prot_P-wetherbeei_contig7023.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7023.1.1
Unique Nameprot_P-wetherbeei_contig7023.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length211
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7023.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 25..50
e-value: 0.0049
score: 26.1
coord: 185..210
e-value: 0.065
score: 22.4
coord: 77..102
e-value: 3.7E-4
score: 29.8
coord: 159..184
e-value: 0.012
score: 24.8
coord: 51..76
e-value: 0.0035
score: 26.6
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 51..73
e-value: 0.87
score: 9.8
coord: 162..182
e-value: 1.9
score: 8.8
coord: 188..208
e-value: 0.46
score: 10.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 2..124
e-value: 1.4E-23
score: 84.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 125..211
e-value: 6.7E-12
score: 47.0
NoneNo IPR availablePANTHERPTHR13318UNCHARACTERIZEDcoord: 90..210
NoneNo IPR availablePANTHERPTHR13318:SF88EIN3-BINDING F-BOX PROTEIN 1coord: 90..210
NoneNo IPR availablePANTHERPTHR13318:SF88EIN3-BINDING F-BOX PROTEIN 1coord: 2..99
NoneNo IPR availablePANTHERPTHR13318UNCHARACTERIZEDcoord: 2..99
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 2..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7023contigP-wetherbeei_contig7023:915..2278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7023.1.1mRNA_P-wetherbeei_contig7023.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7023 915..2278 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7023.1.1 ID=prot_P-wetherbeei_contig7023.1.1|Name=mRNA_P-wetherbeei_contig7023.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=211bp
GLVALSVAGALLVTNVGITCVAESCPLLENLCVKRCSSVGDYAVAAVAAG
CPRLRRLDLELCIAVGDGGLAALGRHSARLSELVLCHCQRISDHGLAALA
RGCPALRMLDLTASYLVTFDAPAPDATLMPLSGLLALDVRDSSRVGDEEL
GAIACCAPNLLIQRLGVEGCPRITDRGLAALARGGRDLRTLGLNDLRHIT
DRGVAALASKC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf