mRNA_P-wetherbeei_contig6697.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6697.1.1 vs. uniprot
Match: D7G3H0_ECTSI (Globin, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H0_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 8.420e-19 Identity = 60/167 (35.93%), Postives = 85/167 (50.90%), Query Frame = 3
Query: 720 AVTAEFTSVALLLSFDEKQDFEDFLAAEYAAENLWFWRAAMTYRTTSYGTPVARREAALEIYNTFVKVDAPTPVNIPEGCIMDISACLSADLGPNAHLPAPAPGSPAAMSALAAXXXXXXXXXXXXXXXADRNVFDRALVHVEQIMGCGPFPRFAARSAQHIRDSWK 1220
++TA F+SVA+LL FD + F+ L EYAAENLWFW+ M +R+T + RRE A I++TF+ VD+P VNI D+ A L PG+ A + L FD ALV VE ++ GPFPRF + + + ++ SW+
Sbjct: 423 SLTAAFSSVAILLRFDGEAGFDKHLEMEYAAENLWFWKQGMKFRSTQFEETARRREEARRIFDTFLAVDSPDQVNISHEDREDVLAALENR-----------PGAQAVGAGL----------------------FDEALVQVENMLVLGPFPRFVSVTVETVKTSWQ 556
BLAST of mRNA_P-wetherbeei_contig6697.1.1 vs. uniprot
Match: A0A2M8HMP8_9LEPT (Cell division protein n=1 Tax=Leptospira sp. TaxID=178 RepID=A0A2M8HMP8_9LEPT) HSP 1 Score: 66.2 bits (160), Expect = 9.200e-10 Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = 3
Query: 291 EDTADSLIGKGAVLAGSLAATGLLRVDGTLEGRLAIPGGSVAVGKTGVIDTDIKGARNVIIDSGLVKGSIRAVT-IVLLGTTHVEGDIICDHYHADPGTKVDGSLTV 608
E +S+IG+GA G +GL+R+DG +G + I G V VG++G++DTDI+ V++ G VKG+I A + LL T + GDI+ + G GS T+
Sbjct: 9 EFAVNSIIGEGAEFTGEFKLSGLIRIDGIFKGVI-ITDGKVLVGRSGIVDTDIR--AKVVVAGGEVKGNIYATERVTLLSTCKLNGDIVTPRLIIEEGVVFHGSCTI 112
BLAST of mRNA_P-wetherbeei_contig6697.1.1 vs. uniprot
Match: A0A2M9Y5S3_9LEPT (Cell division protein n=26 Tax=Leptospira TaxID=171 RepID=A0A2M9Y5S3_9LEPT) HSP 1 Score: 63.5 bits (153), Expect = 7.970e-9 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 3
Query: 303 DSLIGKGAVLAGSLAATGLLRVDGTLEGRLAIPGGSVAVGKTGVIDTDIKGARNVIIDSGLVKGSIRAVT-IVLLGTTHVEGDIICDHYHADPGTKVDGSLTV 608
+S+IG+GA G GL+R+DG G L G V +GK+G++DTDIK V++ G ++G+I A + LL + +EGDI+ + G G T+
Sbjct: 13 NSIIGEGAEFVGEFKFPGLIRIDGKFRGVLETTG-KVLIGKSGIVDTDIK--ARVVVAGGEIRGNIYATERVTLLSSCRLEGDIVTPRLIVEEGVVFHGKCTI 112
BLAST of mRNA_P-wetherbeei_contig6697.1.1 vs. uniprot
Match: A0A4R9LPF8_9LEPT (Polymer-forming cytoskeletal protein n=2 Tax=Leptospira TaxID=171 RepID=A0A4R9LPF8_9LEPT) HSP 1 Score: 62.8 bits (151), Expect = 1.420e-8 Identity = 36/103 (34.95%), Postives = 58/103 (56.31%), Query Frame = 3
Query: 303 DSLIGKGAVLAGSLAATGLLRVDGTLEGRLAIPGGSVAVGKTGVIDTDIKGARNVIIDSGLVKGSIRAVT-IVLLGTTHVEGDIICDHYHADPGTKVDGSLTV 608
+S+IG+GA G +GL+R+DG G L G V +GKTG++DTDI+ V++ G ++G+I A + LL + +EGD++ + G G T+
Sbjct: 13 NSVIGEGAEFNGEFKFSGLIRIDGRFRGVLETDG-KVLIGKTGIVDTDIR--AKVVVAGGEIRGNIFATERVTLLSSCRLEGDVVTPRLIVEEGVVFHGKCTI 112
BLAST of mRNA_P-wetherbeei_contig6697.1.1 vs. uniprot
Match: A0A2P2E3D7_9LEPT (Cell shape determination protein n=2 Tax=Leptospira TaxID=171 RepID=A0A2P2E3D7_9LEPT) HSP 1 Score: 62.8 bits (151), Expect = 1.490e-8 Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 3
Query: 303 DSLIGKGAVLAGSLAATGLLRVDGTLEGRLAIPGGSVAVGKTGVIDTDIKGARNVIIDSGLVKGSIRAVT-IVLLGTTHVEGDIICDHYHADPGTKVDGSLTV 608
+S+IG+GA G GL+R+DG G L G V +GK+G++DTDIK V++ G ++G+I A + LL + +EGDI+ + G G T+
Sbjct: 13 NSVIGEGAEFTGEFKFPGLIRIDGKFRGVLETEG-KVLIGKSGIVDTDIK--ARVVVAGGEIRGNIYATERVTLLSSCRLEGDIVTPRLIVEEGVIFHGKCTI 112
BLAST of mRNA_P-wetherbeei_contig6697.1.1 vs. uniprot
Match: A0A1Y6K164_9CHLR (Uncharacterized protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A1Y6K164_9CHLR) HSP 1 Score: 59.3 bits (142), Expect = 4.590e-7 Identity = 42/126 (33.33%), Postives = 67/126 (53.17%), Query Frame = 3
Query: 267 PDDVMKLLEDTADSLIGKGAVLAGSLAATGLLRVDGTLEGRLAIPGGSVAVGKTGVIDTDIKGARNVIIDSGLVKGSIRAVTIVLLGTTHVEGDIICDHYHADPGTKVDGSLTVKVP-DVPALPGD 641
PD + D S++G G G L G +R++G LEG +A+ G V VG+TG + ++ A VI+ +GLV G I A + + T V GD++ D G + G++T++ D+ LPG+
Sbjct: 9 PDIISARPVDRVTSVLGPGISWKGDLRGKGGVRIEGALEGEVAVRG-MVIVGETGKVTCEVLKAGTVIV-AGLVSGQIIAEKLEIRATGRVYGDVVIQSISTDEGAFLRGTVTMEERVDLSDLPGE 132
BLAST of mRNA_P-wetherbeei_contig6697.1.1 vs. uniprot
Match: A0A1G0AUJ9_9FIRM (Uncharacterized protein n=1 Tax=Firmicutes bacterium RBG_13_65_8 TaxID=1798012 RepID=A0A1G0AUJ9_9FIRM) HSP 1 Score: 57.4 bits (137), Expect = 1.590e-6 Identity = 37/107 (34.58%), Postives = 64/107 (59.81%), Query Frame = 3
Query: 303 DSLIGKGAVLAGSLAATGLLRVDGTLEGRLAIPGGSVAVGKTGVIDTDIKGARNVIIDSGLVKGSIRAV-TIVLLGTTHVEGDIICDHYHADPGTKVDGSLTVKVPD 620
D++IG+ A L G++ ++GL+R+DG ++G + + G +A+G++G I ++K A NV + +G+V G+I A + LL T V GD+ G GS +K P+
Sbjct: 17 DTIIGRDAQLKGTVVSSGLIRIDGKVDGEI-VHKGDIAIGESGEITANVK-AHNVTV-AGVVNGNIEATGKLELLPTARVTGDLSVATLVVGEGAIFKGSSDMKAPE 120
BLAST of mRNA_P-wetherbeei_contig6697.1.1 vs. uniprot
Match: A0A496SYP6_9BACT (Cell shape determination protein CcmA n=2 Tax=unclassified Candidatus Latescibacteria TaxID=910046 RepID=A0A496SYP6_9BACT) HSP 1 Score: 55.8 bits (133), Expect = 5.500e-6 Identity = 33/84 (39.29%), Postives = 58/84 (69.05%), Query Frame = 3
Query: 303 DSLIGKGAVLAGSLAATGLLRVDGTLEGRLAIPGGSVAVGKTGVIDTDIKGARNVIIDSGLVKGSIRAVT-IVLLGTTHVEGDI 551
+++IGKG+ L G+ + + LRVDG+++G+L + G S+AVGK GVI+ DIK + + +G + G++ A +VL T+ ++GD+
Sbjct: 10 NTIIGKGSSLEGTFSISSSLRVDGSIKGKLTV-GDSLAVGKGGVIEADIKTKKATV--AGKIIGTLEASERVVLESTSTLQGDL 90
BLAST of mRNA_P-wetherbeei_contig6697.1.1 vs. uniprot
Match: A0A1M7GP73_9FIRM (Protein CcmA, bactofilin family n=1 Tax=Caldanaerovirga acetigignens TaxID=447595 RepID=A0A1M7GP73_9FIRM) HSP 1 Score: 53.9 bits (128), Expect = 2.220e-5 Identity = 38/104 (36.54%), Postives = 62/104 (59.62%), Query Frame = 3
Query: 270 DDVMKLLEDTADSLIGKGAVLAGSLAATGLLRVDGTLEGRLAIPGGSVAVGKTGVIDTDIKGARNVIIDSGLVKGSIRAVTIV-------LLGTTHVEGDIICD 560
++ +K+ + D+LIGKG + G++ ATG+LR++G +EG L G + V +TGV++ +K ARN +I +G V G+I + +LG VEG I+ D
Sbjct: 6 NEKIKVNPEAVDTLIGKGTEIKGTVKATGVLRIEGKVEGELESTG-DIIVAETGVVNAQLK-ARNAVI-AGEVNGNIFLSGKLEIKSSGKVLGDLRVEGIIVED 106
BLAST of mRNA_P-wetherbeei_contig6697.1.1 vs. uniprot
Match: A0A140L767_9FIRM (Uncharacterized protein n=1 Tax=Fervidicola ferrireducens TaxID=520764 RepID=A0A140L767_9FIRM) HSP 1 Score: 53.5 bits (127), Expect = 3.030e-5 Identity = 29/77 (37.66%), Postives = 52/77 (67.53%), Query Frame = 3
Query: 270 DDVMKLLEDTADSLIGKGAVLAGSLAATGLLRVDGTLEGRLAIPGGSVAVGKTGVIDTDIKGARNVIIDSGLVKGSI 500
++ +K+ + D+LIGKG + G++ ATG+LR++G +EG L G + + +TGV++ +K ARN +I +G V G++
Sbjct: 6 NEEIKINPEAVDTLIGKGTEIKGTIRATGVLRIEGRIEGELESTG-DIIIAETGVVNAQLK-ARNAVI-AGEVNGNV 79 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6697.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6697.1.1 >prot_P-wetherbeei_contig6697.1.1 ID=prot_P-wetherbeei_contig6697.1.1|Name=mRNA_P-wetherbeei_contig6697.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=356bp MLKMGKSTKSPPTSSSPTRRMAWGPGAGAGGPDDVMKLLEDTADSLIGKGback to top mRNA from alignment at P-wetherbeei_contig6697:562..2926- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6697.1.1 ID=mRNA_P-wetherbeei_contig6697.1.1|Name=mRNA_P-wetherbeei_contig6697.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2365bp|location=Sequence derived from alignment at P-wetherbeei_contig6697:562..2926- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6697:562..2926- >mRNA_P-wetherbeei_contig6697.1.1 ID=mRNA_P-wetherbeei_contig6697.1.1|Name=mRNA_P-wetherbeei_contig6697.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1068bp|location=Sequence derived from alignment at P-wetherbeei_contig6697:562..2926- (Phaeothamnion wetherbeei SAG_119_79)back to top |