mRNA_P-wetherbeei_contig6853.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6853.1.1 vs. uniprot
Match: D7FXG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG2_ECTSI) HSP 1 Score: 288 bits (738), Expect = 2.740e-84 Identity = 230/463 (49.68%), Postives = 273/463 (58.96%), Query Frame = 1
Query: 22 SVHRCLIFLGDLARYRELHSESQQKDKDWGEAERRYHEALAVVPGSGNPHNQLAVLATYADAECVAVYRYCRSLMVESPFMTARENLSLLFDKNRHKVDEDGGGWWPADDGPSPPAGGAPAGGTLGVATAGGXXVAXXXXXXXXXXXXKGKVKSTGGRGNTGALLKSFLRRFVRLHGILFSGLPEEVKEFAPIHDGAVHDFRTLLSNSAFGDALLLKMVVICIFSVTNAAAPGEISAPTARDMDGTGRGTVLANALALAFGVAAQIGRHVRTQEPTTPPAPHVXXXSGVGAGFAGGGXXXXXXXXXXXSAXAVXXXXXXXXXXXXXXXXXXXSMRDPAGGDAXXXXXXXXXGLGAPSRDSAARETLARADFVDMLCRLCNAMPDPPDGGGSLVDSDMAPLDALGRRRALREHLELRGFLPLAHVYEGRFVFDGPYADGGPDDRAGAVRIRGLKAFARALA-DP 1407
S++RC IFLGDLARYRELH E+ KD W AER YH+ALAV+P SGNPHNQLAVLATY DAECV+VYRYCRSLM++SPF TA ENL+LLF+KN+ K G PA +G GG +T GG X XXX KG GRGNTGALLKSFLRRFVRLHG++FSG E++++F I + A+ DFRTLLSNSAFGDALLLKMVVICIFSVT+ A E + + G + G XXX G A XXXXXX X XXXXXXXXXXXXXXXXXXX+ R A A +E RA + +++ RL + +PD + +D P D LGRRR L+EH+ELRGFLPLA +Y+ R+ DGP PDD AG+VRIRGLKAF A++ DP
Sbjct: 113 SINRCFIFLGDLARYRELHGENSVKD--WSSAERYYHQALAVLPTSGNPHNQLAVLATYTDAECVSVYRYCRSLMIDSPFQTAHENLTLLFEKNKQK-----GFGMPALEGGKESLGGGRE------STGGGGXX---------XXXSKGXXXXXXGRGNTGALLKSFLRRFVRLHGMIFSGKAEDLEDFPSIFETAIADFRTLLSNSAFGDALLLKMVVICIFSVTHVADETETAXXXXXXXXXXXXXXXXDDEAFSNSGGSVVDGXXXXXXXXXXXXXXXXXXXXGTEAAXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRGVA--------------------SVAVQEAEMRAQYWEVVQRLSSTLPDQDP----MNQADAFPGDPLGRRRPLKEHVELRGFLPLADLYKKRYAMDGPAVPAVPDDCAGSVRIRGLKAFCTAVSGDP 521
BLAST of mRNA_P-wetherbeei_contig6853.1.1 vs. uniprot
Match: A0A6H5L3L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3L2_9PHAE) HSP 1 Score: 292 bits (748), Expect = 1.480e-83 Identity = 261/582 (44.85%), Postives = 306/582 (52.58%), Query Frame = 1
Query: 22 SVHRCLIFLGDLARYRELHSESQQKDKDWGEAERRYHEALAVVPGSGNPHNQLAVLATYADAECVAVYRYCRSLMVESPFMTARENLSLLFDKNRHKVDEDGGGWWPADDGPSPPAGGAPAGGTLGVATAGGXXVAXXXXXXXXXXXXKGKVKSTGGRGNTGALLKSFLRRFVRLHGILFSGLPEEVKEFAPIHDGAVHDFRTLLSNSAFGDALLLKMVVICIFSVTNAA----------------------------APGEI---------------------------SAPTARDMDGTGRGTVLANALALAFGVAAQIGRHVRTQEPTTPPAPHVXXXSGVGAGFAGGGXXXXXXXXXXXSAXAVXXXXXXXXXXXXXXXXXXXSMRD--------------------------------PAGGDAXXXXXXXXXGLGAPSR--------------------------------DSAARETLARADFVDMLCRLCNAMPDPPDGGGSLVDSDMAPLDALGRRRALREHLELRGFLPLAHVYEGRFVFDGPYADGGPDDRAGAVRIRGLKAFARALA-DP 1407
S++RC IFLGDLARYREL +S KDW AER YH+ALAV+P SGNPHNQLA+LATY DAECV+VYRYCRSLM+ESPF TA ENL+LLF+KN+ G PA +G GG G + GGXX XXXX KGK K +GGRGNTGALLKSFL+RFVRLHG++FSG E++++F I + A+ DFRTLLSNSAFGDALLLKMVVICIFSVT+ A + G + +A A + R L+ LALAFGV AQIGRHVRTQEPT P G G XXXXXXXXXXX X XXXXXXXXXXXXXXXXXXX P G L A S+ A +E RA F ++ RL + +PD + +D P D LGRRR L+EH+ELRGFLPLA +Y+ R+ DGP PDD AG+VRIRGLKAF A++ DP
Sbjct: 257 SINRCFIFLGDLARYRELLRDSV---KDWSTAERYYHQALAVLPTSGNPHNQLALLATYTDAECVSVYRYCRSLMIESPFQTAHENLTLLFEKNKK------GFGMPALEGGKESRGG-------GRESTGGXXX--------XXXXSKGKGKGSGGRGNTGALLKSFLQRFVRLHGMIFSGKAEDLEDFPSIFETAIADFRTLLSNSAFGDALLLKMVVICIFSVTHVADEMDKAAXXXXXXXXXXXXXXDDEAFSNSGGSVVDGXXXXXXXXXXXXXXXXXXXXXXXAAAAVASKAEEVRRNARLSYPLALAFGVTAQIGRHVRTQEPTHP-------SQGAQQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVVYGVDSKSRPSGNQPQPRPLGSRLLGPVVLFCDWLTARSQFLCIAEEERSVGXXXXXXXXXXXXXXARRGVASVAVQEAEMRAQFWGVVQRLSSTLPDQDP----MNQADAFPGDPLGRRRPLKEHVELRGFLPLADLYKKRYAMDGPAVPAVPDDCAGSVRIRGLKAFCAAVSGDP 803
BLAST of mRNA_P-wetherbeei_contig6853.1.1 vs. uniprot
Match: A0A835Z7T1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T1_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.010e-68 Identity = 130/228 (57.02%), Postives = 151/228 (66.23%), Query Frame = 1
Query: 13 LAQSVHRCLIFLGDLARYRELHSESQQKDKDWGEAERRYHEALAVVPGSGNPHNQLAVLATYADAECVAVYRYCRSLMVESPFMTARENLSLLFDKNRHKVDEDGGGWWPADDGPSPPAGGAPAGGTLGVATAGGXXVAXXXXXXXXXXXXKGKVKSTGGRGNTGALLKSFLRRFVRLHGILFSGLPEEVKEFAPIHDGAVHDFRTLLSNSAFGDALLLKMVVICIFS 696
L+QS+HRCLIF+GDLARYRELHSE+Q D W AE+ Y ALA +P GNPHNQ+AVLATY DAECVAVYRYCRSL++ PFMTARENL+LLF+KN+ K+ E+ A GA +G G + K GGRGNTGALLKSFLRRFVRLHGILFS PE + +F + + DFRTLL SAFGDALLLKMVVIC F+
Sbjct: 155 LSQSIHRCLIFMGDLARYRELHSEAQTPD--WSHAEQYYQRALAAMPHGGNPHNQMAVLATYTDAECVAVYRYCRSLLIRHPFMTARENLALLFEKNKQKLAEE-------------EAAGAASGELRGRTLS--------------------NSKGAGGRGNTGALLKSFLRRFVRLHGILFSADPEGLAQFGGMFSAVICDFRTLLYYSAFGDALLLKMVVICTFT 347
BLAST of mRNA_P-wetherbeei_contig6853.1.1 vs. uniprot
Match: W7U237_9STRA (Telomerase activating protein est1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U237_9STRA) HSP 1 Score: 182 bits (462), Expect = 2.450e-46 Identity = 124/285 (43.51%), Postives = 155/285 (54.39%), Query Frame = 1
Query: 19 QSVHRCLIFLGDLARYRELHSESQQKDKDWGEAERRYHEALAVVPGSGNPHNQLAVLATYADAECVAVYRYCRSLMVESPFMTARENLSLLFDKNRHKVDEDGGGWWPADDGPSPPAGGAPAGGTLGVATAGGXXVAXXXXXXXXXXXXKGKVKSTGGRGNTGALLKSFLRRFVRLHGILFSGLPEEVKEFAPIHDGA--------------VH----DFRTLLSNSAFGDALLLKMVVICIFSVTNAAAPGEISAPTARDMDGTGRGTVLANALALAFGVAAQI 819
+S+HRCLIFLGDLARYRELHSE+ +KD W EAE+ YH A+ +P SGNPHNQLAVLATY +AECVAVYRYCR+++ SPF TA+ENL+LLF+KNR K+ P P +T G + G + +LKSFL RFVRLHGILF + KE + +D +H D R LL SAFGD LLL+MV IC+FSV + G+ A + VL+ L+LA GV A+I
Sbjct: 137 RSIHRCLIFLGDLARYRELHSEATRKD--WTEAEKCYHRAIDTMPTSGNPHNQLAVLATYTEAECVAVYRYCRAVLCASPFPTAKENLALLFEKNRQKI-------------PDP-------------STKDGAQI-LEEEGRIRDGLAAGTITGQQAGIARATMLKSFLLRFVRLHGILFGC--HQRKEASSANDEGGDESMFPTDEALRLLHTTLVDLRQLLKMSAFGDGLLLQMVAICVFSVVTSWREGQDPETVAEESSAQ----VLS--LSLAVGVVAEI 384
BLAST of mRNA_P-wetherbeei_contig6853.1.1 vs. uniprot
Match: A0A3R7NMQ1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NMQ1_9STRA) HSP 1 Score: 155 bits (392), Expect = 6.380e-39 Identity = 105/254 (41.34%), Postives = 129/254 (50.79%), Query Frame = 1
Query: 19 QSVHRCLIFLGDLARYRELHSESQQKDKDWGEAERRYHEALAVVPGSGNPHNQLAVLATYADAECVAVYRYCRSLMVESPFMTARENLSLLFDKNRHKVDEDGGGWWPADDGPSPPAGGAPAGGTLGVATAGGXXVAXXXXXXXXXXXXKGKVKSTGGRGNTGALLKSFLRRFVRLHGILFS-----GLPEEVKEFAPIHDGAVH----------DFRTLLSNSAFGDALLLKMVVICIFSVTNAAAPGEISAP 735
QS+HRC +FLGDLARYRELHS Q+ K++ AE YH ALAV+P +GNPHNQLAVLATY +AE VAVYRYCRSL+ PF+TA ENL+LLF+++R + PP K KST LKS+L R R+HGILF+ G P + I V+ D R+LL GDALLLK+VV IF + A+ SAP
Sbjct: 156 QSLHRCYVFLGDLARYRELHS--QKAKKNFAAAEALYHRALAVLPENGNPHNQLAVLATYIEAETVAVYRYCRSLLTAQPFVTAEENLALLFERSRQRP-------------LVPPV------------------------TFSSSASPTSKEKST--------FLKSYLHRLTRMHGILFALSSPRGSPTAGRSSTSIAAAPVYPRDMEAVLFKDMRSLLHAGVVGDALLLKVVVTNIFCIIRASTSSSPSAP 362
BLAST of mRNA_P-wetherbeei_contig6853.1.1 vs. uniprot
Match: A0A3F2S1P4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1P4_9STRA) HSP 1 Score: 156 bits (394), Expect = 4.110e-37 Identity = 106/254 (41.73%), Postives = 134/254 (52.76%), Query Frame = 1
Query: 19 QSVHRCLIFLGDLARYRELHSESQQKDKDWGEAERRYHEALAVVPGSGNPHNQLAVLATYADAECVAVYRYCRSLMVESPFMTARENLSLLFDKNRHKVDEDGGGWWPADDGPSPPAGGAPAGGTLGVATAGGXXVAXXXXXXXXXXXXKGKVKSTGGRGNTGALLKSFLRRFVRLHGILFS-----GLPEEVKEFAPIHDGAVH----------DFRTLLSNSAFGDALLLKMVVICIFSVTNAAAPGEISAP 735
QS+HRC +FLGDLARYRELHS Q+ K++ AE YH ALAV+P +GNPHNQLAVLATY +AE VAVYRYCRSL+ PF+TA ENL+LLF+++R + +PP T +++ K KS A LKS+L R R+HGILF+ G P + I V+ D R+LL GDALLLK+VV IF + A+ SAP
Sbjct: 156 QSLHRCYVFLGDLARYRELHS--QKAKKNFAAAEALYHRALAVLPENGNPHNQLAVLATYIEAETVAVYRYCRSLLTAQPFVTAEENLALLFERSRQRP-------------LAPPV-------TFSSSSS-----------------PTSKEKS--------AFLKSYLHRLTRMHGILFALSSPRGSPTAGRSSTSIAVAPVYPRDMEAVLFKDMRSLLHAGVVGDALLLKVVVTNIFCIIRASTSSSSSAP 362
BLAST of mRNA_P-wetherbeei_contig6853.1.1 vs. uniprot
Match: A0A6G0X8V0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8V0_9STRA) HSP 1 Score: 154 bits (389), Expect = 4.770e-37 Identity = 99/234 (42.31%), Postives = 128/234 (54.70%), Query Frame = 1
Query: 13 LAQSVHRCLIFLGDLARYRELHSESQQKDKDWGEAERRYHEALAVVPGSGNPHNQLAVLATYADAECVAVYRYCRSLMVESPFMTARENLSLLFDKNRHKVDEDGGGWWPADDGPSPPAGGAPAGGTLGVATAGGXXVAXXXXXXXXXXXXKGKVKSTGGRGNTGALLKSFLRRFVRLHGILFSGLPEEVKEFAPIHDGAVHDFRTLLSNSAFGDALLLKMVVICIFSVTNAAA 714
L S+ RCLIFLGD+ARYRELHS Q+ K++ AE YH AL ++P +GNPHNQLAVLATY +AE +AVYRYCRSL++ PF TA ENLSLLF+++RH+ + SPP K KS A LK+FL R RLHGIL++ +E + DF+ LL+ GDAL+LK+ VI IF +T ++A
Sbjct: 132 LRHSMFRCLIFLGDIARYRELHS--QKAKKNFIAAEGYYHRALQIMPENGNPHNQLAVLATYIEAETIAVYRYCRSLLLPQPFATAEENLSLLFERSRHRALSPTSST--SISAQSPP-----------------------------------KEKS--------AFLKAFLHRLTRLHGILYAPTVDETYPLE-LEASICSDFQALLAAGVLGDALVLKLFVINIFCITRSSA 317
BLAST of mRNA_P-wetherbeei_contig6853.1.1 vs. uniprot
Match: A0A485KJD0_9STRA (Aste57867_8107 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJD0_9STRA) HSP 1 Score: 154 bits (389), Expect = 5.840e-37 Identity = 97/232 (41.81%), Postives = 124/232 (53.45%), Query Frame = 1
Query: 13 LAQSVHRCLIFLGDLARYRELHSESQQKDKDWGEAERRYHEALAVVPGSGNPHNQLAVLATYADAECVAVYRYCRSLMVESPFMTARENLSLLFDKNRHKVDEDGGGWWPADDGPSPPAGGAPAGGTLGVATAGGXXVAXXXXXXXXXXXXKGKVKSTGGRGNTGALLKSFLRRFVRLHGILFSGLPEEVKEFAPIHDGAVHDFRTLLSNSAFGDALLLKMVVICIFSVTNA 708
L S+ RCLIFLGD+ARYRELHS Q+ K++ AE YH AL ++P +GNPHNQLAVLATY +AE +AVYRYCRSL++ PF TA ENL LLF+++RH+ +A K KS A LKSFL R RLHGIL++ +EV + + DF LL+ GDAL+LK+ VI IF ++ A
Sbjct: 130 LRHSMFRCLIFLGDIARYRELHS--QKAKKNFVAAEGYYHRALQIMPENGNPHNQLAVLATYIEAETIAVYRYCRSLLLPQPFSTAEENLVLLFERSRHRP------------------------------------LASSSSTASISASSPPKEKS--------AFLKSFLNRLTRLHGILYAPTADEVYP-SDLETAVCADFAALLAAGVLGDALVLKLFVINIFCISRA 314
BLAST of mRNA_P-wetherbeei_contig6853.1.1 vs. uniprot
Match: D0NT29_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NT29_PHYIT) HSP 1 Score: 155 bits (392), Expect = 6.510e-37 Identity = 108/255 (42.35%), Postives = 136/255 (53.33%), Query Frame = 1
Query: 22 SVHRCLIFLGDLARYRELHSESQQKDKDWGEAERRYHEALAVVPGSGNPHNQLAVLATYADAECVAVYRYCRSLMVESPFMTARENLSLLFDKNRHKVDEDGGGWWPADDGPSPPAGGAPAGGTLGVATAGGXXVAXXXXXXXXXXXXKGKVKSTGGRGNTGALLKSFLRRFVRLHGILF------------SGLPEEVKEFAPIHDGAVH-----DFRTLLSNSAFGDALLLKMVVICIFSVTNAAAPGEISAP 735
S+HRC +FLGDLARYRELHS Q+ K++ AE YH ALAV+P +GNPHNQLAVLATY +AE VAVYRYCRSL+ PF TA ENL+LLF+++R + P A AP T V+++ K KS A LKS+L R R+HGILF SG + P++ + D RTLL GDALLLK++VI IF ++ A+ SAP
Sbjct: 122 SLHRCYVFLGDLARYRELHS--QKAKKNFAAAEALYHRALAVLPENGNPHNQLAVLATYVEAETVAVYRYCRSLLTSQPFTTAEENLALLFERSRQR----------------PLA--API--TFTVSSS-----------------PSSKEKS--------AFLKSYLHRLTRMHGILFALSSPRGSPTASSGTRSNSETATPVYPRDMEAVLFKDMRTLLQAGVVGDALLLKIMVINIFCISRASDSRSPSAP 329
BLAST of mRNA_P-wetherbeei_contig6853.1.1 vs. uniprot
Match: A0A5D6Y8T7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8T7_9STRA) HSP 1 Score: 155 bits (392), Expect = 6.910e-37 Identity = 111/252 (44.05%), Postives = 134/252 (53.17%), Query Frame = 1
Query: 19 QSVHRCLIFLGDLARYRELHSESQQKDKDWGEAERRYHEALAVVPGSGNPHNQLAVLATYADAECVAVYRYCRSLMVESPFMTARENLSLLFDKNRHKVDEDGGGWWPADDGPSPPAGGAPAGGTLGVATAGGXXVAXXXXXXXXXXXXKGKVKSTGGRGNTGALLKSFLRRFVRLHGILF-------SGLPEEV--KEFAPIHDGAVHDFRTLLSNSAFGDALLLKMVVICIFSVTNAAAPGEISAPTARD 747
QS+HRC IFLGDLARYRELHS +K+ + AE YH+ALA+VP +GNPHNQLAVLATY +AE VAVYRYCRSL+ PF TA ENL+LLF++ R + P G AG L A++ + KS ALLKSFL R RLHGILF SG P + +E + D LL A GDALLLK+V+ +F V A G + TA D
Sbjct: 147 QSLHRCFIFLGDLARYRELHSHKAKKN--FAAAEGFYHKALALVPANGNPHNQLAVLATYVEAETVAVYRYCRSLLTAQPFATAEENLALLFERTRQR-----------------PLVGPAAGLALTSASS-------------------ARDKS--------ALLKSFLHRLARLHGILFAAASLSSSGPPSPLYPREMEAL---LFQDLDALLRAGAVGDALLLKVVITNVFCVERARQRGPVG-DTAED 348 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6853.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6853.1.1 >prot_P-wetherbeei_contig6853.1.1 ID=prot_P-wetherbeei_contig6853.1.1|Name=mRNA_P-wetherbeei_contig6853.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=495bp LLPCLAQSVHRCLIFLGDLARYRELHSESQQKDKDWGEAERRYHEALAVVback to top mRNA from alignment at P-wetherbeei_contig6853:302..1999+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6853.1.1 ID=mRNA_P-wetherbeei_contig6853.1.1|Name=mRNA_P-wetherbeei_contig6853.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1698bp|location=Sequence derived from alignment at P-wetherbeei_contig6853:302..1999+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6853:302..1999+ >mRNA_P-wetherbeei_contig6853.1.1 ID=mRNA_P-wetherbeei_contig6853.1.1|Name=mRNA_P-wetherbeei_contig6853.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1485bp|location=Sequence derived from alignment at P-wetherbeei_contig6853:302..1999+ (Phaeothamnion wetherbeei SAG_119_79)back to top |