mRNA_P-wetherbeei_contig6728.1.5 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6728.1.5 vs. uniprot
Match: A0A6H5L6M4_9PHAE (EFG_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6M4_9PHAE) HSP 1 Score: 292 bits (748), Expect = 4.660e-84 Identity = 178/314 (56.69%), Postives = 216/314 (68.79%), Query Frame = 1
Query: 25 ADEEVQAIVWRAIGSGATAGFQLASVAGPLAGEEMYGVIFVVESVEITASCV-----------GLEEIAAGAGAXXXXASSGSVGAPPSSSAEFDAAAVVGEVATAAAGDVVTDVAAAVAPRHAASPAVAGGLRQRRPVHPQ--FGPLSGQIISAAKSACRAAFLCCPARLVEAHYRCSLQCDQAQLGNMYAVLSRRRGRVTNEDLVEGTQLFLLDALLPVAESFGFAGELFKRTSGGGTTPQLSFSHWEVVDVDPFWRPLTEEEREDEGEGSHLNATNVARRHIDAVRRRKGLATADKIVMAAEKQRTLTRNK 927
A EE + R I + GFQLA++AGPLAGEE++G+ F++E VEITA C+ XXXX G + P + E + G A+G+ D A+V + + VAG R +P + +GPL+GQIIS + CRA+ LCCP RLVEA YRCSLQCDQ QLGNMYAVLS+RRGRV +EDLVEGTQLFLL ALLPVAESFGFA EL K+TSG GTTPQL+FSHWEV+++DPFWRP TEEEREDEGE HL+ TN+AR+++D VR+RKGLAT DKIV+AAEKQRTLTRNK
Sbjct: 824 ASEEEASEALRLIENSVITGFQLATLAGPLAGEELHGLCFLLEKVEITAECLTSGSSXXXXXXXXXXXXXXXXXXXXXXXXGGDSSSPVTPLEDGSGTGEG---VGASGEGSDDDGASVG-KGSVESGVAGERRGPQPQDQRRRYGPLTGQIISVVRMGCRASMLCCPVRLVEAFYRCSLQCDQLQLGNMYAVLSKRRGRVVDEDLVEGTQLFLLTALLPVAESFGFADELLKKTSGAGTTPQLAFSHWEVMELDPFWRPQTEEEREDEGEEGHLSVTNIARQYLDGVRKRKGLATNDKIVVAAEKQRTLTRNK 1133
BLAST of mRNA_P-wetherbeei_contig6728.1.5 vs. uniprot
Match: A0A7S3XN80_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN80_HETAK) HSP 1 Score: 238 bits (608), Expect = 2.440e-72 Identity = 123/171 (71.93%), Postives = 136/171 (79.53%), Query Frame = 1
Query: 415 QFGPLSGQIISAAKSACRAAFLCCPARLVEAHYRCSLQCDQAQLGNMYAVLSRRRGRVTNEDLVEGTQLFLLDALLPVAESFGFAGELFKRTSGGGTTPQLSFSHWEVVDVDPFWRPLTEEEREDEGEGSHLNATNVARRHIDAVRRRKGLATADKIVMAAEKQRTLTRNK 927
+FGPLSGQIIS K RAA CPARLVEA Y C LQCDQ QLGNMY VL++RRGRVT ED+VEGT LF+L A LPVAESFGFAGEL RTSG T PQL+FSHWEV+D+DPFWRP TEEERED GE + +N ARR+IDAVR RKGLAT +IV+AAEKQRTL R K
Sbjct: 41 RFGPLSGQIISNIKDGVRAAVASCPARLVEAFYSCELQCDQQQLGNMYGVLAKRRGRVTEEDIVEGTALFVLGAALPVAESFGFAGELLTRTSGAATAPQLAFSHWEVIDLDPFWRPTTEEEREDLGE--EVRESNFARRYIDAVRARKGLATDKRIVVAAEKQRTLARKK 209
BLAST of mRNA_P-wetherbeei_contig6728.1.5 vs. uniprot
Match: A0A7S3XMW0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMW0_HETAK) HSP 1 Score: 245 bits (625), Expect = 7.310e-72 Identity = 148/306 (48.37%), Postives = 176/306 (57.52%), Query Frame = 1
Query: 28 DEEVQAIVWRAIGSGATAGFQLASVAGPLAGEEMYGVIFVVESVEITASCV------GLEEIAAGAGAXXXXASSGSVGAPPSSSAEFDAAAVVGEVATAAAGDVVTDVAAAVAPRHAASPAVAGGLRQRRPVHPQFGPLSGQIISAAKSACRAAFLCCPARLVEAHYRCSLQCDQAQLGNMYAVLSRRRGRVTNEDLVEGTQLFLLDALLPVAESFGFAGELFKRTSGGGTTPQLSFSHWEVVDVDPFWRPLTEEEREDEGEGSHLNATNVARRHIDAVRRRKGLATADKIVMAAEKQRTLTRNK 927
+EE A W + +G +GFQLA+ AGP+ E+MYG+ +V +EI + + L+ ++ GA AS +FGPLSGQIIS K RAA CPARLVEA Y C LQCDQ QLGNMY VL++RRGRVT ED+VEGT LF+L A LPVAESFGFAGEL RTSG T PQL+FSHWEV+D+DPFWRP TEEERED GE + +N ARR+IDAVR RKGLAT +IV+AAEKQRTL R K
Sbjct: 195 NEEASA-AWSLVANGIASGFQLATAAGPIMEEQMYGICIIVTKIEIASHLLVSSEEPSLQTLSISEGANIDTAS-------------------------------------------------------------RFGPLSGQIISNIKDGVRAAVASCPARLVEAFYSCELQCDQQQLGNMYGVLAKRRGRVTEEDIVEGTALFVLGAALPVAESFGFAGELLTRTSGAATAPQLAFSHWEVIDLDPFWRPTTEEEREDLGE--EVRESNFARRYIDAVRARKGLATDKRIVVAAEKQRTLARKK 436
BLAST of mRNA_P-wetherbeei_contig6728.1.5 vs. uniprot
Match: A0A7S2AZY7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZY7_9STRA) HSP 1 Score: 193 bits (491), Expect = 9.680e-56 Identity = 97/149 (65.10%), Postives = 115/149 (77.18%), Query Frame = 1
Query: 493 RLVEAHYRCSLQCDQAQLGNMYAVLSRRRGRVTNEDLVEGTQLFLLDALLPVAESFGFAGELFKRTSGGGTTPQLSFSHWEVVDVDPFWRPLTEEEREDEGEGSHL----NATNVARRHIDAVRRRKGLATADKIVMAAEKQRTLTRNK 927
RL+E YRC LQCDQAQLGN+YA+LS+RRG V ++DLVEGT+LFL+ ALLPV ES GF+ EL RTSG TTPQLSFSHW+ ++V PFWRP TE+ERE+ GE TN+ARRHID VRRRKGL +KIV+ AEKQRTL R +
Sbjct: 10 RLIEGFYRCDLQCDQAQLGNLYALLSKRRGIVLDDDLVEGTELFLITALLPVVESLGFSSELLGRTSGAATTPQLSFSHWDAIEVSPFWRPTTEDEREEMGESYSTYDQDRLTNLARRHIDNVRRRKGLLVEEKIVVDAEKQRTLGRAR 158
BLAST of mRNA_P-wetherbeei_contig6728.1.5 vs. uniprot
Match: W7U9X5_9STRA (Elongation factor ef-2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9X5_9STRA) HSP 1 Score: 210 bits (535), Expect = 5.360e-55 Identity = 133/314 (42.36%), Postives = 174/314 (55.41%), Query Frame = 1
Query: 52 WRAIGSGATAGFQLASVAGPLAGEEMYGVIFVVESVEITASCVGLEEIAAGAGAXXXXASSGSVGAPPSSSAEFDAAAVVGEVATAAAGDVVTDVAAAVAPRHAASPAVAGGLRQRRPVHPQFGPLSGQIISAAKSACRAAFLCCPARLVEAHYRCSLQCDQAQLGNMYAVLSRRRGRVTNEDLVEGTQLFLLDALLPVAESFGFAGELFKRTSGGGTTPQLSFSHWEVVDVDPFWRPLTEEEREDEGE--GSHLNATNVARRHIDAVRRRKGLATADKIVMAAEKQRTLTRNK*QQSAFCCCPLVVQFCRGVS 987
W ++ S GFQ+A+ +GPLA E+MYGV F +E +E S +E P S + +A L R G L+GQ+++ K+ACRAAFL P RLVEA + C LQCD+ QLG +Y VLS+RRGRV ED++EGT LF++ ALLPVAESFGFA EL K+TSG T+PQL FSHWE ++V+PFWRP E++RE+ GE GS N +ARR+ID RRRKGL +K+V+ AEKQRTL+R C V++ R V+
Sbjct: 887 WPSLQSSLLVGFQMATSSGPLAEEQMYGVGFAIEKLEFLLSPSDFKETLRDGNEERSCL-------PRLSREDLEA-----------------------------------WLSSR------LGSLTGQVMTLCKTACRAAFLSSPVRLVEAFFECDLQCDRLQLGRLYGVLSKRRGRVIREDILEGTDLFMIKALLPVAESFGFATELLKKTSGAATSPQLFFSHWERMEVNPFWRPQNEDDREEFGETFGSDFN---IARRYIDETRRRKGLQIGEKLVLYAEKQRTLSRKNWGLERETLCYFVLKKTRVVA 1149
BLAST of mRNA_P-wetherbeei_contig6728.1.5 vs. uniprot
Match: A0A7S2RBI4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBI4_9STRA) HSP 1 Score: 191 bits (486), Expect = 5.800e-55 Identity = 101/160 (63.12%), Postives = 122/160 (76.25%), Query Frame = 1
Query: 466 RAAFLCCP-ARLVEAHYRCSLQCDQAQLGNMYAVLSRRRGRVTNEDLVEGTQLFLLDALLPVAESFGFAGELFKRTSGGGTTPQLSFSHWEVVDVDPFWRPLTEEEREDEGEGSHLN-----ATNVARRHIDAVRRRKGLATADKIVMAAEKQRTLTRNK 927
RA L P ARLVE +C LQC+Q QLGN+YA+LS+RRG V +ED++EGT+LFL+ A +PV ES GF+ EL +TSG T PQLSFSHWE + VDPFWRP TE+ERE+ GE S++ TN+ARR+IDAVRRRKGL +KIV AAEKQRTLTRNK
Sbjct: 3 RACLLSSPSARLVEGFVQCDLQCEQDQLGNLYALLSKRRGTVVDEDIIEGTELFLITAQIPVVESIGFSQELLDKTSGAATAPQLSFSHWESMSVDPFWRPTTEDEREEMGE-SYMTYETDRETNIARRNIDAVRRRKGLMVEEKIVAAAEKQRTLTRNK 161
BLAST of mRNA_P-wetherbeei_contig6728.1.5 vs. uniprot
Match: A0A7S2G103_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G103_9STRA) HSP 1 Score: 188 bits (478), Expect = 2.650e-53 Identity = 99/166 (59.64%), Postives = 121/166 (72.89%), Query Frame = 1
Query: 436 QIISAAKSACRAAFLCCPARLVEAHYRCSLQCDQAQLGNMYAVLSRRRGRVTNEDLVEGTQLFLLDALLPVAESFGFAGELFKRTSGGGTTPQLSFSHWEVVDVDPFWRPLTEEEREDEGEGSHL--NATNVARRHIDAVRRRKGLATADKIVMAAEKQRTLTRNK 927
++ A K ACRAA L R+VE RC LQC+ +QLGN+YA L++ RG V ED+VEGT+LF + ALLPV E+ GF+ L K+TSG TTPQLS SHWE ++ DPFWRP T EERE+EGE + N NVAR+ IDAVRRRKGL +KIV+AAEKQRTL+R K
Sbjct: 31 ELSKAMKLACRAALLSGDVRVVEKKLRCDLQCNSSQLGNLYATLAKMRGEVIKEDIVEGTELFSITALLPVTEAQGFSAALLKKTSGAATTPQLSLSHWETLERDPFWRPTTAEEREEEGEEHTIVGNDHNVARKLIDAVRRRKGLPVEEKIVVAAEKQRTLSRAK 196
BLAST of mRNA_P-wetherbeei_contig6728.1.5 vs. uniprot
Match: A0A7S3HQ28_9STRA (Hypothetical protein n=4 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQ28_9STRA) HSP 1 Score: 202 bits (515), Expect = 2.230e-52 Identity = 130/295 (44.07%), Postives = 169/295 (57.29%), Query Frame = 1
Query: 49 VWRAIGSGATAGFQLASVAGPLAGEEMYGVIFVVESVEITASCVGLEEIAAGAGAXXXXASSGSVGAPPSSSAEFDAAAVVGEVATAAAGDVVTDVAAAVAPRHAASPAVAGGLRQRRPVHPQFGPLSGQIISAAKSACRAAFLCCPARLVEAHYRCSLQCDQAQLGNMYAVLSRRRGRVTNEDLVEGTQLFLLDALLPVAESFGFAGELFKRTSGGGTTPQLSFSHWEVVDVDPFWRPLTEEEREDEGEGSHLNAT--NVARRHIDAVRRRKGLATADKIVMAAEKQRTLTRNK 927
+W + S TA F+LA +GPL E ++GV FV+E VE+ A+ SV P + +++A V D+ A+ ++ + +VA L+GQ+IS K A L P R+VE Y+C LQCDQ+QLGN+YAVLS+RRG VTNED++EGT LFLL A LPV SFGFA +L K+TSG GT PQLSFSHW +D DPFWRP TE+E E+ GE + N+ R IDAVR+RKGL +KIV +AEKQRTL + K
Sbjct: 902 LWARLHSACTAAFRLAVESGPLMREPLHGVGFVIEHVEVNAAVCN------------------SVLTPQERAMVYESA-------------VERDLTASAMSINSEAESVASSSXXXSS---SASILTGQLISELKDALHVCMLSLPVRIVEPVYKCDLQCDQSQLGNLYAVLSQRRGSVTNEDIIEGTSLFLLSADLPVHSSFGFAQQLLKKTSGLGTAPQLSFSHWSRIDTDPFWRPTTEDELEEYGEQGLMTGAERNLPRGIIDAVRKRKGLPIEEKIVKSAEKQRTLNKKK 1162
BLAST of mRNA_P-wetherbeei_contig6728.1.5 vs. uniprot
Match: A0A1V9YD84_9STRA (Elongation factor G n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YD84_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.720e-49 Identity = 100/170 (58.82%), Postives = 124/170 (72.94%), Query Frame = 1
Query: 418 FGPLSGQIISAAKSACRAAFLCCPARLVEAHYRCSLQCDQAQLGNMYAVLSRRRGRVTNEDLVEGTQLFLLDALLPVAESFGFAGELFKRTSGGGTTPQLSFSHWEVVDVDPFWRPLTEEEREDEGEGSHLNATNVARRHIDAVRRRKGLATADKIVMAAEKQRTLTRNK 927
+GPLSGQ+IS KS CR+AFL P RLVEA Y+CS+QC QLG +Y+V +RRR RV +E+L +G+ LF ++A LPV ESFGFA EL K TSG + PQL F HW +D DPF++P TEEERED GE + N R+ I+ VR+RKGLA +KIV+ AEKQRTL RNK
Sbjct: 830 YGPLSGQVISTMKSGCRSAFLHQPVRLVEAMYKCSVQCQSEQLGKLYSVFARRRARVVSEELTDGSALFSVEAYLPVVESFGFATELLKSTSGNASNPQLLFDHWATMDEDPFFQPTTEEEREDFGET--IAEHNAVRKLIEGVRKRKGLAREEKIVVHAEKQRTLGRNK 997
BLAST of mRNA_P-wetherbeei_contig6728.1.5 vs. uniprot
Match: A0A8K1FMY3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMY3_PYTOL) HSP 1 Score: 190 bits (482), Expect = 4.030e-48 Identity = 98/171 (57.31%), Postives = 129/171 (75.44%), Query Frame = 1
Query: 415 QFGPLSGQIISAAKSACRAAFLCCPARLVEAHYRCSLQCDQAQLGNMYAVLSRRRGRVTNEDLVEGTQLFLLDALLPVAESFGFAGELFKRTSGGGTTPQLSFSHWEVVDVDPFWRPLTEEEREDEGEGSHLNATNVARRHIDAVRRRKGLATADKIVMAAEKQRTLTRNK 927
+FGPLSGQ+IS+ +SACRAAF+ P RLVEA Y C++QC QLG +Y V ++RRG V +E+L +G+ LF + A LPV ESFGFA EL +TSG + PQL FSHW+++D+DPF++P TEEERED GE + N R++I+AVR+RKGLA +KIV+ AEKQRTL R +
Sbjct: 880 KFGPLSGQVISSMRSACRAAFVKQPTRLVEAVYECTVQCLSEQLGKLYTVFAKRRGDVFSEELSDGSALFTIKAHLPVVESFGFATELLIQTSGAASNPQLVFSHWQLMDMDPFFQPQTEEEREDFGE--RIYEHNYVRKYIEAVRKRKGLARDEKIVVHAEKQRTLARKR 1048 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6728.1.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6728.1.5 >prot_P-wetherbeei_contig6728.1.5 ID=prot_P-wetherbeei_contig6728.1.5|Name=mRNA_P-wetherbeei_contig6728.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=268bp MYGVIFVVESVEITASCVGLEEIAAGAGAGASAASSGSVGAPPSSSAEFDback to top mRNA from alignment at P-wetherbeei_contig6728:886..3048+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6728.1.5 ID=mRNA_P-wetherbeei_contig6728.1.5|Name=mRNA_P-wetherbeei_contig6728.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2163bp|location=Sequence derived from alignment at P-wetherbeei_contig6728:886..3048+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6728:886..3048+ >mRNA_P-wetherbeei_contig6728.1.5 ID=mRNA_P-wetherbeei_contig6728.1.5|Name=mRNA_P-wetherbeei_contig6728.1.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=804bp|location=Sequence derived from alignment at P-wetherbeei_contig6728:886..3048+ (Phaeothamnion wetherbeei SAG_119_79)back to top |