mRNA_P-wetherbeei_contig6642.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6642.1.1 vs. uniprot
Match: A0A067BW87_SAPPC (Nuclear cap-binding protein subunit 2 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BW87_SAPPC) HSP 1 Score: 174 bits (442), Expect = 3.520e-50 Identity = 84/132 (63.64%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 40 PPARIYWDRKSYTSLEEHVGALRGSKTVYVGNLSFYTTEAQIYELFSKVGDVARVIMGLDRHKSTPCGFCFVEYFSGGDATASINFVHGTTLDERVIKVELDPGFRQGRQYGRGNAGGQPREQIADLFDYEP 435
P + YWDR++YTSLEE A++ S T+YVGNLSF+T+E QIYELFS VG V VIMGLDR K TPCGFCFVEYF+ A A NFV GT LD+RVI+ ELD GFR+GRQYGRG GGQ R+ DY+P
Sbjct: 13 PKKKEYWDRQTYTSLEEQQEAMKQSSTLYVGNLSFFTSETQIYELFSVVGPVRAVIMGLDRLKKTPCGFCFVEYFNKEHAQACSNFVSGTKLDQRVIRCELDGGFREGRQYGRGTTGGQVRDDRRSKDDYDP 144
BLAST of mRNA_P-wetherbeei_contig6642.1.1 vs. uniprot
Match: A0A1W0A133_9STRA (Nuclear cap-binding protein subunit 2 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A133_9STRA) HSP 1 Score: 171 bits (432), Expect = 8.020e-49 Identity = 81/132 (61.36%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 40 PPARIYWDRKSYTSLEEHVGALRGSKTVYVGNLSFYTTEAQIYELFSKVGDVARVIMGLDRHKSTPCGFCFVEYFSGGDATASINFVHGTTLDERVIKVELDPGFRQGRQYGRGNAGGQPREQIADLFDYEP 435
P + YWDR++Y SLEE A++ S T+YVGNLSF+T+E QIYELFS VG V VIMGLDR K TPCGFCFVEYF+ A A NF+ T LD+RVI+ ELD GFR+GRQYGRG GGQ R+ DY+P
Sbjct: 13 PKKKEYWDRQTYASLEEQQEAMKQSSTLYVGNLSFFTSETQIYELFSVVGPVRAVIMGLDRIKKTPCGFCFVEYFNKDHAQACANFISSTKLDQRVIRCELDGGFREGRQYGRGTTGGQVRDDRRSKDDYDP 144
BLAST of mRNA_P-wetherbeei_contig6642.1.1 vs. uniprot
Match: A0A4D9D5G1_9STRA (Nuclear cap-binding protein subunit 2 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5G1_9STRA) HSP 1 Score: 168 bits (426), Expect = 1.310e-48 Identity = 73/131 (55.73%), Postives = 100/131 (76.34%), Query Frame = 1
Query: 16 MADLFDYEPPARIYWDRKSYTSLEEHVGALRGSKTVYVGNLSFYTTEAQIYELFSKVGDVARVIMGLDRHKSTPCGFCFVEYFSGGDATASINFVHGTTLDERVIKVELDPGFRQGRQYGRGNAGGQPREQ 408
MA+LFD +P +YWDRK +T ++ + +LRG+K VY+GNLSF TTE QIY+ FSK+G + RVIMGL+R PCGFCF+EYF+ A ++ F+HGTTLD+R+I+VELD G+ R+YGRG +GGQ R++
Sbjct: 1 MAELFDTDPQPLVYWDRKQFTHFQDQIKSLRGTKVVYIGNLSFQTTEPQIYQAFSKIGIIKRVIMGLNRFTKEPCGFCFIEYFNHQCALDAVAFLHGTTLDDRIIRVELDWGYHPSRRYGRGESGGQVRDE 131
BLAST of mRNA_P-wetherbeei_contig6642.1.1 vs. uniprot
Match: A0A8K1CR96_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CR96_PYTOL) HSP 1 Score: 169 bits (428), Expect = 3.810e-48 Identity = 79/129 (61.24%), Postives = 98/129 (75.97%), Query Frame = 1
Query: 49 RIYWDRKSYTSLEEHVGALRGSKTVYVGNLSFYTTEAQIYELFSKVGDVARVIMGLDRHKSTPCGFCFVEYFSGGDATASINFVHGTTLDERVIKVELDPGFRQGRQYGRGNAGGQPREQIADLFDYEP 435
R YWDRK+YTS EE A+ S T+Y+GNLSF+T+E QIYELFS+VG+V RVIMGLDR K TPCGFCFVEY + +A A NFV+ T LD RVI+ E+D GF++GRQ+GRG +GGQ R+ DY+P
Sbjct: 22 RKYWDRKTYTSYEEQQRAIASSATLYIGNLSFFTSEVQIYELFSRVGNVKRVIMGLDRFKKTPCGFCFVEYNTHEEAVACANFVNETKLDNRVIRCEMDGGFKEGRQFGRGASGGQVRDDRRSRDDYDP 150
BLAST of mRNA_P-wetherbeei_contig6642.1.1 vs. uniprot
Match: F0WMQ1_9STRA (Nuclear cap-binding protein subunit 2 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMQ1_9STRA) HSP 1 Score: 169 bits (429), Expect = 4.830e-48 Identity = 84/149 (56.38%), Postives = 105/149 (70.47%), Query Frame = 1
Query: 16 MADLFD--------YEPP-ARIYWDRKSYTSLEEHVGALRGSKTVYVGNLSFYTTEAQIYELFSKVGDVARVIMGLDRHKSTPCGFCFVEYFSGGDATASINFVHGTTLDERVIKVELDPGFRQGRQYGRGNAGGQPREQIADLFDYEP 435
MADL+D + P R YWDRK+Y SLEE A++ S T+Y+GNLSFYT+E Q+ ELFS+VG + RVIMGLDR K TPCGFCFVEY+S +A A NF+ GT LD RVI+ E+D GF QGRQ+GRG +GGQ R+ +Y+P
Sbjct: 1 MADLYDEIAEEEEQFLPKNQRKYWDRKTYKSLEEQQSAIKQSSTLYIGNLSFYTSENQLCELFSRVGTIKRVIMGLDRFKKTPCGFCFVEYYSHAEALACSNFLSGTKLDNRVIRCEMDGGFTQGRQFGRGFSGGQVRDDRRSKDEYDP 149
BLAST of mRNA_P-wetherbeei_contig6642.1.1 vs. uniprot
Match: D8LI70_ECTSI (Nuclear cap-binding protein subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI70_ECTSI) HSP 1 Score: 167 bits (423), Expect = 7.510e-48 Identity = 82/143 (57.34%), Postives = 103/143 (72.03%), Query Frame = 1
Query: 16 MADLFDYEPPARIYWDRKSYTSLEEHVGALRGSKTVYVGNLSFYTTEAQIYELFSKVGDVARVIMGLDRHKSTPCGFCFVEYFSGGDATASINFVHGTTLDERVIKVELDPGFRQGRQYGRGNAGGQPREQIADLFDYEPPAR 444
M ++ D+ R YWDRK+++SLE + AL+ S T+YVGNLSFYT E+QIY LF +VG V RVIMGLDR K +PCGFCFVEY + D +I + GT LDER+IKV +DPGF+QGRQYGRG +GGQ R++ D PAR
Sbjct: 1 MTEMLDFGWSERPYWDRKNWSSLEAYKEALKKSSTLYVGNLSFYTQESQIYALFDQVGAVRRVIMGLDRVKKSPCGFCFVEYTNHSDTLMAITCLDGTALDERIIKVGIDPGFKQGRQYGRGMSGGQVRDEARATND---PAR 140
BLAST of mRNA_P-wetherbeei_contig6642.1.1 vs. uniprot
Match: A0A024GN20_9STRA (Nuclear cap-binding protein subunit 2 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GN20_9STRA) HSP 1 Score: 169 bits (427), Expect = 8.830e-48 Identity = 83/149 (55.70%), Postives = 103/149 (69.13%), Query Frame = 1
Query: 16 MADLFD---------YEPPARIYWDRKSYTSLEEHVGALRGSKTVYVGNLSFYTTEAQIYELFSKVGDVARVIMGLDRHKSTPCGFCFVEYFSGGDATASINFVHGTTLDERVIKVELDPGFRQGRQYGRGNAGGQPREQIADLFDYEP 435
MADL+D R YWDRK+Y SLEE A++ S T+Y+GNLSFYT+E Q+ ELFS+VG + RVIMGLDR K TPCGFCFVEY+S +A A NF+ GT LD RVI+ E+D GF QGRQ+GRG +GGQ R+ +Y+P
Sbjct: 1 MADLYDEIAEEEECLLPKYQRKYWDRKTYKSLEEQQSAIKQSSTLYIGNLSFYTSENQLCELFSRVGTIKRVIMGLDRFKKTPCGFCFVEYYSHAEALACSNFLTGTKLDNRVIRCEMDGGFTQGRQFGRGFSGGQVRDDRRSKDEYDP 149
BLAST of mRNA_P-wetherbeei_contig6642.1.1 vs. uniprot
Match: A0A4P9XRE2_9FUNG (Nuclear cap-binding protein subunit 2 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XRE2_9FUNG) HSP 1 Score: 166 bits (420), Expect = 1.710e-47 Identity = 80/149 (53.69%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 16 MADLFDYEPPARIYWDRKSYTSLEEHVGALRGSKTVYVGNLSFYTTEAQIYELFSKVGDVARVIMGLDRHKSTPCGFCFVEYFSGGDATASINFVHGTTLDERVIKVELDPGFRQGRQYGRGNAGGQPREQIADLFDYEPPARIDWDHM 462
MA L + Y D + S +E + L S T+YVGNLSFYTTE QIYE+FSK G++ R+IMGLDR K TPCGFCFVEY++ DA + +V+GT +DERVI+ +LDPGFR+GRQYGRG +GGQ R++ FD P R W H+
Sbjct: 1 MATLVQHLAAPSTYKDHQYKGSQQEWIDLLNQSCTLYVGNLSFYTTEEQIYEIFSKCGEIKRIIMGLDRVKKTPCGFCFVEYYTHEDAVDCMKYVNGTRVDERVIRTDLDPGFREGRQYGRGKSGGQVRDEYRQEFD---PGRGGWGHL 146
BLAST of mRNA_P-wetherbeei_contig6642.1.1 vs. uniprot
Match: A0A7S2XYK9_9STRA (Nuclear cap-binding protein subunit 2 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYK9_9STRA) HSP 1 Score: 163 bits (413), Expect = 2.100e-47 Identity = 72/114 (63.16%), Postives = 91/114 (79.82%), Query Frame = 1
Query: 16 MADLFDYEPPARIYWDRKSYTSLEEHVGALRGSKTVYVGNLSFYTTEAQIYELFSKVGDVARVIMGLDRHKSTPCGFCFVEYFSGGDATASINFVHGTTLDERVIKVELDPGFR 357
MA+LF EPP ++YWDR+S+++ ++ + + S TVYVGNLSFYTTE Q+ ELFSK+G V RVIMGLDR K TPCGFCFVEY+ A +INF+HGT+LD+RVIKV+LD GFR
Sbjct: 4 MAELFHNEPPQKVYWDRRSFSTFQDQIDCMTHSNTVYVGNLSFYTTETQVKELFSKIGSVKRVIMGLDRFKKTPCGFCFVEYYRHDHALDAINFIHGTSLDDRVIKVDLDYGFR 117
BLAST of mRNA_P-wetherbeei_contig6642.1.1 vs. uniprot
Match: A0A6G0WTP1_9STRA (Nuclear cap-binding protein subunit 2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTP1_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.460e-46 Identity = 78/132 (59.09%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 40 PPARIYWDRKSYTSLEEHVGALRGSKTVYVGNLSFYTTEAQIYELFSKVGDVARVIMGLDRHKSTPCGFCFVEYFSGGDATASINFVHGTTLDERVIKVELDPGFRQGRQYGRGNAGGQPREQIADLFDYEP 435
P + YWDR++Y SLEE A+R S T+YVGNLSF+T+E QIYELFS VG V VIMGL++ TPCGFCFVEYF+ A A NF+ GT LD+RVI+ +LD GF +GRQYGRG +GGQ R+ DY+P
Sbjct: 13 PKKKEYWDRRTYASLEEQQEAIRNSSTLYVGNLSFFTSETQIYELFSVVGPVKAVIMGLNQLTKTPCGFCFVEYFTKEHAQACSNFISGTKLDQRVIRCDLDGGFIEGRQYGRGTSGGQVRDDRRSKEDYDP 144 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6642.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6642.1.1 >prot_P-wetherbeei_contig6642.1.1 ID=prot_P-wetherbeei_contig6642.1.1|Name=mRNA_P-wetherbeei_contig6642.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=213bp MADLFDYEPPARIYWDRKSYTSLEEHVGALRGSKTVYVGNLSFYTTEAQIback to top mRNA from alignment at P-wetherbeei_contig6642:100..1506+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6642.1.1 ID=mRNA_P-wetherbeei_contig6642.1.1|Name=mRNA_P-wetherbeei_contig6642.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1407bp|location=Sequence derived from alignment at P-wetherbeei_contig6642:100..1506+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6642:100..1506+ >mRNA_P-wetherbeei_contig6642.1.1 ID=mRNA_P-wetherbeei_contig6642.1.1|Name=mRNA_P-wetherbeei_contig6642.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig6642:100..1506+ (Phaeothamnion wetherbeei SAG_119_79)back to top |