G +H+ALV+ SP +T + K GVPLEGAARP+GIIT+EDIIEEIIQEEI DESDRLS +IE RAK+ LL++ARRR+ R
Sbjct: 402 KSVAEAMITMDKVFCLGINEKLDANTMADVMAAGYSRVLVYEGEDTRNIRGYLQVKKLIVLNPDDERVISSLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESDRLSQFIEDRAKDTLLRFARRRQER 574
BLAST of mRNA_P-wetherbeei_contig7125.1.1 vs. uniprot
Match: A0A835ZJ67_9STRA (CNNM transmembrane domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ67_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.500e-51 Identity = 106/219 (48.40%), Postives = 142/219 (64.84%), Query Frame = 1
Query: 1 KTVQDAMITMDKVYSLSTDAVLDMNTIADIIAAGFSRVLVYHGDDVNDVRGYLQ---------------------------------VKKLIAVSSEDCRMVSSLMLREPEVVSPHKSLLELLNIFQVGHTHIAL--------------VTHSPKLTKQCFKNGVPLEGAARPLGIITIEDIIEEIIQEEIYDESDRLSAYIESRAKEVLLKYARRRKH 516
KTV DAM+TMD+VYS+S D LD +AD++AAG+SRV V+ G DV ++RGYLQ VKKLI ++ D R V +L+LR PEVV P+KSLLELLN+FQ+G TH+A+ V+ SPKLT++ ++G+PLEG ARP+GIIT+EDI EEIIQEEI+DESD+ ++Y+E++AK LLKY +R+ H
Sbjct: 457 KTVADAMLTMDRVYSISMDVELDDGKMADLLAAGYSRVPVFEGADVRNIRGYLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKKLIVLNPGDKRQVRTLVLRAPEVVGPNKSLLELLNVFQMGRTHLAMXXXXXXXXXXXXXIVSSSPKLTREALRHGLPLEGNARPIGIITMEDIFEEIIQEEIWDESDKPTSYMEAQAKATLLKYTQRKAH 675
BLAST of mRNA_P-wetherbeei_contig7125.1.1 vs. uniprot
Match: A0A6H5KPI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPI7_9PHAE) HSP 1 Score: 157 bits (396), Expect = 2.440e-41 Identity = 83/120 (69.17%), Postives = 100/120 (83.33%), Query Frame = 1
Query: 160 QVKKLIAVSSEDCRMVSSLMLREPEVVSPHKSLLELLNIFQVGHTHIALVTHSPKLTKQCFKNGVPLEGAARPLGIITIEDIIEEIIQEEIYDESDRLSAYIESRAKEVLLKYARRRKHR 519
+VKKLI +S +D R++SSLMLR P VVSP KSLLELLN FQ G +H+ALV+ SP +T + K GVPLEGAARP+GIIT+EDIIEEIIQEEI DESDRLS +IE RAK+ LL++ARRR+ R
Sbjct: 452 RVKKLIVLSPDDERVISSLMLRVPVVVSPKKSLLELLNTFQTGKSHLALVSSSPAITLESLKRGVPLEGAARPMGIITLEDIIEEIIQEEIMDESDRLSRFIEDRAKDTLLRFARRRQER 571
BLAST of mRNA_P-wetherbeei_contig7125.1.1 vs. uniprot
Match: W7TKN6_9STRA (Protein mam3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKN6_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.330e-37 Identity = 74/149 (49.66%), Postives = 104/149 (69.80%), Query Frame = 1
Query: 1 KTVQDAMITMDKVYSLSTDAVLDMNTIADIIAAGFSRVLVYHGDDVNDVRGYLQVKKLIAVSSEDCRMVSSLMLREPEVVSPHKSLLELLNIFQVGHTHIALVTHSPKLTKQCFKNGVPLEGAARPLGIITIEDIIEEIIQEEIYDESD 447
K + DA+ MD VY+L + +LD N + +I+A G+SR+ V+ D+RG+L VK+LI + D R V +L LR+P VVSP SLLEL+N+FQ G +H+A+V+ P LT+Q ++ PLEG P+GIIT+ED+ EEI+QEEIYDE D
Sbjct: 241 KKICDALKPMDVVYTLCEEDILDENKLCEIMACGYSRIPVHSARGRQDIRGFLLVKRLIVLDPADRRPVRTLPLRQPIVVSPTGSLLELINVFQEGRSHMAIVSPCPDLTRQALRSNKPLEGRIAPIGIITLEDLFEEILQEEIYDEHD 389
BLAST of mRNA_P-wetherbeei_contig7125.1.1 vs. uniprot
Match: A0A6U4FEE5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FEE5_9STRA) HSP 1 Score: 141 bits (356), Expect = 3.010e-36 Identity = 71/149 (47.65%), Postives = 103/149 (69.13%), Query Frame = 1
Query: 1 KTVQDAMITMDKVYSLSTDAVLDMNTIADIIAAGFSRVLVYHGDDVNDVRGYLQVKKLIAVSSEDCRMVSSLMLREPEVVSPHKSLLELLNIFQVGHTHIALVTHSPKLTKQCFKNGVPLEGAARPLGIITIEDIIEEIIQEEIYDESD 447
K V +AM + +VYS+ D V+D T+++++ +GFSR+ V DD D+RG+L VK+LI + +D R + +L + P VSP+ SLLE LN FQ G +H+A V+ P+ T+ G PL G+ARP+GI+T+EDI+E+IIQEEIYDE D
Sbjct: 263 KKVYEAMTPISEVYSVGMDRVMDFQTMSEVMGSGFSRIPVSASDDPGDMRGFLLVKRLITLDPDDAREIKTLRVILPACVSPNASLLETLNKFQEGRSHMAFVSAKPQDTRDLLLRGEPLVGSARPIGILTLEDIVEKIIQEEIYDEDD 411
BLAST of mRNA_P-wetherbeei_contig7125.1.1 vs. uniprot
Match: A0A6V1RRA6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RRA6_HETAK) HSP 1 Score: 130 bits (327), Expect = 3.290e-34 Identity = 76/176 (43.18%), Postives = 112/176 (63.64%), Query Frame = 1
Query: 4 TVQDAMITMDKVYSLSTDAV-LDMNTIADIIAAGFSRVLVYHGDDVNDVRGYLQVKKLIAVSSEDCRMVSSLMLREPEVVSPHKSLLELLNIFQVGHTHIALVTHSPKLTKQCFKNGVP-------LEGAARPLGIITIEDIIEEIIQEEIYDESDRLSAYIESRAKEVLLKYARR 507
TV+D M+ MD VYS+ ++ L+ +T+ADI++ GFSRV+V+ GDD V GYL VK LI + E R + L+ P SP S+L LLN FQ G +H+A+V+H+P++T+ + + L GAARPLGI+T ED+IE IIQEE+ DE++ E +A ++ +Y +R
Sbjct: 39 TVKDIMVHMDNVYSVPFESTELNYDTMADIMSKGFSRVIVHKGDDPTKVVGYLLVKNLIVLDPEAARPIEKEWLKTPIFCSPKDSVLSLLNAFQGGKSHMAIVSHAPRITEIEIQKALAAHDPHPALRGAARPLGIVTFEDVIETIIQEEVVDETN----VQEKKANNIMRRYIQR 210
BLAST of mRNA_P-wetherbeei_contig7125.1.1 vs. uniprot
Match: A0A813K0J6_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813K0J6_POLGL) HSP 1 Score: 129 bits (325), Expect = 3.190e-33 Identity = 63/150 (42.00%), Postives = 102/150 (68.00%), Query Frame = 1
Query: 1 KTVQDAMITMDKVYSLSTDAVLDMNTIADIIAAGFSRVLVYHGDDVNDVRGYLQVKKLIAVSSEDCRMVSSLMLREPEVVSPHKSLLELLNIFQVGHTHIALVTHSPKLTKQCFKNGVPLEGAARPLGIITIEDIIEEIIQEEIYDESDR 450
K V D +M+ +S++ +LD +T+A ++ G SR+ VY+GD +N +RG L VKKLI + D R +S + LR+P V+ P ++LL LN+FQ+GH+H+AL++ P+ +Q +++G + A PLG +TIEDI EE+++E ++DE DR
Sbjct: 128 KNVNDIKESMETAKMISSNTILDHDTLAQLLHWGHSRIFVYNGDRLN-IRGVLMVKKLIVLDPNDKRPISHIPLRKPIVIKPQETLLSTLNLFQMGHSHLALISADPEAVRQAWEHGHAIPSHAVPLGFLTIEDIFEEMLKESVFDEEDR 276
BLAST of mRNA_P-wetherbeei_contig7125.1.1 vs. uniprot
Match: A0A4D9CY62_9STRA (Uncharacterized protein ycf23 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY62_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.490e-32 Identity = 80/181 (44.20%), Postives = 107/181 (59.12%), Query Frame = 1
Query: 1 KTVQDAMITMDKVYSLSTDAVLDMNTI-----------------------ADIIAAGFSRVLVYHGDDVNDVRGYLQVKKLIAVSSEDCRMVSSLMLREPEVVSPHKSLLELLNIFQVGHTHIALVTHSPKLTKQCFKNGVPLEGAARPLGIITIEDIIEEIIQEEIYDESDRLSAYIESR 474
KTVQD ++ M+KV+ LST A LD + + A I+++GFSR+ VY G D + +RG+L VK+LI + R V SL LR P VVSP L++LLN FQ G +H+A+V P+ + K G L+G A PLGIIT+ED+IEEI+QEEI DE DR +E R
Sbjct: 452 KTVQDCLVPMEKVFCLSTQAALDASMLVGSRGGGREGGIGREGAHKEAGLAMIMSSGFSRIPVYEGSDRSFLRGFLLVKRLIVLEPATRRRVGSLALRLPLVVSPLCPLIDLLNTFQEGRSHLAVVAWDPEAALENIKQGRSLKGDAAPLGIITLEDVIEEILQEEILDEHDRSREELERR 632
BLAST of mRNA_P-wetherbeei_contig7125.1.1 vs. uniprot
Match: A0A2D4BSG6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSG6_PYTIN) HSP 1 Score: 129 bits (323), Expect = 6.970e-32 Identity = 75/149 (50.34%), Postives = 97/149 (65.10%), Query Frame = 1
Query: 1 KTVQDAMITMDKVYSLSTDAVLDMNTIADIIAAGFSRVLVYHGDDVNDVRGYLQVKKLIAVSSEDCRMVSSLMLREPEVVSPHKSLLELLNIFQVGHTHIALVTHSPKLTKQCFKNGVPLEGAARPLGIITIEDIIEEIIQEEIYDESD 447
KTVQ MI ++KVY L D LD NT+A+I+A+G SR+ +Y N V G L VK+LI V ED R + L+LR+P VV+P +S +LN FQ G +HIALVT K QC++ + +GIITIED+IEE+IQEEI DESD
Sbjct: 279 KTVQQVMIPIEKVYMLELDTKLDDNTMAEILASGHSRIPIYKKYRSNIV-GLLLVKRLIVVDPEDERPIRDLVLRKPIVVTPDESCYHILNEFQKGRSHIALVTKDAKHVMQCWRKNEDIPADVSFVGIITIEDVIEELIQEEIEDESD 426
BLAST of mRNA_P-wetherbeei_contig7125.1.1 vs. uniprot
Match: W2HE67_PHYPR (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=W2HE67_PHYPR) HSP 1 Score: 127 bits (320), Expect = 1.450e-31 Identity = 71/150 (47.33%), Postives = 98/150 (65.33%), Query Frame = 1
Query: 1 KTVQDAMITMDKVYSLSTDAVLDMNTIADIIAAGFSRVLVYHGDDVNDVRGYLQVKKLIAVSSEDCRMVSSLMLREPEVVSPHKSLLELLNIFQVGHTHIALVTHSPKLTKQCFKNGVPLEGAARPLGIITIEDIIEEIIQEEIYDESDR 450
KTV + MI M +++ L D L+ NT+ADI+A+G SR+ VY N V G L VKKLI + +D R++ L+LR+P +V P S +LN FQ G +HIALVT +L C++N +P+ GI+TIED+IEE+IQEEI DESD+
Sbjct: 275 KTVTEVMIPMSEIFMLEIDTKLNHNTMADILASGHSRIPVYETRRSNIV-GLLFVKKLIVLDPDDARLIRDLVLRKPILVPPSGSCYSMLNEFQKGRSHIALVTKETELVATCWRNNMPIPPHVAFEGIVTIEDVIEELIQEEIEDESDK 423 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7125.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7125.1.1 >prot_P-wetherbeei_contig7125.1.1 ID=prot_P-wetherbeei_contig7125.1.1|Name=mRNA_P-wetherbeei_contig7125.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp MITMDKVYSLSTDAVLDMNTIADIIAAGFSRVLVYHGDDVNDVRGYLQVKback to top mRNA from alignment at P-wetherbeei_contig7125:267..1941+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7125.1.1 ID=mRNA_P-wetherbeei_contig7125.1.1|Name=mRNA_P-wetherbeei_contig7125.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1675bp|location=Sequence derived from alignment at P-wetherbeei_contig7125:267..1941+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7125:267..1941+ >mRNA_P-wetherbeei_contig7125.1.1 ID=mRNA_P-wetherbeei_contig7125.1.1|Name=mRNA_P-wetherbeei_contig7125.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig7125:267..1941+ (Phaeothamnion wetherbeei SAG_119_79)back to top |