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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1391 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 1230 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186958.8669422-UTR-P-wetherbeei_contig7108:362..425 | 1683186958.8669422-UTR-P-wetherbeei_contig7108:362..425 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig7108 363..425 - |
| 1683186958.881968-UTR-P-wetherbeei_contig7108:705..803 | 1683186958.881968-UTR-P-wetherbeei_contig7108:705..803 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig7108 706..803 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186958.8940334-CDS-P-wetherbeei_contig7108:803..2033 | 1683186958.8940334-CDS-P-wetherbeei_contig7108:803..2033 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig7108 804..2033 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7108.2.1 >prot_P-wetherbeei_contig7108.2.1 ID=prot_P-wetherbeei_contig7108.2.1|Name=mRNA_P-wetherbeei_contig7108.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=410bp
MSPSERVAWVLRRMIDDGLLPDAIVCHTAVKVLEEAGDPAAADATYRVGV
AAGLLTPPWKVPGRVLDMHAHSAALAKVALRQALRALYERYDRHSGDGGG
GGGCGIVVSSAAGDATSAEGSAFGKRAVNAASILAGGTAGDAAAATDARG
RDIDEWGLAIIVGAPESEPSVPSERSSGGNSGTGGDLTGSELCEGQRRRR
RRRQRQPATLALSDDAEATRATAAAASSSAPGSAPPSHLQQRPSDIYSDK
SHRASSPAQPPALWQHLKETFEPSRLSGAAAPIRWQRQRTPSPSSRPPPS
PLSRPPPSTPPSPAPSLRRNTEGSNAGNVGSGRSGSGGAGHDNAAGLPLP
QQQRRQRRVEPAVLRPALLRYLAEAFEPPITATPVQRGGVLRIAGPDLRR
WLDGGGVVR* back to topmRNA from alignment at P-wetherbeei_contig7108:363..2033- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig7108.2.1 ID=mRNA_P-wetherbeei_contig7108.2.1|Name=mRNA_P-wetherbeei_contig7108.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1671bp|location=Sequence derived from alignment at P-wetherbeei_contig7108:363..2033- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGCCATCGGAGCGCGTGGCGTGGGTGCTGCGGCGGATGATCGACGA
CGGCCTCCTGCCGGACGCCATAGTCTGCCACACGGCGGTCAAAGTCCTGG
AGGAGGCCGGCGACCCGGCGGCGGCGGACGCCACCTATCGTGTCGGCGTC
GCCGCGGGTCTACTGACGCCGCCGTGGAAGGTACCGGGCCGCGTGCTCGA
CATGCACGCCCACAGTGCTGCCCTCGCCAAGGTCGCGCTCCGGCAGGCGC
TGCGGGCACTGTACGAGCGCTATGATCGCCACAGCGGCGACGGCGGCGGC
GGCGGCGGCTGCGGCATCGTTGTCAGCAGCGCAGCGGGAGATGCCACTTC
GGCCGAAGGGAGCGCATTTGGCAAGCGCGCCGTCAATGCCGCGAGCATCC
TGGCTGGAGGTACGGCTGGTGACGCCGCTGCCGCGACAGACGCGAGAGGA
CGCGACATCGACGAATGGGGCCTTGCCATCATCGTTGGGGCTCCTGAGTC
CGAACCATCGGTGCCTTCTGAACGTTCCAGTGGCGGAAACAGTGGGACCG
GCGGAGATTTGACCGGCAGCGAATTATGTGAGGGACAGAGGCGACGACGG
CGGCGGCGGCAGCGGCAGCCGGCGACGCTGGCTTTATCTGACGACGCTGA
GGCGACGAGAGCCACGGCGGCCGCTGCGTCGTCGTCAGCACCAGGATCGG
CGCCGCCATCACACCTGCAGCAGCGGCCAAGCGATATTTATTCGGATAAG
AGCCATCGGGCGAGCTCGCCGGCGCAGCCGCCGGCGCTCTGGCAGCATCT
GAAGGAGACTTTCGAGCCCTCAAGACTTTCAGGTGCGGCGGCGCCAATCC
GGTGGCAGCGGCAGCGCACGCCGTCGCCGTCGTCGCGGCCGCCGCCGTCG
CCATTGTCACGGCCGCCGCCGTCGACGCCGCCTTCGCCAGCGCCATCGCT
GCGAAGAAACACTGAGGGTAGCAATGCCGGCAATGTCGGCAGCGGCCGAA
GCGGCAGCGGTGGCGCGGGCCACGACAATGCTGCCGGGCTACCTCTGCCG
CAGCAGCAGCGGCGGCAACGGCGGGTGGAGCCAGCAGTGCTGCGGCCGGC
GCTGCTACGCTACCTGGCGGAGGCATTCGAGCCGCCAATCACCGCGACGC
CCGTGCAGCGTGGCGGCGTCCTGCGGATCGCCGGGCCGGACCTGCGGCGC
TGGCTGGACGGCGGCGGCGTTGTCCGCTAGTTCGAGGGCTCGGGCAGCAG
GGAGAGGGAGGGTTGTCGGGGCATCTGCTGCAGCCGTCGGAAGAAGTAAG
CTCAGACACCGGCTCGAAAATGGAATGCCTTGTGCACAGGTGCACAGAGG
GGAGGTTTTGGAGAATTGCGCGGAAAAGTAGAGCCAAAATCACACATTTA
CTATCACATCAACCCCTTTAGGTATCACAACACCAAAATTTTTTAAAATA
GTACAGCTCTGAGCTTCTGCGGGCCTTCGAACGACCCTTGTCTTGAGAGA
TGTTCAGTCACAAGTTTGTTGTCAGACAGCAACCACGCTCAAGCGCTAGT
AATGTATTCCTCTTCCTACTACTCTCTTCCTGCTTTTTTCATTAAAAATA
ATACTTACTTTTACGTACGTTCCGCAGCGAGCGCGGCAGCCTGCTTTTAC
TGTCCCGCGTCAACGCGTCAG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig7108:363..2033- >mRNA_P-wetherbeei_contig7108.2.1 ID=mRNA_P-wetherbeei_contig7108.2.1|Name=mRNA_P-wetherbeei_contig7108.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1230bp|location=Sequence derived from alignment at P-wetherbeei_contig7108:363..2033- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGCCATCGGAGCGCGTGGCGTGGGTGCTGCGGCGGATGATCGACGA
CGGCCTCCTGCCGGACGCCATAGTCTGCCACACGGCGGTCAAAGTCCTGG
AGGAGGCCGGCGACCCGGCGGCGGCGGACGCCACCTATCGTGTCGGCGTC
GCCGCGGGTCTACTGACGCCGCCGTGGAAGGTACCGGGCCGCGTGCTCGA
CATGCACGCCCACAGTGCTGCCCTCGCCAAGGTCGCGCTCCGGCAGGCGC
TGCGGGCACTGTACGAGCGCTATGATCGCCACAGCGGCGACGGCGGCGGC
GGCGGCGGCTGCGGCATCGTTGTCAGCAGCGCAGCGGGAGATGCCACTTC
GGCCGAAGGGAGCGCATTTGGCAAGCGCGCCGTCAATGCCGCGAGCATCC
TGGCTGGAGGTACGGCTGGTGACGCCGCTGCCGCGACAGACGCGAGAGGA
CGCGACATCGACGAATGGGGCCTTGCCATCATCGTTGGGGCTCCTGAGTC
CGAACCATCGGTGCCTTCTGAACGTTCCAGTGGCGGAAACAGTGGGACCG
GCGGAGATTTGACCGGCAGCGAATTATGTGAGGGACAGAGGCGACGACGG
CGGCGGCGGCAGCGGCAGCCGGCGACGCTGGCTTTATCTGACGACGCTGA
GGCGACGAGAGCCACGGCGGCCGCTGCGTCGTCGTCAGCACCAGGATCGG
CGCCGCCATCACACCTGCAGCAGCGGCCAAGCGATATTTATTCGGATAAG
AGCCATCGGGCGAGCTCGCCGGCGCAGCCGCCGGCGCTCTGGCAGCATCT
GAAGGAGACTTTCGAGCCCTCAAGACTTTCAGGTGCGGCGGCGCCAATCC
GGTGGCAGCGGCAGCGCACGCCGTCGCCGTCGTCGCGGCCGCCGCCGTCG
CCATTGTCACGGCCGCCGCCGTCGACGCCGCCTTCGCCAGCGCCATCGCT
GCGAAGAAACACTGAGGGTAGCAATGCCGGCAATGTCGGCAGCGGCCGAA
GCGGCAGCGGTGGCGCGGGCCACGACAATGCTGCCGGGCTACCTCTGCCG
CAGCAGCAGCGGCGGCAACGGCGGGTGGAGCCAGCAGTGCTGCGGCCGGC
GCTGCTACGCTACCTGGCGGAGGCATTCGAGCCGCCAATCACCGCGACGC
CCGTGCAGCGTGGCGGCGTCCTGCGGATCGCCGGGCCGGACCTGCGGCGC
TGGCTGGACGGCGGCGGCGTTGTCCGCTAG back to top
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