mRNA_P-wetherbeei_contig6556.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6556.2.1 vs. uniprot
Match: D7FVD1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVD1_ECTSI) HSP 1 Score: 234 bits (597), Expect = 6.520e-67 Identity = 131/261 (50.19%), Postives = 177/261 (67.82%), Query Frame = 1
Query: 4 RQGMTSYEV-------------KRWLAAVAARSRPLSAAFGADWVFGEASTLMRARTGAVRQFEVGMISVVDLKYRVARDLIRHRPCLLSEHKQTIHERAFAMGEDDPIKPDYGRFRRKRRRAAATDAIPLKHGHLENLTHWRANVTAAAAVKLQNVFRAARARRLAAAAARRQAFGAAYALARKDGAARARQEVARHEAESGVARLKWDAAVRVRQARMRAAGEFRDRVAVVAAMTAEAVAAAEDAVRRRFEELAAERGF 747
R+GMT+YEV K W+A + ARS LS FG+ W FG+ ST+MR + V +FE+ MIS+VDLK++VAR LI+HRPCL E+ Q +H+RA AMG+DDP+KPDY RF ++ + ++A+ L HGHLENL+HWR V A K+QN+FR +AR+ A A++QAF A A+A +D R E+ + EA SGV RLKWDA VR++QA++RAAGE DR VV A+ E+V AA+D V RF+E+A +RGF
Sbjct: 377 RKGMTNYEVHDQTWTCTLALQVKTWMAGIIARSPKLSDIFGSSWSFGQMSTVMRCKMSMVHEFELSMISMVDLKHKVARKLIKHRPCLQKENVQVMHDRALAMGDDDPLKPDYSRFLHSDKKKSFSNAVSLSHGHLENLSHWRDTVRIKAVTKIQNLFRGKQARQAAERMAKKQAFLCARAMAVEDTRQRIAAEIWKREAASGVGRLKWDAKVRMKQAKLRAAGENVDRQQVVEAIIEESVQAAQDGVMERFDEIARDRGF 637
BLAST of mRNA_P-wetherbeei_contig6556.2.1 vs. uniprot
Match: A0A835YMZ6_9STRA (Clu domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMZ6_9STRA) HSP 1 Score: 197 bits (501), Expect = 4.990e-54 Identity = 122/250 (48.80%), Postives = 149/250 (59.60%), Query Frame = 1
Query: 10 GMTSYEVKRWLAAVAARSRPLSAAFGADWVFGEASTLMRARTGAVRQFEVGMISVVDLKYRVARDLIRHRPCLLSEHKQTIHERAFAMGEDDPIKPDYGRFRRKRRRAAATDAIPLKHGHLENLTHWRANVTAAAAVKLQNVFRAARARRLAAAAARRQAFGAAYALARKDGAARARQEVARHEAES-GVARLKWDAAVRVRQARMRAAGEFRD---RVAVVAAMTAEAVAAAEDAVRRRFEELAAERGF 747
G+T +E KRWLAA+ R R LS AFGA W EAS LMRART RQ E+G+I++ DLKYR+ARD RHRP L E + +HERA A G+ DP+KPDY RF RRA ++ A+PL HGHL +L HWRA A KLQN++R RA + R EAE+ GVAR++WDA VRVRQA+MRA+G D R + M E AAAE VRRRF+E+A ERG
Sbjct: 484 GLTQFEAKRWLAALVRRDRRLSEAFGAPWGAAEASALMRARTAPARQLELGLITLADLKYRLARDGARHRPQLDPERRLAVHERALARGDGDPLKPDYSRFLAAARRACSSAAVPLAHGHLGSLPHWRARAAQRGATKLQNLWRGRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXMELDFRRREAEAAGVARMRWDAKVRVRQAKMRASGSAGDGVTRADALREMLEETAAAAEADVRRRFDEIARERGI 733
BLAST of mRNA_P-wetherbeei_contig6556.2.1 vs. uniprot
Match: A0A6H5K633_9PHAE (Clu domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K633_9PHAE) HSP 1 Score: 189 bits (479), Expect = 4.370e-51 Identity = 97/191 (50.79%), Postives = 132/191 (69.11%), Query Frame = 1
Query: 25 EVKRWLAAVAARSRPLSAAFGADWVFGEASTLMRARTGAVRQFEVGMISVVDLKYRVARDLIRHRPCLLSEHKQTIHERAFAMGEDDPIKPDYGRFRRKRRRAAATDAIPLKHGHLENLTHWRANVTAAAAVKLQNVFRAARARRLAAAAARRQAFGAAYALARKDGAARARQEVARHEAESGVARLKWDA 597
+VK W+A + ARS LS FG+ W FG+ ST+MR V +FE+ MIS++DLK++VAR LI+HRPCL E+ Q +H+RA AMG+DDP+KPDY RF ++ + ++A+ L+HGHLENL+HWR V A K+QN+FR AR+ A A++QAF A A+A +D R E+ + EA SGV RLKWDA
Sbjct: 181 KVKAWMAGIIARSPKLSDIFGSSWSFGQMSTVMRCSMSMVHEFELSMISMIDLKHKVARKLIKHRPCLQKENVQVVHDRALAMGDDDPLKPDYSRFLHSDQKRSFSNAVSLRHGHLENLSHWRDTVRIKAVTKIQNLFRGKLARQAAETMAKKQAFLCARAMAVEDTRQRIAAEIWKREAASGVGRLKWDA 371
BLAST of mRNA_P-wetherbeei_contig6556.2.1 vs. uniprot
Match: A0A2R5GJD7_9STRA (F-box/LRR-repeat protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJD7_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.240e-40 Identity = 92/231 (39.83%), Postives = 143/231 (61.90%), Query Frame = 1
Query: 61 SRPLSAAFGADWVFGEASTLMRARTGAVRQFEVGMISVVDLKYRVARDLIRHRPCLLSEHKQTIHERAFAMGEDDPIKPDYGRFRRKRRRAAATDAIPLKHGHLENLTHWRANVTAAAAVKLQNVFRAARARRLAAAAARRQAFGAAYALARKDGAARARQEVARHEAESG--VARLKWDAAVRVRQARMRAAGEFRDRVAVVAAMTAEAVAAAEDAVRRRFEELAAERGF 747
S LS F W + S R R ++++E+GM+S+ DL R+AR + +RP L E KQT+HERA AMG +DP+KPDY +F +R+ ++ +PL+HG L N+ ++++ VT AA+ +Q +R+ RR A +R+AF AA+ +A ++ A+ +E A+ EA++ V R+KWDA VR+RQ ++RA G+ R VVA +T E V A+ +V FE++ ERG
Sbjct: 618 SEDLSKVFNVPWAYANLSEWQRTRMSYIKKYELGMLSLRDLNKRIARLWVTYRPLLALEQKQTMHERALAMGRNDPLKPDYAKFMTRRKHKLQSNVVPLEHGGLGNILYYQSRVTYNAAMMVQAAWRSKLGRRRAEREVKRRAFFAAWRVALEESRAKVEREFAKREAQAANTVGRMKWDATVRMRQGKLRALGQAFSREEVVALLTEEEVKVAQTSVDEEFEKMKLERGI 848
BLAST of mRNA_P-wetherbeei_contig6556.2.1 vs. uniprot
Match: A0A662XGU1_9STRA (Clu domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XGU1_9STRA) HSP 1 Score: 143 bits (361), Expect = 2.750e-35 Identity = 94/249 (37.75%), Postives = 140/249 (56.22%), Query Frame = 1
Query: 7 QGMTSYEVKRWLAAVAARSRPLSAAFGADWVFGEASTLMRARTGAVRQFEVGMISVVDLKYRVARDLIRHRPCLLSEHKQTIHERAFAMGEDDPIKPDYGRFRRKRRRAAATDAIPLKHGHLENLTHWRANVTAAAAVKLQNVFRAARARRLAAAAARRQAFGAAYALARKDGAARARQEVARHEAESG--VARLKWDAAVRVRQARMRAAGEFRDRVAVVAAMTAEAVAAAEDAVRRRFEELAAERGF 747
QGMTS E + + RS+ L G W + S + A+ Q+ +G+I++ DLKY VAR +++ R L K IHERA AMGE+DP+K DY ++ KRR ++ +PL HG NL H+R V +AVKLQ +RA + RR+A AA +QAF A LA ++ + +E +A+ V ++K++A +R++Q ++R G R V+A MT EAV A+ V RF E+ E G+
Sbjct: 786 QGMTSREFVAYCMDLVERSKYLCELLGHPWKYELLSRFVIQHMNAIHQYRLGLININDLKYTVARQMVQPREELTRWKKNEIHERALAMGENDPLKTDYSKYLPKRRTKLLSNVVPLDHGGYRNLLHYRMEVILKSAVKLQTSWRAKKGRRVARLAAEKQAFYHARGLALEEARQKIEKEWGERDAKPAHSVDKMKFEAKIRMKQVKLRTKGNAFTREQVLALMTEEAVQVAQKEVENRFREMEEELGY 1034
BLAST of mRNA_P-wetherbeei_contig6556.2.1 vs. uniprot
Match: A0A225WVV9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVV9_9STRA) HSP 1 Score: 140 bits (354), Expect = 2.160e-34 Identity = 94/251 (37.45%), Postives = 137/251 (54.58%), Query Frame = 1
Query: 1 DRQGMTSYEVKRWLAAVAARSRPLSAAFGADWVFGEASTLMRARTGAVRQFEVGMISVVDLKYRVARDLIRHRPCLLSEHKQTIHERAFAMGEDDPIKPDYGRFRRKRRRAAATDAIPLKHGHLENLTHWRANVTAAAAVKLQNVFRAARARRLAAAAARRQAFGAAYALARKDGAARARQEVARHEAESG--VARLKWDAAVRVRQARMRAAGEFRDRVAVVAAMTAEAVAAAEDAVRRRFEELAAERGF 747
+RQGMT +E + S+ L G W + + S + A+ Q+ +G+I+V DLKY +AR LI+ R L K IHERA AMGE+DP+K DY ++ KRR + +PL HG NL H+R V +AVKLQ +RA + R++A AA +QAF A LA +D E +A+ V ++K++ +R++Q ++R G R V+A MT EAV A + V RF E+ E G+
Sbjct: 695 ERQGMTLHEFNNYCMETIEGSKYLCELLGHPWKYQQLSRFVVQHMNAIHQYRLGLINVNDLKYALARQLIQPREELSHWKKAIIHERALAMGENDPLKTDYSKYLPKRRAKLLSKVVPLDHGGYRNLLHYRMEVILRSAVKLQTSWRAKKGRQIARLAAEKQAFYHARGLALEDARQAVEMEWRDRDAKPAHSVDKMKFEGKIRMKQVKLRTKGNAFSREQVLALMTEEAVQATQKEVENRFREMEEELGY 945
BLAST of mRNA_P-wetherbeei_contig6556.2.1 vs. uniprot
Match: G4YXI1_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YXI1_PHYSP) HSP 1 Score: 135 bits (340), Expect = 1.590e-32 Identity = 86/251 (34.26%), Postives = 141/251 (56.18%), Query Frame = 1
Query: 1 DRQGMTSYEVKRWLAAVAARSRPLSAAFGADWVFGEASTLMRARTGAVRQFEVGMISVVDLKYRVARDLIRHRPCLLSEHKQTIHERAFAMGEDDPIKPDYGRFRRKRRRAAATDAIPLKHGHLENLTHWRANVTAAAAVKLQNVFRAARARRLAAAAARRQAFGAAYALARKDGAARARQEVARHEAESG--VARLKWDAAVRVRQARMRAAGEFRDRVAVVAAMTAEAVAAAEDAVRRRFEELAAERGF 747
++ GMT +E ++ S+ L G W + + S + A+ Q+ +G+I++ DLKY +AR + + R L K IHERA AMGE+DP+K DY ++ +R+ ++ +PL HG NL H+R V +AV+LQ +RA + R++A AA +QAF A LA ++ +E + +A+ V ++K++A +R++Q ++R G R V++ MT EAV AA+ V RF E+ E G+
Sbjct: 691 EKNGMTLHEFNKYCVETIEGSKYLCELLGHPWKYQQLSRFVVQHMSAIHQYRLGLININDLKYALARQMTQPREELSQWKKAIIHERALAMGENDPLKTDYSKYLPRRQAKLLSNVVPLDHGGYRNLLHYRMEVILRSAVRLQTTWRARKGRQIARLAAEKQAFYHARGLALEEARQTVEREWSDRDAKPAHSVDKMKFEAKIRMKQVKLRTKGNAFSREQVLSLMTEEAVQAAQKEVENRFREMEEELGY 941
BLAST of mRNA_P-wetherbeei_contig6556.2.1 vs. uniprot
Match: D0N2Q5_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N2Q5_PHYIT) HSP 1 Score: 135 bits (339), Expect = 2.140e-32 Identity = 91/248 (36.69%), Postives = 137/248 (55.24%), Query Frame = 1
Query: 10 GMTSYEVKRWLAAVAARSRPLSAAFGADWVFGEASTLMRARTGAVRQFEVGMISVVDLKYRVARDLIRHRPCLLSEHKQTIHERAFAMGEDDPIKPDYGRFRRKRRRAAATDAIPLKHGHLENLTHWRANVTAAAAVKLQNVFRAARARRLAAAAARRQAFGAAYALARKDGAARARQEVARHEAESG--VARLKWDAAVRVRQARMRAAGEFRDRVAVVAAMTAEAVAAAEDAVRRRFEELAAERGF 747
GMT YE ++ S+ L GA W + + S + A++Q+ +G+I+V DLKY +AR + + R L K IHERA AMGE+DP+K +Y ++ KRR ++ +PL HG NL H R V + +AVKLQ +RA + R++A AA +QAF A LA ++ + QE + + V ++K +A +R++Q ++R G R V+A MT EAV A V RF E+ E G+
Sbjct: 640 GMTLYEFNKYCLETIEGSKYLCELLGAPWKYLDLSRYVIQHMNAIQQYRLGLINVNDLKYALARQMTQPREQLSRWKKAIIHERALAMGENDPLKTEYSKYLPKRRSKLLSNVVPLDHGGYRNLLHHRMEVISRSAVKLQAAWRARKGRQVARLAAEKQAFYHARGLALEESRGQIEQEWRDRDVKPAHSVDKMKLEAKIRMKQVKLRTKGNNFSREQVLALMTEEAVQLAHKEVENRFREMEEELGY 887
BLAST of mRNA_P-wetherbeei_contig6556.2.1 vs. uniprot
Match: A0A329RIW9_9STRA (Clu domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RIW9_9STRA) HSP 1 Score: 134 bits (336), Expect = 5.950e-32 Identity = 90/248 (36.29%), Postives = 136/248 (54.84%), Query Frame = 1
Query: 10 GMTSYEVKRWLAAVAARSRPLSAAFGADWVFGEASTLMRARTGAVRQFEVGMISVVDLKYRVARDLIRHRPCLLSEHKQTIHERAFAMGEDDPIKPDYGRFRRKRRRAAATDAIPLKHGHLENLTHWRANVTAAAAVKLQNVFRAARARRLAAAAARRQAFGAAYALARKDGAARARQEVARHEAESG--VARLKWDAAVRVRQARMRAAGEFRDRVAVVAAMTAEAVAAAEDAVRRRFEELAAERGF 747
GMT +E + S+ L G W + + S + ++Q+ +G+I+V DLKY +AR + + R L K IHERA AMGE+DP+K DY ++ KRR ++ +PL HG NL H+R V +AVKLQ +RA + R++A AA +QAF A LA + R +E + +A+ V ++K +A +R++Q ++R G R V+A MT EAV A+ V RF E+ E G+
Sbjct: 779 GMTLHEFNNYCIETIEGSKYLCELLGLPWKYQQLSRFVIQHMSPIQQYRLGLINVNDLKYTLARQMTQPREELSRWKKAIIHERAVAMGENDPLKTDYSKYLPKRRSKLLSNVVPLDHGGYRNLLHYRMEVIVRSAVKLQATWRAKKGRQVARLAAEKQAFYHARGLALDEARQRIEKEWSDRDAKPAHSVDKMKLEAKIRMKQVKLRTKGNTFSREQVLALMTEEAVQIAQKEVENRFREMEEELGY 1026
BLAST of mRNA_P-wetherbeei_contig6556.2.1 vs. uniprot
Match: A0A5D6YCH9_9STRA (Clu domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCH9_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.100e-31 Identity = 88/248 (35.48%), Postives = 132/248 (53.23%), Query Frame = 1
Query: 10 GMTSYEVKRWLAAVAARSRPLSAAFGADWVFGEASTLMRARTGAVRQFEVGMISVVDLKYRVARDLIRHRPCLLSEHKQTIHERAFAMGEDDPIKPDYGRFRRKRRRAAATDAIPLKHGHLENLTHWRANVTAAAAVKLQNVFRAARARRLAAAAARRQAFGAAYALARKDGAARARQEVARHEAESG--VARLKWDAAVRVRQARMRAAGEFRDRVAVVAAMTAEAVAAAEDAVRRRFEELAAERGF 747
GMT E +++ S+ L G W + S + A QF +G+I++ DLK+ VAR +++ R L K +HERA AMGE+DP+K DY ++ KRR ++ +PL HG NL H R V A VKLQ +RA + R++A AA +QAF A +A ++ A E +A V ++K++A +R++Q ++R G R V A +T EAV A+ V RF E+ E G+
Sbjct: 637 GMTCLEFEKYCVETVETSKYLCELLGHPWKYEHLSRFVVQHMSATHQFRLGLINLNDLKFAVARQMVQPRKELSRWKKNVVHERALAMGENDPLKTDYSKYLPKRRAKLLSNVVPLDHGGYRNLLHHRMEVILRATVKLQTTWRARKGRQVARLAAEKQAFYHARGVALEEARAAVESEWRARDARPAHSVEKMKFEAKIRMKQVKLRTKGNAFSREQVAALLTEEAVQLAQREVENRFREMEEELGY 884 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6556.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6556.2.1 >prot_P-wetherbeei_contig6556.2.1 ID=prot_P-wetherbeei_contig6556.2.1|Name=mRNA_P-wetherbeei_contig6556.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=245bp MTSYEVKRWLAAVAARSRPLSAAFGADWVFGEASTLMRARTGAVRQFEVGback to top mRNA from alignment at P-wetherbeei_contig6556:2207..3220- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6556.2.1 ID=mRNA_P-wetherbeei_contig6556.2.1|Name=mRNA_P-wetherbeei_contig6556.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1014bp|location=Sequence derived from alignment at P-wetherbeei_contig6556:2207..3220- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6556:2207..3220- >mRNA_P-wetherbeei_contig6556.2.1 ID=mRNA_P-wetherbeei_contig6556.2.1|Name=mRNA_P-wetherbeei_contig6556.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig6556:2207..3220- (Phaeothamnion wetherbeei SAG_119_79)back to top |