mRNA_P-wetherbeei_contig7058.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7058.1.1 vs. uniprot
Match: A0A835Z5U3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U3_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.940e-36 Identity = 72/129 (55.81%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 1 QPLGLVLEEDGDRNVIVAEVRSGSNAAKSGKVKPGDKIAFVSATFGDEVWSARGVGLSRVQSAVKVRQGDYVTLVLESGKETAAKAKNASAVMAAKKQAEEDAAVKKARLLEELEADSQKRKKGFFGLF 387
+PLGLVLEE+ +V + +V+ SNA+++ KV PGDKI+F+SATFGD++WS RG GL+RVQ+AV+VRQGD V LVLES E+ +K A+A +K+ EEDA VK+ RLL+ L+ D++K+ K FFGLF
Sbjct: 71 KPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDEDTKKKSKKFFGLF 199
BLAST of mRNA_P-wetherbeei_contig7058.1.1 vs. uniprot
Match: D8LTE7_ECTSI (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE7_ECTSI) HSP 1 Score: 114 bits (285), Expect = 3.840e-29 Identity = 66/130 (50.77%), Postives = 91/130 (70.00%), Query Frame = 1
Query: 1 QPLGLVLEEDGDRNVIVAEVRSGSNAAKSGKVKPGDKIAFVSATFGDEVWSARGVGLSRVQSAVKVRQGDYVTLVLESGKETAAKAKNASAVMAAKKQAEEDAAVKKARLLEELEADSQ-KRKKGFFGLF 387
+P+GLVLEED NV + E+ GSNA++ ++ GDKI FVSATFG+E+WSA+GVGLSRVQSA+++R G V LVLE+ KE K SA + + A+E K+ RLL EL D++ ++KK ++GLF
Sbjct: 89 KPMGLVLEEDERGNVYIVEIVPGSNASRKKQINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLETSKEAEKKMARDSARLKRLQDAKETEEDKRDRLLRELSDDTKVQKKKPWYGLF 218
BLAST of mRNA_P-wetherbeei_contig7058.1.1 vs. uniprot
Match: A0A7S1E487_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E487_9STRA) HSP 1 Score: 113 bits (283), Expect = 4.870e-29 Identity = 68/130 (52.31%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 1 QPLGLVLEEDGDRNVIVAEVRSGSNAAKSGKVKPGDKIAFVSATFGDEVWSARGVGLSRVQSAVKVRQGDYVTLVLESGKETAAKAKNASAVMAAKKQAEEDAAVKKARLLEELEADSQKRKKG-FFGLF 387
+PLGL+L+ED D NV V + NAA++G VK GD + SATFG+++WS RGVGL+RV +A++VR G+ V L LES +T KA+ A A + A A KK RLL ELE+D QK KKG FFGLF
Sbjct: 71 RPLGLILKEDKDGNVYVETIAPKGNAARAGGVKEGDVVTMCSATFGNDMWSTRGVGLTRVLAAIRVRAGNTVKLALESPNQTQQKARRVEASSKAAEAARLKAQEKKDRLLTELESDEQKLKKGKFFGLF 200
BLAST of mRNA_P-wetherbeei_contig7058.1.1 vs. uniprot
Match: A0A6S8XV32_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XV32_9STRA) HSP 1 Score: 113 bits (282), Expect = 7.620e-29 Identity = 68/130 (52.31%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 1 QPLGLVLEEDGDRNVIVAEVRSGSNAAKSGKVKPGDKIAFVSATFGDEVWSARGVGLSRVQSAVKVRQGDYVTLVLESGKETAAKAKNASAVMAAKKQAEEDAAVKKARLLEELEADSQKRKKG-FFGLF 387
+PLGLVL ED D NV V V NAA++G VK GD + SATFGD++WS RGVGL+RV +A++VR G V+LV ES +ET K K +S A ++A + A KK LL+ELE D ++ KKG F GLF
Sbjct: 75 RPLGLVLNEDDDGNVYVETVAPKGNAARTGMVKEGDIVTMCSATFGDQMWSTRGVGLTRVLAAIRVRAGPTVSLVFESSQETQKKVKISSKAAVAAEEARKRAQEKKDMLLKELERDEKRLKKGKFLGLF 204
BLAST of mRNA_P-wetherbeei_contig7058.1.1 vs. uniprot
Match: B8C928_THAPS (PDZ domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C928_THAPS) HSP 1 Score: 111 bits (278), Expect = 2.540e-28 Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = 1
Query: 1 QPLGLVLEEDGDRNVIVAEVRSGSNAAKSGKVKPGDKIAFVSATFGDEVWSARGVGLSRVQSAVKVRQGDYVTLVLESGKETAAKAKNASAVMAAKKQAEEDAAVKKARLLEELEADSQKRKKG-FFGLF 387
+PLGLVL+ED + NV V V NAA+SG+VK GD + SATFGD++WS RG GL+RV +A++VR G V+LV ES + K + AA K+A+E A K+ LL ELEAD +K KKG F GLF
Sbjct: 68 RPLGLVLDEDDNGNVFVQTVAPRGNAARSGQVKEGDIVTMCSATFGDQMWSTRGAGLTRVLAAIRVRAGPTVSLVFESTTQRKVKGAEVAKQAAAAKEAKERAQKKRDELLSELEADERKLKKGKFLGLF 197
BLAST of mRNA_P-wetherbeei_contig7058.1.1 vs. uniprot
Match: A0A7R9W701_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W701_9STRA) HSP 1 Score: 111 bits (278), Expect = 2.890e-28 Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = 1
Query: 1 QPLGLVLEEDGDRNVIVAEVRSGSNAAKSGKVKPGDKIAFVSATFGDEVWSARGVGLSRVQSAVKVRQGDYVTLVLESGKETAAKAKNASAVMAAKKQAEEDAAVKKARLLEELEADSQKRKKG-FFGLF 387
+PLGLVL EDGD NV V V NAA++G+V+ GD + SATFGD++WS RG GL+RV +A++VR G V LV ES ET KAK + A + A A K+ +LL+ELE D ++ KKG F GLF
Sbjct: 73 RPLGLVLNEDGDGNVYVETVAPRGNAARTGEVREGDLVTMCSATFGDQMWSCRGAGLTRVLAAIRVRAGPTVKLVFESTSETQNKAKMGAKAAKAAEDARAKAQAKRDQLLDELEQDEKRLKKGKFLGLF 202
BLAST of mRNA_P-wetherbeei_contig7058.1.1 vs. uniprot
Match: A0A1E7FDA8_9STRA (PDZ domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDA8_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.630e-28 Identity = 69/130 (53.08%), Postives = 84/130 (64.62%), Query Frame = 1
Query: 1 QPLGLVLEEDGDRNVIVAEVRSGSNAAKSGKVKPGDKIAFVSATFGDEVWSARGVGLSRVQSAVKVRQGDYVTLVLESGKETAAKAKNASAVMAAKKQAEEDAAVKKARLLEELEADSQKRKKG-FFGLF 387
+PLGLVL +D NV V V + NAA++GKVK GD + VSATFGD++WS RGVGL+RV +A++VR G V+LV ES + KA + S A K A E A KK LL ELE D K KKG F GLF
Sbjct: 82 KPLGLVLNQDDAGNVYVETVAARGNAARTGKVKEGDIVTMVSATFGDQMWSTRGVGLTRVLTAIRVRTGPRVSLVFESQNQYKKKAASTSKQQQAMKDAREAAQAKKDTLLSELEQDETKLKKGKFLGLF 211
BLAST of mRNA_P-wetherbeei_contig7058.1.1 vs. uniprot
Match: A0A7S4IT66_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IT66_9STRA) HSP 1 Score: 111 bits (277), Expect = 4.090e-28 Identity = 64/130 (49.23%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 1 QPLGLVLEEDGDRNVIVAEVRSGSNAAKSGKVKPGDKIAFVSATFGDEVWSARGVGLSRVQSAVKVRQGDYVTLVLESGKETAAKAKNASAVMAAKKQAEEDAAVKKARLLEELEADSQKRKKG-FFGLF 387
+PLGLVL +DG+ NV V V NAA++G+VK GD + SATFGD++WS RG GL+RV +A++VR G V LV ES E+ K K + + A ++A +A K+ +LL+ELE D +K KKG F GLF
Sbjct: 73 RPLGLVLNDDGNGNVYVETVAPRGNAARTGEVKEGDLVTMCSATFGDQMWSCRGAGLTRVLAAIRVRAGPTVKLVFESTAESKTKVKRGAKAVKAAEEARANAQAKRDQLLDELEQDEKKLKKGKFLGLF 202
BLAST of mRNA_P-wetherbeei_contig7058.1.1 vs. uniprot
Match: A0A7S0ATU5_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ATU5_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.440e-27 Identity = 65/130 (50.00%), Postives = 86/130 (66.15%), Query Frame = 1
Query: 1 QPLGLVLEEDGDRNVIVAEVRSGSNAAKSGKVKPGDKIAFVSATFGDEVWSARGVGLSRVQSAVKVRQGDYVTLVLESGKETAAKAKNASAVMAAKKQAEEDAAVKKARLLEELEADSQKRKKG-FFGLF 387
+PLG+VL ED D NV V V + NAA++G+V+ GD + S+TFGD++WS RG GLSRV SA+++R G V L LES KE KA+ + + A++ A A KK LLEEL+ D Q+ KKG F GLF
Sbjct: 68 RPLGVVLGEDADGNVYVETVAARGNAARTGEVREGDFVTMCSSTFGDDMWSCRGAGLSRVLSAIRLRAGPTVKLALESSKEGNVKAQRTAKNLQAEEAARAKAQAKKDSLLEELQKDEQRLKKGKFLGLF 197
BLAST of mRNA_P-wetherbeei_contig7058.1.1 vs. uniprot
Match: A0A7S2N2W7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N2W7_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.800e-27 Identity = 66/130 (50.77%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 1 QPLGLVLEEDGDRNVIVAEVRSGSNAAKSGKVKPGDKIAFVSATFGDEVWSARGVGLSRVQSAVKVRQGDYVTLVLESGKETAAKAKNASAVMAAKKQAEEDAAVKKARLLEELEADSQKRKKG-FFGLF 387
+PLGLVL ED D NV V V NAA++G VK GD + SATFG+++WS RGVGL+RV +A++VR G V+LV ES ET + K ++ AA +A + A KK +LL+ELE D ++ KKG F GLF
Sbjct: 77 RPLGLVLNEDDDGNVYVETVAPKGNAARTGLVKEGDIVTMCSATFGEQMWSTRGVGLTRVLAAIRVRAGPTVSLVFESPDETQRRVKTSAKAAAAADEARKRAQDKKDQLLKELERDEKRLKKGKFLGLF 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7058.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7058.1.1 >prot_P-wetherbeei_contig7058.1.1 ID=prot_P-wetherbeei_contig7058.1.1|Name=mRNA_P-wetherbeei_contig7058.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp QPLGLVLEEDGDRNVIVAEVRSGSNAAKSGKVKPGDKIAFVSATFGDEVWback to top mRNA from alignment at P-wetherbeei_contig7058:1030..2132+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7058.1.1 ID=mRNA_P-wetherbeei_contig7058.1.1|Name=mRNA_P-wetherbeei_contig7058.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1103bp|location=Sequence derived from alignment at P-wetherbeei_contig7058:1030..2132+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7058:1030..2132+ >mRNA_P-wetherbeei_contig7058.1.1 ID=mRNA_P-wetherbeei_contig7058.1.1|Name=mRNA_P-wetherbeei_contig7058.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig7058:1030..2132+ (Phaeothamnion wetherbeei SAG_119_79)back to top |