mRNA_P-wetherbeei_contig6655.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6655.3.2 vs. uniprot
Match: A0A6H5KYB6_9PHAE (EXS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB6_9PHAE) HSP 1 Score: 221 bits (563), Expect = 1.240e-67 Identity = 119/225 (52.89%), Postives = 149/225 (66.22%), Query Frame = 1
Query: 1 CFFFSGDYMLSPAAFAARGNRWWESKLMRRVVVPALCVWPLELRLLQCLRRHADTGKRVPHLLNALKYIMAMVVSLFGVFQADNSSDTTDGSMGWQKGIWLALYVASSLYSFFWDVRFDWGQDQVLFKGRLAKRRMFSKRWVYHAAIWLDLALRFNWLYSFIPPGLTAFGLL-PATLPVYATTFVAI-EMLRRTMWGFFRLEHEHLRNTEGYRRSDDVVPLHFTT 669
CFF SGD++L+ + +G W S + +V+PALCV PL LR QC+RR+ DT KR PHL N LKY M+ V+LFGVF +S+ T K +W +YV S+LY+F WDV DWG ++ G L K+R+F + VY+AA+ LDL LRFNWLYS IPPG + +TLPV TT V + E LRRTMWGFFR+E+EHL NTEGYR S D VPLHFTT
Sbjct: 110 CFFLSGDFLLNLEDYHRKGLSWQHSAVYVNLVIPALCVLPLWLRFQQCVRRYHDTQKRFPHLANCLKYSMSFTVALFGVFSPPHSTTTA------VKILWFVMYVVSTLYTFSWDVLQDWGLGHPMY-GFLRKKRLFPRSSVYYAAVVLDLVLRFNWLYSLIPPGHNPLPFMHSSTLPVVITTNVIVCEFLRRTMWGFFRVENEHLNNTEGYR-STDHVPLHFTT 326
BLAST of mRNA_P-wetherbeei_contig6655.3.2 vs. uniprot
Match: A0A835ZE89_9STRA (EXS family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE89_9STRA) HSP 1 Score: 223 bits (569), Expect = 1.600e-64 Identity = 125/227 (55.07%), Postives = 154/227 (67.84%), Query Frame = 1
Query: 4 FFFSGDYMLSPAAFAAR--GNRWWESKLMRRVVVPALCVWPLELRLLQCLRRHADTGKRVPHLLNALKYIMAMVVSLFGVFQADNSSDTTDGSMGWQKGIWLALYVASSLYSFFWDVRFDWGQDQVLFKGRLAKRRMFSKRWVYHAAIWLDLALRFNWLYSFIPPGLTAFGLLPATLPVYATTFVA-IEMLRRTMWGFFRLEHEHLRNTEGYRRSDDVVPLHFTTVR 675
FF SGD+++ + AR N W + V+VPALCV PL LR QCLRR+ DTGKR P+L NALKY MA VS+FGVF+ + T D GIW+ALY+ SSLYSF+WD++ DWG G L++RRM S+ WVY A I +DL LRFNWLYSFIPPG + F ++P Y TT V +E+ RRT+WGFFRLE+EHLRNTEGYR + DVVPLHF T +
Sbjct: 591 FFLSGDFLMDRHVWMARHKSNSWEQQFWYVSVLVPALCVLPLWLRFQQCLRRYHDTGKRFPNLANALKYAMAQTVSIFGVFRPP--APTIDV----YNGIWMALYIVSSLYSFWWDIKQDWGLGHRK-HGWLSERRMHSRVWVYWATIAVDLILRFNWLYSFIPPGTSHFFIVPN----YVTTVVIMLEIFRRTLWGFFRLENEHLRNTEGYR-TIDVVPLHFHTAK 805
BLAST of mRNA_P-wetherbeei_contig6655.3.2 vs. uniprot
Match: A0A7S0AKD0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AKD0_9STRA) HSP 1 Score: 170 bits (430), Expect = 9.530e-48 Identity = 101/235 (42.98%), Postives = 132/235 (56.17%), Query Frame = 1
Query: 1 CFFFSGDYMLSPAAFAARGNRWWESKLM-RRVVVPALCVWPLELRLLQCLRRHADTGKRVPHLLNALKYIMAMVVSLFGVFQAD---NSSDTTDGSMGWQKG-------IWLALYVASSLYSFFWDVRFDWGQDQVLFKGRLAKRRMFSKRWVYHAAIWLDLALRFNWLYSFIPPGLTAFGLLPATLPVYATTF-VAIEMLRRTMWGFFRLEHEHLRNTEGYRRSDDVVPLHFTT 669
C+ SGD+ S W+ + + V++P +C++PL +R QCLRR+ DT KR P+L NA KY M+ V+LFG F +S +T K W+ L++ASSLYSF WDV DWG + F L R MF ++ Y+ + DL LRF W+ S IPP A LP Y T +A+E+LRRT+WGFFRLEHEH NTEG+RR D VPLHF T
Sbjct: 92 CYVLSGDFWFSENENNDIDPHQWQHEFWYKNVLIPLVCLFPLWIRFNQCLRRYMDTKKRFPNLANATKYAMSQTVTLFGAFHPIYLLHSHETKHHKYVVSKDDINVFQEFWMGLFIASSLYSFSWDVLMDWGLGRPEFSF-LGPRLMFPNKFYYYGVMAADLVLRFMWVQSLIPPQSGA----SFELPSYLTAITMALELLRRTLWGFFRLEHEHRHNTEGFRRVD-FVPLHFAT 320
BLAST of mRNA_P-wetherbeei_contig6655.3.2 vs. uniprot
Match: A0A7S2KW14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KW14_9STRA) HSP 1 Score: 170 bits (430), Expect = 2.580e-47 Identity = 100/245 (40.82%), Postives = 139/245 (56.73%), Query Frame = 1
Query: 1 CFFFSGDYMLSPAAFAARGN--RWWESKLMRRVVVPALCVWPLELRLLQCLRRHADTGKRVPHLLNALKYIMAMVVSLFGVFQ-------------ADNSSDTTDGS-MGWQKGI------WLALYVASSLYSFFWDVRFDWGQDQVLFKGRLAKRRMFSKRWVYHAAIWLDLALRFNWLYSFIPPGLTAFGLLPATLPVYATTFVAIEMLRRTMWGFFRLEHEHLRNTEGYRRSDDVVPLHFTT 669
CF SGD+++S AA + W + + + +P +C++PL LR QCLRR+ DTGKR P+L NA KY M+ V+LFG F S D +G + + G+ W+ L+++SSLYS+ WDV DWG + + G L R MF ++ Y + + DL LRF W+ + IPP A LPA L + + +E+ RRT+W FFRLEHEH +NT+GYRR VVPLHF T
Sbjct: 169 CFVASGDWLISDKQHAAMHHVHAWSDQLWYKNIAIPLICLFPLWLRFNQCLRRYMDTGKRFPNLANAFKYAMSQAVTLFGAFHPLYLMHERNEHYDVSLSDDDEEGIVLSSRHGVNLFQIFWMGLFISSSLYSYIWDVYMDWGLGRREY-GFLGPRLMFPRKSHYFSVMAADLILRFMWVLTLIPPQSGAKFELPAYLSAIS---MVLELFRRTIWSFFRLEHEHRQNTDGYRRVG-VVPLHFNT 408
BLAST of mRNA_P-wetherbeei_contig6655.3.2 vs. uniprot
Match: A0A7S4MNN5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MNN5_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.580e-46 Identity = 98/237 (41.35%), Postives = 135/237 (56.96%), Query Frame = 1
Query: 1 CFFFSGDYMLSPAAFAARGNRWWESKLM-RRVVVPALCVWPLELRLLQCLRRHADTGKRVPHLLNALKYIMAMVVSLFGVFQA-----DNSSDTTDGSMGWQKG-------IWLALYVASSLYSFFWDVRFDWGQDQVLFKGRLAKRRMFSKRWVYHAAIWLDLALRFNWLYSFIPPGLTAFGLLPATLPVYATTF-VAIEMLRRTMWGFFRLEHEHLRNTEGYRRSDDVVPLHFTT 669
CF FSG+++ + W+ + V++P +C++PL +R QCLRR+ DTGKR P+L NA KY M+ V+LFG F N + + + W+ L++ SSLYSF WDV DWG + ++G L R MF R Y+ I +DL LRF W+ + +PP A LP Y T +++E++RRT+WGFFRLEHEH NTEGYRR D VPLHF+T
Sbjct: 603 CFVFSGNFLQPENLKTDKSPHPWQHAFWYKNVMIPLICLFPLWIRFNQCLRRYTDTGKRWPNLANAFKYAMSQTVTLFGAFHPLYMLHMNKKMLYEAEIALESNANNIFQVFWMGLFICSSLYSFTWDVYMDWGLGKPQYQG-LGPRLMFPNRLHYYGVIVIDLVLRFMWVSTLLPPQSGA----SFELPQYLTALTMSLELMRRTLWGFFRLEHEHRANTEGYRRVD-FVPLHFST 833
BLAST of mRNA_P-wetherbeei_contig6655.3.2 vs. uniprot
Match: A0A1Z5JJL2_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJL2_FISSO) HSP 1 Score: 169 bits (429), Expect = 5.850e-45 Identity = 93/222 (41.89%), Postives = 130/222 (58.56%), Query Frame = 1
Query: 4 FFFSGDYMLSPAAFAARGNRWWESKLMRRVVVPALCVWPLELRLLQCLRRHADTGKRVPHLLNALKYIMAMVVSLFGVFQADNSSDTTDGSMGWQKGIWLALYVASSLYSFFWDVRFDWGQDQVLFKGRLAKRRMFSKRWVYHAAIWLDLALRFNWLYSFIPPGLTAFGLLPATLPVYATTFVAIEMLRRTMWGFFRLEHEHLRNTEGYRRSDDVVPLHFTT 669
F SGD+++S + A + W + +++++P L + PL R QCLRR+ DTG R PHL NA KY + V+LFG F ++ + ++ + W +V+SSLYSFFWDV DWG + F+ L R M+ +R +Y I LDL LRF W+ + +PP A LPA L + + +E+ RRT+WGF RLE+EH NT GYRR VPLHF T
Sbjct: 570 FMLSGDFLISEDSKRATNHTWSHASWYKQILIPLLTLAPLWFRFNQCLRRYMDTGNRFPHLANAFKYALTQTVTLFGAFHPLYMTNKHESALF--QLFWTCAFVSSSLYSFFWDVYMDWGLGRPEFRF-LGPRLMYPRRKLYFVIIGLDLVLRFAWVLTLVPPESGAAFALPAYLTAVS---MMLELFRRTVWGFLRLENEHRSNTAGYRRVG-FVPLHFAT 784
BLAST of mRNA_P-wetherbeei_contig6655.3.2 vs. uniprot
Match: A0A7S2IFQ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IFQ0_9STRA) HSP 1 Score: 158 bits (400), Expect = 7.230e-45 Identity = 90/205 (43.90%), Postives = 120/205 (58.54%), Query Frame = 1
Query: 127 LRLLQCLRRHADTGKRVPHLLNALKYIMAMVVSLFGVFQ----------------ADNSSDTTDGSMGW-QKGI------WLALYVASSLYSFFWDVRFDWGQDQVLFKGRLAKRRMFSKRWVYHAAIWLDLALRFNWLYSFIPPGLTAFGLLPATLPVYATTF-VAIEMLRRTMWGFFRLEHEHLRNTEGYRRSDDVVPLHFTT 669
+R QCLR++ADTG+R PHL NA KY M+ V+LFG F D D G+ +KG+ W+ ++++SSLYSFFWDV DWG + + L R MF KR Y+ I++DL LRF W+ + +PP A +P Y + F +++E+ RRT+WGFFRLEHEH NTEGYRR D VPLHF+T
Sbjct: 2 IRFSQCLRKYADTGQRFPHLANAFKYAMSQTVTLFGAFHPLYLLTQRKHYITVSYGDGLDDDEVGTTRLIRKGVDLFQIFWVGIFISSSLYSFFWDVYMDWGLGRPNHRF-LGPRLMFPKRIYYYGVIFVDLFLRFMWVLTLVPPNTGA----SFEIPHYLSAFTMSVELFRRTLWGFFRLEHEHRHNTEGYRRVD-FVPLHFST 200
BLAST of mRNA_P-wetherbeei_contig6655.3.2 vs. uniprot
Match: A0A5D6XES5_9STRA (EXS domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XES5_9STRA) HSP 1 Score: 159 bits (402), Expect = 6.030e-44 Identity = 92/194 (47.42%), Postives = 119/194 (61.34%), Query Frame = 1
Query: 91 VVVPALCVWPLELRLLQCLRRHADTGKRVPHLLNALKYIMAMVVSLFGVFQADNSSDTTDGSMGWQ--KGIWLALYVASSLYSFFWDVRFDWGQDQVLFKGRLAKRRMFSKRWVYHAAIWLDLALRFNWLYSFIPPGLTAFGLLPATLPVYATTFVAI-EMLRRTMWGFFRLEHEHLRNTEGYRRSDDVVPLHF 663
+VVP +C PL R LQ LRR DTG P+L NA KY +A VV+LFG+F + D+ DGS Q + W+ L+ SSLY++ WDV DWG K L+ R+MFS+ WVY+ AI DL LRF W S +PP + LP+Y F + E+ RRT W FFRLE+EHLRNT+G+RR D +PLH+
Sbjct: 103 IVVPLICALPLWWRFLQSLRRIYDTGTWWPNLPNAFKYALAQVVALFGLFHPFYAGDS-DGSGHLQAFQVTWVVLFALSSLYTWVWDVTMDWGLGHPEHKF-LSDRQMFSRTWVYYVAIVADLFLRFAWTLSLVPPQSSRM------LPLYLQPFTMVAELFRRTFWSFFRLENEHLRNTQGFRRVD-FIPLHY 287
BLAST of mRNA_P-wetherbeei_contig6655.3.2 vs. uniprot
Match: M4BZZ9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BZZ9_HYAAE) HSP 1 Score: 164 bits (416), Expect = 6.100e-44 Identity = 95/196 (48.47%), Postives = 121/196 (61.73%), Query Frame = 1
Query: 91 VVVPALCVWPLELRLLQCLRRHADTGKRVPHLLNALKYIMAMVVSLFGVFQADNSSDTTDGSMGWQKG----IWLALYVASSLYSFFWDVRFDWGQDQVLFKGRLAKRRMFSKRWVYHAAIWLDLALRFNWLYSFIPPGLTAFGLLPATLPVYATTF-VAIEMLRRTMWGFFRLEHEHLRNTEGYRRSDDVVPLHF 663
VVVP +CV PL R LQ LRR DT PHL NA KY +A VV LFG+F S D+ + ++ +WL L+ ASSLY++ WDV DWG + FK L +MFS++WVY+AAI DL LRF W + IPP A LP+Y F + +E+ RRT W FFRLE+EHLRNT+G+RR D +PLH+
Sbjct: 361 VVVPLVCVLPLWWRFLQNLRRVYDTKTWWPHLPNAAKYALAQVVVLFGLFHPLYSDDSDETTLHMHVRMFVVVWLFLFTASSLYTWIWDVTMDWGLGRPQFKF-LGDSQMFSRKWVYYAAIVADLFLRFAWTVTLIPPRGAA-----RWLPLYLQPFTIVLELFRRTFWSFFRLENEHLRNTQGFRRVD-FIPLHY 549
BLAST of mRNA_P-wetherbeei_contig6655.3.2 vs. uniprot
Match: A0A7S0F4Z2_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F4Z2_9STRA) HSP 1 Score: 159 bits (403), Expect = 8.260e-44 Identity = 92/221 (41.63%), Postives = 122/221 (55.20%), Query Frame = 1
Query: 13 SGDYMLSPAAFAARGNRWWESKLMRRVVVPALCVWPLELRLLQCLRRHADTGKRVPHLLNALKYIMAMVVSLFGVFQADNSSDTTDGSMGWQ--KGIWLALYVASSLYSFFWDVRFDWGQDQVLFKGRLAKRRMFSKRWVYHAAIWLDLALRFNWLYSFIPPGLTAFGLLPATLPVYATTFVAIEMLRRTMWGFFRLEHEHLRNTEGYRRSDDVVPLHFTT 669
SGD+++S + + W ++ R V++P +C+ PL R QCLRR+ DT R PHL NA KY + V+LFG F T G + WL ++++SSLYSF WDV DWG + +K L MF KR Y I LDL LRF W+ + +PP A +P L + +E+ RRT+WGF RLE+EH N GYRR VVPLHF T
Sbjct: 93 SGDFLVSEDLDISSKHSWSKTFWYRNVLIPVICLLPLIFRFNQCLRRYIDTNDRWPHLANAFKYAFSQTVTLFGAFHPLYLEHTRKVEKGLNVFQLTWLFIFISSSLYSFTWDVYMDWGLGRPKYK-YLGPSLMFPKRGYYFMVIALDLVLRFMWVLTLLPPQSGAKFEIPQYLSALT---MMLELFRRTIWGFLRLENEHRSNAAGYRRVS-VVPLHFNT 308 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6655.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6655.3.2 >prot_P-wetherbeei_contig6655.3.2 ID=prot_P-wetherbeei_contig6655.3.2|Name=mRNA_P-wetherbeei_contig6655.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=217bp MLSPAAFAARGNRWWESKLMRRVVVPALCVWPLELRLLQCLRRHADTGKRback to top mRNA from alignment at P-wetherbeei_contig6655:2090..3352- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6655.3.2 ID=mRNA_P-wetherbeei_contig6655.3.2|Name=mRNA_P-wetherbeei_contig6655.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1263bp|location=Sequence derived from alignment at P-wetherbeei_contig6655:2090..3352- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6655:2090..3352- >mRNA_P-wetherbeei_contig6655.3.2 ID=mRNA_P-wetherbeei_contig6655.3.2|Name=mRNA_P-wetherbeei_contig6655.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=651bp|location=Sequence derived from alignment at P-wetherbeei_contig6655:2090..3352- (Phaeothamnion wetherbeei SAG_119_79)back to top |