mRNA_P-wetherbeei_contig6764.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6764.1.3 vs. uniprot
Match: A0A0Q3GN06_BRADI (Uncharacterized protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3GN06_BRADI) HSP 1 Score: 87.0 bits (214), Expect = 2.320e-14 Identity = 56/148 (37.84%), Postives = 79/148 (53.38%), Query Frame = 3
Query: 219 NKLAAAWLLLVIIDGAILFLAMVTALRREL-SSAERDTWVEVTSQVMNALFMVAALATHPSRLRHL-----WLYGTQRALVRKERGHPAAMPD--RLTLHTLLLLNLNNFSQYILAGFMWGYPASTRPVAGVMVPLVVSFSSGAAAGV 638
N W++ V + GAILF+ M L R L + +RDTW EV++Q++NALF + L HP R HL W G AL + P+ + + +LLL+LN F+QY L G GYP S RP GV + + V+ + A AG+
Sbjct: 118 NMALFMWIVAVGVSGAILFMVMTGMLNRALPNKPQRDTWFEVSNQILNALFTLMCLYQHPRRFYHLALLCRWRAGDMLALRETYCKDGSCKPNERKHMMVVILLLHLNCFAQYALCGLNLGYPRSKRPPVGVGLTISVAICAPAVAGL 265
BLAST of mRNA_P-wetherbeei_contig6764.1.3 vs. uniprot
Match: V7AMV3_PHAVU (Uncharacterized protein (Fragment) n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7AMV3_PHAVU) HSP 1 Score: 85.5 bits (210), Expect = 4.190e-14 Identity = 66/196 (33.67%), Postives = 99/196 (50.51%), Query Frame = 3
Query: 66 LASSSMQDTPKFLSLSTFSEGKATEQVHLHLWRRRWEFWALAVKWWHASWTNKLAAAWLLLVIIDGAILFLAMVTALRRELSS-AERDTWVEVTSQVMNALFMVAALATHPSRLRHLWLYGTQRA----LVRKERGHPAAMPDRLTLHTLLLLNLNNFSQYILAGFMWGYPASTRPVAGVMVPLVVSFSSGAAAGV 638
LAS SMQ T EG+ E H ++ W + K W + N W++ V + GAILFL M L + L+ ++R++W+EV +Q +NALF + L HP R HL L + ++RK T L+LL++N F+QY L+G WG+ S RPV GV + + ++ ++ A AGV
Sbjct: 72 LASPSMQKT----------EGRY-EFSHFKIY---WPSLGRSCKKWIKNPLNMALLLWVVCVAVSGAILFLVMTGMLNKILTKQSQRNSWLEVNNQFLNALFTLMCLYQHPKRFHHLVLLCRWKPNDIIILRK------TYSKNDTCKPLVLLHVNCFAQYALSGLNWGFNRSERPVVGVCICISIAIAAPALAGV 247
BLAST of mRNA_P-wetherbeei_contig6764.1.3 vs. uniprot
Match: UPI0009E6447F (uncharacterized protein LOC110020131 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E6447F) HSP 1 Score: 80.5 bits (197), Expect = 2.700e-12 Identity = 58/162 (35.80%), Postives = 77/162 (47.53%), Query Frame = 3
Query: 171 WEFWALAVKWWHASWTNKLAAAWLLLVIIDGAILFLAMVTALRREL-SSAERDTWVEVTSQVMNALFMVAALATHPSRLRHLWLYGTQRA-------LVRKERGHPAAMPDRLTLHTLLLLNLNNFSQYILAGFMWGYPASTRPVAGVMVPLVVSFSSGAAA 632
W+ + K W N WL+ V I GAILF+ M L L ++RD W EV++Q +NALF + L HP R HL L +A ++ + G +L L+LN F+QY L Y S RPVAGV + V+SFSS A A
Sbjct: 103 WDILWVMYKIWIKKPINMALFIWLIGVAISGAILFMVMTGMLNSVLPEKSQRDLWFEVSNQFLNALFTLMCLYQHPKRFHHLALLFRWKAQDVLRLRIIYCKNGMQKFNEKMHIFVVVLFLHLNCFAQYELCVLNLSYSRSNRPVAGVAIGTVISFSSAAIA 264
BLAST of mRNA_P-wetherbeei_contig6764.1.3 vs. uniprot
Match: A0A059BN52_EUCGR (Uncharacterized protein n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059BN52_EUCGR) HSP 1 Score: 79.0 bits (193), Expect = 9.670e-12 Identity = 53/148 (35.81%), Postives = 75/148 (50.68%), Query Frame = 3
Query: 219 NKLAAAWLLLVIIDGAILFLAMVTALRREL-SSAERDTWVEVTSQVMNALFMVAALATHPSRLRHLWLYGTQR----ALVRKERGHPAAMPDRLTLHTL---LLLNLNNFSQYILAGFMWGYPASTRPVAGVMVPLVVSFSSGAAAGV 638
N AW+ +V + GAILFL M L + + +ER+ W EV +Q++NALF + L HP R HL L R + +RK H + +LL++N F+QY L G GY S RP GV + + V+ + A AGV
Sbjct: 115 NMALFAWIFVVAVSGAILFLVMTGMLNKAIPKKSERNAWFEVNNQILNALFTLMCLYQHPKRFYHLVLLCRWRPEDISTLRKIYCKNGTYKPHEWAHMMVVVILLHINCFAQYALCGLNLGYKRSERPALGVGICISVAIGAPAFAGV 262
BLAST of mRNA_P-wetherbeei_contig6764.1.3 vs. uniprot
Match: A0A2I0X932_9ASPA (Uncharacterized protein n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X932_9ASPA) HSP 1 Score: 79.0 bits (193), Expect = 1.420e-11 Identity = 57/175 (32.57%), Postives = 83/175 (47.43%), Query Frame = 3
Query: 135 TEQVHLHLWRR-RWEFWALAVKWWHASWTNKLAAAWLLLVIIDGAILFLAMVTALRREL-SSAERDTWVEVTSQVMNALFMVAALATHPSRLRHLWLYGTQRA----LVRKERGHPAAMPDRLTLH---TLLLLNLNNFSQYILAGFMWGYPASTRPVAGVMVPLVVSFSSGAAA 632
+++ H+ R+ W+ K W N W V I GAILFL M L L ++RDTW EV++Q++NALF + L HP R HL L + ++R +H ++LL+LN F+QY L GYP S RP GV + + ++F + A A
Sbjct: 468 SKRFHISFIRKINWDSLRFMCKTWINDPMNMALFIWFSCVAISGAILFLVMTGMLNDALPEKSQRDTWFEVSNQILNALFTLMCLYQHPKRFYHLALLFRWKTKDVPMLRTIYCKNGMQKPNERMHISVVVVLLHLNCFAQYALCAINLGYPRSKRPAVGVGILISIAFGAAAIA 642
BLAST of mRNA_P-wetherbeei_contig6764.1.3 vs. uniprot
Match: A0A2K3NDI3_TRIPR (Uncharacterized protein n=3 Tax=Trifolium TaxID=3898 RepID=A0A2K3NDI3_TRIPR) HSP 1 Score: 75.5 bits (184), Expect = 1.220e-10 Identity = 54/146 (36.99%), Postives = 73/146 (50.00%), Query Frame = 3
Query: 219 NKLAAAWLLLVIIDGAILFLAMVTALRRELSSAE-RDTWVEVTSQVMNALFMVAALATHPSRLRHLWLY----GTQRALVRKERGHPAAMPDRLTLHTLLLL---NLNNFSQYILAGFMWGYPASTRPVAGVMVPLVVSFSSGAAA 632
N AW+L+V I GAILFL M L + E R+ W EV +Q++NALF + L HP R HL L T +RKE H ++++ ++N F+QY L G GY S RP GV + +SF+ GA A
Sbjct: 122 NMALFAWILVVAISGAILFLVMTGMLNAAIPKKETRNAWFEVNNQILNALFTLMCLYQHPKRFYHLVLLCRWSPTDIIKLRKEYCKNGTYKPHEWTHMMVVVILGHVNCFAQYALCGLNIGYKRSQRPAIGVGI--CISFAIGAPA 265
BLAST of mRNA_P-wetherbeei_contig6764.1.3 vs. uniprot
Match: A0A7J7P426_9MAGN (Uncharacterized protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7P426_9MAGN) HSP 1 Score: 73.2 bits (178), Expect = 6.970e-10 Identity = 56/185 (30.27%), Postives = 87/185 (47.03%), Query Frame = 3
Query: 111 STFSEGKATEQVHLHLWRRRWE-FWALAVKWWHASWTNKLAAAWLLLVIIDGAILFLAMVTALRREL-SSAERDTWVEVTSQVMNALFMVAALATHPSRLRHLWLYGTQR----ALVRKERGHPAAMPDRLTLHTLL---LLNLNNFSQYILAGFMWGYPASTRPVAGVMVPLVVSFSSGAAAGV 638
S+ S G ++ + W+ W + KW N W + V I GAILF+ M+ L + ++R+ W EV +Q++NALF + L +HP R HL L R + +RK H ++ LL++N F+QY L G GY + RP GV + + V+ + A AG+
Sbjct: 99 SSTSRGSLRKRFSTKVREVNWDSMWKMCKKWIRNP-MNMAVLLWGICVAISGAILFMVMIGMLNHAIPKKSQRNAWFEVNNQILNALFTLMCLYSHPKRFYHLVLLCKWRQEDVSRLRKIYCKNGTYKPNEWAHMMVVVVLLHINCFAQYALCGLNLGYRRAQRPPIGVGICISVAIGAPAIAGL 282
BLAST of mRNA_P-wetherbeei_contig6764.1.3 vs. uniprot
Match: G7J2F9_MEDTR (PLAC8 family protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=G7J2F9_MEDTR) HSP 1 Score: 71.6 bits (174), Expect = 1.750e-9 Identity = 46/148 (31.08%), Postives = 76/148 (51.35%), Query Frame = 3
Query: 219 NKLAAAWLLLVIIDGAILFLAMVTALRRELSS-AERDTWVEVTSQVMNALFMVAALATHPSRLRHLWLYGTQRA-------LVRKERGHPAAMPDRLTLHTLLLLNLNNFSQYILAGFMWGYPASTRPVAGVMVPLVVSFSSGAAAGV 638
N AW + V + G ILFL M L L + +ER+TW E+++Q++NALF + +L HP R HL L R+ ++ + G + ++LL++N F+QY + GY S RP + + + V+ ++ A AG+
Sbjct: 110 NMALFAWGICVAVSGEILFLVMTGMLNNVLKTKSERNTWFEISNQILNALFTLMSLYNHPKRFHHLVLLCRWRSNDITTLRMIFCKNGTSKPREWAHMMVVVILLHVNCFAQYAVCSLNLGYKRSERPAIELGIAISVAIAAPATAGL 257
BLAST of mRNA_P-wetherbeei_contig6764.1.3 vs. uniprot
Match: A0A811RGF5_9POAL (Hypothetical protein n=2 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811RGF5_9POAL) HSP 1 Score: 69.3 bits (168), Expect = 1.120e-8 Identity = 50/156 (32.05%), Postives = 78/156 (50.00%), Query Frame = 3
Query: 201 WHASWTNKLAAAWLLLVIIDGAILFLAMVTALRREL-SSAERDTWVEVTSQVMNALFMVAALATHPSRLRHLWLY--------GTQRALVRKERGHPAAMP-DRLTLHTLL-LLNLNNFSQYILAGFMWGYPASTRP--------VAGVMVPLVVS 611
W A+ N WLL V + G + L ++ L ++A+R+ W+E+ +QV+NALF + +L HP+ HL+L RA K+ A P DR + ++ LL++ SQY+L G WGY STRP V G++ P+ +
Sbjct: 89 WIANPMNIALVLWLLCVGVSGGMFVLLLLGLLDGAFPAAADRNRWIEINNQVLNALFTLMSLYQHPALCHHLFLLCRWRPADAAELRADYCKDGAAAAPRPGDRAHIAAVVVLLHVTVVSQYVLCGLYWGYTRSTRPEILEDSFFVLGIVAPVAAA 244
BLAST of mRNA_P-wetherbeei_contig6764.1.3 vs. uniprot
Match: A0A3L6Q3Q6_PANMI (Uncharacterized protein n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6Q3Q6_PANMI) HSP 1 Score: 68.2 bits (165), Expect = 2.100e-8 Identity = 46/141 (32.62%), Postives = 72/141 (51.06%), Query Frame = 3
Query: 237 WLLLVIIDGAILFLAMVTALRRELSS-AERDTWVEVTSQVMNALFMVAALATHPSRLRHLWLYGTQRALVRKE------RGHPAAMPDRLTLHTLL-LLNLNNFSQYILAGFMWGYPASTRP--------VAGVMVPLVVS 611
WLL V + G +L L ++ L + AER+ W+E+ +QV+NALF + +L HP+ HL+L R E +G +R+ + ++ LL+L QY+L G WGY STRP V G++ P+ +
Sbjct: 68 WLLCVAVAGGMLVLLLLGLLDGAFPAPAERNRWIEINNQVLNALFTLMSLYQHPALCHHLFLLCRWRPQDSAELRAAYCKGAAPRAGERVHMAVVVALLHLTVVCQYVLCGLYWGYTKSTRPELAEDGFFVLGIVAPVAAA 208 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6764.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6764.1.3 >prot_P-wetherbeei_contig6764.1.3 ID=prot_P-wetherbeei_contig6764.1.3|Name=mRNA_P-wetherbeei_contig6764.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=349bp MAPRIDFLASSSMQDTPKFLSLSTFSEGKATEQVHLHLWRRRWEFWALAVback to top mRNA from alignment at P-wetherbeei_contig6764:60..2978- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6764.1.3 ID=mRNA_P-wetherbeei_contig6764.1.3|Name=mRNA_P-wetherbeei_contig6764.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2919bp|location=Sequence derived from alignment at P-wetherbeei_contig6764:60..2978- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6764:60..2978- >mRNA_P-wetherbeei_contig6764.1.3 ID=mRNA_P-wetherbeei_contig6764.1.3|Name=mRNA_P-wetherbeei_contig6764.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1047bp|location=Sequence derived from alignment at P-wetherbeei_contig6764:60..2978- (Phaeothamnion wetherbeei SAG_119_79)back to top |