mRNA_P-wetherbeei_contig6945.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6945.1.1 vs. uniprot
Match: A0A4D9CPF1_9STRA (NAD(P)-bd_dom domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPF1_9STRA) HSP 1 Score: 216 bits (551), Expect = 4.040e-65 Identity = 127/235 (54.04%), Postives = 151/235 (64.26%), Query Frame = 1
Query: 289 KKILVFGATGKTGKRVVMALVGEGANVVAGVRSREKASAELGDAREGLQFLGVDVVCGKE--LAGAVRGCDAVVIATGFTPSFPPDPLGPLKVDYLGTRRVIDACVDAQVPKLVMISSLLTNGLAAGQGLNPNYLLLNAFGGVLLLKRKAEMYLENQAFLDWTIVRPGGLKNSPPVGNIVFASRDTLFSGAISREQVARVVVEAIVEPAASRKIVEIVARESAPYVGFAAGFESV 987
K +LV GATGKTGKR+V L+ +G V AGVR K LG L FL VDVV LA V AV+ ATG++PS P D LGP KVD GT ++ +A V A VPK+V++SSLLTNG AAGQGLN NY++LN FGGVL+ K AE + LDWTIVRPGGL+ SPP G + + DTLF G+ISR VA V V A+ AASRKIVEIV+ AP + F GF S
Sbjct: 31 KGVLVVGATGKTGKRIVEVLLKKGRKVTAGVRDLAKGEEALGKPGNKLSFLEVDVVADSPTTLAEKVTDYSAVICATGYSPSGPIDLLGPYKVDNKGTTKLAEALVAAGVPKMVLVSSLLTNGWAAGQGLNKNYIILNLFGGVLVAKNTAERKIMATTGLDWTIVRPGGLRESPPEGRVKYGKADTLFGGSISRYSVAEVCVAALDSKAASRKIVEIVSEGDAPKLTFEQGFASA 265
BLAST of mRNA_P-wetherbeei_contig6945.1.1 vs. uniprot
Match: A0A251VQE7_HELAN (Putative NAD(P)-binding Rossmann-fold superfamily protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VQE7_HELAN) HSP 1 Score: 201 bits (510), Expect = 9.280e-59 Identity = 124/245 (50.61%), Postives = 158/245 (64.49%), Query Frame = 1
Query: 262 EPSEGRFDGKKILVFGATGKTGKRVVMALVGEGANVVAGVRSREKASAELGDAREGLQFLGVDVVCGKE-LAGAVRG-CDAVVIATGFTPSFPPDPLGPLKVDYLGTRRVIDACVDAQVPKLVMISSLLTNGLAAGQGLNPNYLLLNAFGGVLLLKRKAEMYLENQAFLDWTIVRPGGLKNSPPVGNIVFASRDTLFSGAISREQVARVVVEAIVEPAASRKIVEIVARESAPYVGFAAGFESVE 990
E SE + KKI V GATGKTGKR+V L+ +G V AGVR +KA + + E LQF+ DV G E LA A+ DAV+ ATGF S+ D L P KVDY GT ++DAC V + +++SS+L NG A GQ LNP Y+ LNAFG VL+ K +AE Y+ +++TI+RPGGLKN PP GNIV DTL G+ISR+QVA V VE+++ P AS K+VEIVAR AP F F S++
Sbjct: 39 EISEIEAEKKKIFVSGATGKTGKRIVEQLLAKGFAVKAGVRDADKAKSMFPNPIEDLQFVKSDVTEGSEKLADAIGDDSDAVICATGFQYSW--DLLAPWKVDYYGTVNLVDACRKVGVKRFILVSSILVNGAAMGQLLNPAYVFLNAFGLVLVAKLQAEQYIRKSG-INYTIIRPGGLKNDPPNGNIVMEPEDTLSDGSISRDQVAEVAVESLLHPQASYKVVEIVARTDAPKKSFIELFGSIK 280
BLAST of mRNA_P-wetherbeei_contig6945.1.1 vs. uniprot
Match: A0A2J6KT57_LACSA (NAD(P)-bd_dom domain-containing protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6KT57_LACSA) HSP 1 Score: 200 bits (508), Expect = 2.870e-58 Identity = 122/241 (50.62%), Postives = 155/241 (64.32%), Query Frame = 1
Query: 274 GRFDGKKILVFGATGKTGKRVVMALVGEGANVVAGVRSREKASAELGDAREGLQFLGVDVVCGKE-LAGAVRG-CDAVVIATGFTPSFPPDPLGPLKVDYLGTRRVIDACVDAQVPKLVMISSLLTNGLAAGQGLNPNYLLLNAFGGVLLLKRKAEMYLENQAFLDWTIVRPGGLKNSPPVGNIVFASRDTLFSGAISREQVARVVVEAIVEPAASRKIVEIVARESAPYVGFAAGFESVE 990
G+ KKI V GATGKTGKR+V L+ +G V AGVR EKA + + LQ + DV G E LA A+ DAVV ATGF S+ D L P KVDY GT +++AC V K V++SS+L NG A GQ LNP Y+ LNAFG VL+ K +AE Y+ +++TI+RPGGLKN PP GN+V DTL G+ISR+QVA V VEA+++P +S K+VEIVAR AP F F S++
Sbjct: 58 GKSGKKKIFVSGATGKTGKRIVEQLLAKGFAVKAGVRDAEKAKTIFPNLNQDLQIVKADVTEGSEKLAEAIGDDSDAVVCATGFQYSW--DLLAPWKVDYYGTVNLVEACRKLGVTKFVLVSSILVNGAAMGQLLNPAYVFLNAFGLVLVAKLQAEQYIRKSG-INYTIIRPGGLKNDPPNGNVVMEPEDTLSEGSISRDQVAEVAVEALLQPQSSYKVVEIVARTEAPKKSFEELFSSIK 295
BLAST of mRNA_P-wetherbeei_contig6945.1.1 vs. uniprot
Match: UPI001CB93C71 (uncharacterized protein At2g34460, chloroplastic isoform X1 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB93C71) HSP 1 Score: 198 bits (504), Expect = 5.600e-58 Identity = 119/236 (50.42%), Postives = 150/236 (63.56%), Query Frame = 1
Query: 289 KKILVFGATGKTGKRVVMALVGEGANVVAGVRSREKASAELGDAREGLQFLGVDVVCGKELAGAVRGCD--AVVIATGFTPSFPPDPLGPLKVDYLGTRRVIDACVDAQVPKLVMISSLLTNGLAAGQGLNPNYLLLNAFGGVLLLKRKAEMYLENQAFLDWTIVRPGGLKNSPPVGNIVFASRDTLFSGAISREQVARVVVEAIVEPAASRKIVEIVARESAPYVGFAAGFESVE 990
KKI V GATGKTGKR+V L+ +G V AG+R +KA + E LQF+ DV G E G D AV+ ATGF S D L P KVDY GT ++DAC V + + +SS+L NG A GQ LNP Y++LNAFG VL+ K +AE Y+ +++TIVRPGGLKN PP G+IV S DTLF G+ISR+QVA V VEA++ +S K+VEIVAR AP F F S++
Sbjct: 39 KKIFVAGATGKTGKRIVEQLLAKGFAVKAGMRDADKAKTIFANQTEDLQFVKADVTEGFEKLADAIGDDSVAVICATGFQYSL--DVLAPWKVDYYGTINLVDACRKVGVSRFIFVSSILVNGAAMGQLLNPAYIVLNAFGLVLMAKLQAEQYIRKSG-INYTIVRPGGLKNDPPNGSIVMESEDTLFEGSISRDQVAEVAVEALLHQQSSYKVVEIVARTDAPKKSFEDLFSSIQ 271
BLAST of mRNA_P-wetherbeei_contig6945.1.1 vs. uniprot
Match: A0A2U1NQA9_ARTAN (NAD(P)-binding Rossmann-fold superfamily protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1NQA9_ARTAN) HSP 1 Score: 198 bits (503), Expect = 1.510e-57 Identity = 119/236 (50.42%), Postives = 152/236 (64.41%), Query Frame = 1
Query: 289 KKILVFGATGKTGKRVVMALVGEGANVVAGVRSREKASAELGDAREGLQFLGVDVVCGKE-LAGAVRG-CDAVVIATGFTPSFPPDPLGPLKVDYLGTRRVIDACVDAQVPKLVMISSLLTNGLAAGQGLNPNYLLLNAFGGVLLLKRKAEMYLENQAFLDWTIVRPGGLKNSPPVGNIVFASRDTLFSGAISREQVARVVVEAIVEPAASRKIVEIVARESAPYVGFAAGFESVE 990
KKI V GATGKTGKR+V L+ +G V AGVR EKA + + LQ + DV G E LA A+ DAV+ ATGF S D L P KVDY GT ++DAC V + +++SS+L NG A GQ LNP Y++LNAFG VL+ K +AE Y+ +++TI+RPGGLKN PP GNIV DTL G+ISR+QVA V VE+++ P +S K+VEIVAR AP F F S++
Sbjct: 61 KKIFVSGATGKTGKRIVEQLLAKGFAVKAGVRDAEKAKTMFKNQNQDLQIVNADVTEGPEKLANAIGDDSDAVICATGFQYSL--DVLAPWKVDYYGTVNLVDACRKVGVSRFILVSSILVNGAAMGQLLNPAYIVLNAFGLVLVAKLQAEQYIRKSG-INFTIIRPGGLKNDPPSGNIVMEPEDTLSEGSISRDQVAEVAVESLLCPQSSYKVVEIVARTEAPKTSFEELFGSIK 293
BLAST of mRNA_P-wetherbeei_contig6945.1.1 vs. uniprot
Match: A9NWJ7_PICSI (NAD(P)-bd_dom domain-containing protein n=2 Tax=Picea sitchensis TaxID=3332 RepID=A9NWJ7_PICSI) HSP 1 Score: 197 bits (501), Expect = 2.240e-57 Identity = 120/245 (48.98%), Postives = 156/245 (63.67%), Query Frame = 1
Query: 259 GEPSEGRFDGKKILVFGATGKTGKRVVMALVGEGANVVAGVRSREKASAELGDAREGLQFLGVDVVCGK-ELAGAVRGCDAVVIATGFTPSFPPDPLGPLKVDYLGTRRVIDACVDAQVPKLVMISSLLTNGLAAGQGLNPNYLLLNAFGGVLLLKRKAEMYLENQAFLDWTIVRPGGLKNSPPVGNIVFASRDTLFSGAISREQVARVVVEAIVEPAASRKIVEIVARESAPYVGFAAGFESVE 990
GEP+E R K + V GATG TGKR+V L+ +G NV AGVR + A +QF+ DV G +L+ A+ +AV+ ATGF PS D L P KVD GT ++DAC V KL++ISS+L NG A GQ NP Y++LN FG L+ K +AE Y+ +D+TIVRPGGL+N PP GNIV + DTLF G+ISR+QVA V VEA++ P AS K+VEIV+RE+AP F S++
Sbjct: 46 GEPNEQRTT-KTVFVAGATGNTGKRIVTQLLSKGFNVKAGVRDVDSAKNNF-PTDTNIQFVKADVTEGAAKLSEAIGDAEAVICATGFRPSL--DFLAPWKVDNFGTVNLVDACRSIGVNKLILISSILVNGAAIGQLFNPAYIVLNVFGLTLVAKLQAEQYIRKSG-IDFTIVRPGGLRNDPPSGNIVMQAEDTLFEGSISRDQVAEVAVEALLYPEASYKVVEIVSRENAPKKSLQELFASIK 285
BLAST of mRNA_P-wetherbeei_contig6945.1.1 vs. uniprot
Match: UPI001FB0A020 (uncharacterized protein At2g34460, chloroplastic n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0A020) HSP 1 Score: 196 bits (499), Expect = 3.840e-57 Identity = 118/236 (50.00%), Postives = 155/236 (65.68%), Query Frame = 1
Query: 289 KKILVFGATGKTGKRVVMALVGEGANVVAGVRSREKASAELGDAREGLQFLGVDVVCGK-ELAGAV-RGCDAVVIATGFTPSFPPDPLGPLKVDYLGTRRVIDACVDAQVPKLVMISSLLTNGLAAGQGLNPNYLLLNAFGGVLLLKRKAEMYLENQAFLDWTIVRPGGLKNSPPVGNIVFASRDTLFSGAISREQVARVVVEAIVEPAASRKIVEIVARESAPYVGFAAGFESVE 990
KKI V GATG+TGKR+V L+ +G NV AGVR+ EKA + + ++F+ DV G +LA A+ DAV+ ATGF PSF D P +VD GT ++DAC + + ++ISS+L NG A GQ LNP Y+ LN FG L+ K +AE Y+ +++TIVRPGGLKN PPVGNIV DTLF+G+ISR+QVA V VEA++ P +S K+VEIVAR AP F F S++
Sbjct: 47 KKIFVAGATGETGKRIVQQLLAKGFNVKAGVRNIEKAKTTFPQS-DFIEFVKADVTDGSTKLAEAIGNDSDAVICATGFRPSF--DLSAPWRVDNFGTVNLVDACGKQGIKRFILISSILVNGAAMGQVLNPAYIFLNVFGLTLVAKLQAEKYIRKSG-INYTIVRPGGLKNDPPVGNIVMEPEDTLFTGSISRDQVAEVAVEALILPESSYKVVEIVARTDAPNKPFHQLFGSIK 278
BLAST of mRNA_P-wetherbeei_contig6945.1.1 vs. uniprot
Match: A0A2R6Q6P7_ACTCC (NAD(P)-bd_dom domain-containing protein n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6Q6P7_ACTCC) HSP 1 Score: 196 bits (499), Expect = 5.460e-57 Identity = 117/236 (49.58%), Postives = 150/236 (63.56%), Query Frame = 1
Query: 289 KKILVFGATGKTGKRVVMALVGEGANVVAGVRSREKASAELGDAREGLQFLGVDVVCGK-ELAGAVRG-CDAVVIATGFTPSFPPDPLGPLKVDYLGTRRVIDACVDAQVPKLVMISSLLTNGLAAGQGLNPNYLLLNAFGGVLLLKRKAEMYLENQAFLDWTIVRPGGLKNSPPVGNIVFASRDTLFSGAISREQVARVVVEAIVEPAASRKIVEIVARESAPYVGFAAGFESVE 990
KKI V GATG TGKR+V L+ +G V AGVR +KA D LQF+ DV G +LA A+ DAV+ ATGF PS+ D L P KVD GT +++AC V K ++ISS+L NG A GQ LNP Y+ LN FG L+ K +AE ++ +++TI+RPGGLKN PP GNIV DTL+ G+ISR+QVA V VEA++ P A+ K+VEIVAR AP F F S++
Sbjct: 58 KKIFVAGATGNTGKRIVQQLLAKGFAVKAGVRDIDKAKTSFSDGNPDLQFVKADVTEGSTKLAEAIGADSDAVICATGFRPSW--DLLAPWKVDNFGTVNLVEACRKIGVNKFILISSILVNGAAMGQLLNPAYIFLNVFGLTLIAKLQAEQHMRKSG-INYTIIRPGGLKNDPPKGNIVMEPEDTLYEGSISRDQVAEVAVEALIHPEAAYKVVEIVARTEAPKRPFQELFGSIK 290
BLAST of mRNA_P-wetherbeei_contig6945.1.1 vs. uniprot
Match: A0A022R0A2_ERYGU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022R0A2_ERYGU) HSP 1 Score: 196 bits (497), Expect = 1.020e-56 Identity = 119/247 (48.18%), Postives = 156/247 (63.16%), Query Frame = 1
Query: 256 IGEPSEGRFDGKKILVFGATGKTGKRVVMALVGEGANVVAGVRSREKASAELGDAREGLQFLGVDVVCGK-ELAGAVRG-CDAVVIATGFTPSFPPDPLGPLKVDYLGTRRVIDACVDAQVPKLVMISSLLTNGLAAGQGLNPNYLLLNAFGGVLLLKRKAEMYLENQAFLDWTIVRPGGLKNSPPVGNIVFASRDTLFSGAISREQVARVVVEAIVEPAASRKIVEIVARESAPYVGFAAGFESVE 990
I E EG KKI V GATG TGKR+V L+ +G V AGVR +KA + LQF+ DV G +LA A+ DAV+ ATGF PS+ D L P KVD GT +++AC V + +++SS+L NG A GQ LNP Y+ LN FG L+ K +AE Y+ +D+TI+RPGGLKN PP+GNIV DTL++G+ISR+QVA V VEA++ P +S K+VEIVAR AP F F +++
Sbjct: 45 IEEEKEGSSVRKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDVDKAKSTFPGNNPHLQFVKADVTEGSTKLADAISDDSDAVICATGFRPSW--DLLAPWKVDNYGTVNLVEACRKKNVNRFILVSSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAEQYIRKSG-IDYTIIRPGGLKNDPPMGNIVMEPEDTLYAGSISRDQVAEVAVEALLLPESSYKVVEIVARTEAPKRSFDELFGTIK 288
BLAST of mRNA_P-wetherbeei_contig6945.1.1 vs. uniprot
Match: W1PPH5_AMBTC (NAD(P)-bd_dom domain-containing protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PPH5_AMBTC) HSP 1 Score: 194 bits (494), Expect = 2.140e-56 Identity = 113/239 (47.28%), Postives = 153/239 (64.02%), Query Frame = 1
Query: 277 RFDGKKILVFGATGKTGKRVVMALVGEGANVVAGVRSREKASAELGDAREGLQFLGVDVVCGKE-LAGAVRGCDAVVIATGFTPSFPPDPLGPLKVDYLGTRRVIDACVDAQVPKLVMISSLLTNGLAAGQGLNPNYLLLNAFGGVLLLKRKAEMYLENQAFLDWTIVRPGGLKNSPPVGNIVFASRDTLFSGAISREQVARVVVEAIVEPAASRKIVEIVARESAPYVGFAAGFESVE 990
+ +GKK+ V GATG TGK++V L+ +G V AGVR E A + L + + +Q + DV G E LA A+ +AV+ ATGF PS D P KVD GT ++DAC V + +++SS+L NG A GQ LNP Y++LN FG L+ K +AE Y+ + +++TI+RPGGL+N PP G+I S DTLF G+ISREQVA V VEA+ P AS K+VEIV+R AP FA F ++
Sbjct: 44 KLEGKKVFVAGATGMTGKKIVDQLLSKGFQVRAGVRDVESAKSSL-SSNQNIQIVKADVTEGSEKLAEAIGDAEAVICATGFRPSL--DLFAPWKVDNFGTVNLVDACRTVGVNRFILVSSILVNGAAMGQILNPAYIVLNIFGLTLIAKLQAEKYIRSSG-INFTIIRPGGLRNDPPSGSIAMESEDTLFEGSISREQVAEVAVEALRHPEASYKVVEIVSRTEAPKHSFAEMFGHIK 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6945.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6945.1.1 >prot_P-wetherbeei_contig6945.1.1 ID=prot_P-wetherbeei_contig6945.1.1|Name=mRNA_P-wetherbeei_contig6945.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=218bp MALVGEGANVVAGVRSREKASAELGDAREGLQFLGVDVVCGKELAGAVRGback to top mRNA from alignment at P-wetherbeei_contig6945:816..2585+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6945.1.1 ID=mRNA_P-wetherbeei_contig6945.1.1|Name=mRNA_P-wetherbeei_contig6945.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1770bp|location=Sequence derived from alignment at P-wetherbeei_contig6945:816..2585+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6945:816..2585+ >mRNA_P-wetherbeei_contig6945.1.1 ID=mRNA_P-wetherbeei_contig6945.1.1|Name=mRNA_P-wetherbeei_contig6945.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=654bp|location=Sequence derived from alignment at P-wetherbeei_contig6945:816..2585+ (Phaeothamnion wetherbeei SAG_119_79)back to top |