mRNA_P-wetherbeei_contig6440.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6440.3.1 vs. uniprot
Match: A0A836CNQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ4_9STRA) HSP 1 Score: 171 bits (432), Expect = 1.440e-45 Identity = 92/190 (48.42%), Postives = 117/190 (61.58%), Query Frame = 1
Query: 46 APPMYRQAPGAAPGASYICNRCNKPGHYIRDCPTNGDPTFDNARVKRVHGVPKNFLAVVGQ---GNQKPFQGPAIV---NFSAFSCCCLLPAWRSKESKGGAAAGAVDRAALSAAAPEHLKCPVCGLVMEDAVIARCCHQSACDKCMRDALTDANHLRCPMCSRQ-TSPDDLAPNTSIRRAIEAFAAAQT 594
AP YR PG+AP +Y+C RC+KPGHY++DCPTNGDP +DN R KR+ GVP L V + G G +V N AF+ + K+ KGG GA LSAAAPEHLKCP+C +++DAV+ CC SACD C+RDAL AN ++CP+CSR +PD L PN S+R A + F A T
Sbjct: 231 APAQYRAPPGSAPPPAYVCKRCSKPGHYVKDCPTNGDPNYDNTRRKRILGVPSTMLQVAEEQKGGGLVDAMGRRVVLKSNKEAFA--------KLKDLKGGGGGGAQLLDQLSAAAPEHLKCPLCRNIVQDAVLVPCCQGSACDSCVRDALA-ANSMQCPLCSRPGVTPDQLIPNRSLRAAADDFVARMT 411
BLAST of mRNA_P-wetherbeei_contig6440.3.1 vs. uniprot
Match: A0A6H5L225_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L225_9PHAE) HSP 1 Score: 137 bits (344), Expect = 4.090e-35 Identity = 75/178 (42.13%), Postives = 107/178 (60.11%), Query Frame = 1
Query: 61 RQAPGAAPGASYICNRCNKPGHYIRDCPTNGDPTFDNARVKRVHGVPKNFLAVVGQGNQKPFQGPAIVNFSAFSCCCLL--PAWRSKESKGGAAA--GAVDRAALSAAAPEHLKCPVCGLVMEDAVIARCCHQSACDKCMRDALTDANHLRCPMC-SRQTSPDDLAPNTSIRRAIEAF 579
R+AP +Y+C RC KPGH+I+DCPTN D ++DN R+KRV G+P + + + G++ QG +VN S A+R + GG + G +DR LS +AP+HLKCP+C +M DAVI CC +S CD C+R AL + + CP+C SR PD L PN S+R ++ +
Sbjct: 54 RRAPQGPLPPNYVCRRCCKPGHFIQDCPTNNDSSYDNTRLKRVVGIPTSMIKL-SDGDR---QGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDR--LSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQSRGVGPDSLLPNESLRAGVDEY 225
BLAST of mRNA_P-wetherbeei_contig6440.3.1 vs. uniprot
Match: K3X144_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X144_GLOUD) HSP 1 Score: 131 bits (330), Expect = 5.080e-32 Identity = 69/184 (37.50%), Postives = 102/184 (55.43%), Query Frame = 1
Query: 43 GAPPMYRQAPGAA---PGASYICNRCNKPGHYIRDCPTNGDPTFDNARVKRVHGVPKNFLAVVGQGNQKPF-QGPAIVNFSAFSCCCLLPAWRSKESKGGAAAGAVDRAALSAAAPEHLKCPVCGLVMEDAVIARCCHQSACDKCMRDALTDANHLRCPMCSRQT-SPDDLAPNTSIRRAIEAF 579
G P M+ P A P +Y+C RC PGHYI++CPTNGDP +D RVK+ G+PK+F+ V ++ P G +VN + P ++ + G+ A P+HL CP+C +M DAV+ CC +SACD+C+R AL + L CP+C+ SP+ L PN +R +++ F
Sbjct: 229 GPPGMHNNNPNQAMGNPPPNYVCYRCGTPGHYIQNCPTNGDPEYDQHRVKKKTGIPKSFMKAVNDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMAKSGGSATLDQFIANPPDHLACPLCKRLMNDAVLIPCCQESACDECLRSALIEKK-LTCPLCNTTNMSPEKLLPNKVLRTSVDEF 411
BLAST of mRNA_P-wetherbeei_contig6440.3.1 vs. uniprot
Match: D8LMD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD5_ECTSI) HSP 1 Score: 128 bits (321), Expect = 6.730e-32 Identity = 69/158 (43.67%), Postives = 97/158 (61.39%), Query Frame = 1
Query: 91 SYICNRCNKPGHYIRDCPTNGDPTFDNARVKRVHGVPKNFLAVVGQGNQKPFQGPAIVNFSAFSCCCLL--PAWRSKESKGGAAA--GAVDRAALSAAAPEHLKCPVCGLVMEDAVIARCCHQSACDKCMRDALTDANHLRCPMC-SRQTSPDDLAPN 549
+Y+C RC KPGH+I+DCPTN D ++DN R+KRV G+P + + + G++ QG +VN S A+R + GG + G +DR LS +AP+HLKCP+C +M DAVI CC +S CD C+R AL + + CP+C +R PD L PN
Sbjct: 54 NYVCRRCFKPGHFIQDCPTNNDSSYDNTRLKRVVGIPTSMIKL-SDGDR---QGGGLVNASGQLVTIRANDQAFRKLKEFGGGQSVQGLLDR--LSESAPKHLKCPICSKIMSDAVILPCCAKSTCDSCVRRALNASASMSCPLCQTRGVGPDSLLPN 205
BLAST of mRNA_P-wetherbeei_contig6440.3.1 vs. uniprot
Match: A0A484DZX4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZX4_BRELC) HSP 1 Score: 131 bits (330), Expect = 6.970e-32 Identity = 67/168 (39.88%), Postives = 95/168 (56.55%), Query Frame = 1
Query: 82 PGASYICNRCNKPGHYIRDCPTNGDPTFDNARVKRVHGVPKNFLAVVGQGNQKPFQG-PAIVNFSAFSCCCLLPAWRSKESKGGAAAGAVDRAALSAAAPEHLKCPVCGLVMEDAVIARCCHQSACDKCMRDALTDANHLRCPMCS-RQTSPDDLAPNTSIRRAIEAF 579
P +Y+C RC PGHYI++CPTNGDP FD RVK+ G+PK+F+ V ++ P G +VN + P ++ + G+ + PEHL CP+C +M DAV+ CC +SACD+C+R AL D L CP+CS SP+ L PN +R ++ F
Sbjct: 249 PPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGGGKTVVNAPWGGLAVIEPQNKNFSKLMAQSGGSATLDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSALIDRK-LTCPLCSVNNMSPEKLLPNKVLRTSVNEF 415
BLAST of mRNA_P-wetherbeei_contig6440.3.1 vs. uniprot
Match: A0A8K1C5H0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5H0_PYTOL) HSP 1 Score: 131 bits (330), Expect = 7.270e-32 Identity = 73/173 (42.20%), Postives = 105/173 (60.69%), Query Frame = 1
Query: 82 PGASYICNRCNKPGHYIRDCPTNGDPTFDNARVKRVHGVPKNFLAVVGQGNQKPF-QGPAIVNFSAFSCCCLLPAWRSKESK-----GGAAAGAVDRAALSAAAPEHLKCPVCGLVMEDAVIARCCHQSACDKCMRDALTDANHLRCPMCSRQT-SPDDLAPNTSIRRAIEAF 579
P SY+C RC PGH+I++CPTNGDP FD+ RVKR G+PK+F+ V ++ P G +VN + + ++ SK GG+A +D+ L + P+HL CP+C +M DAV+ CC +SACD+C+R AL D N L CP+C+ SP+ L PN +R ++E F
Sbjct: 243 PPPSYVCFRCGTPGHFIQNCPTNGDPEFDHHRVKRRTGIPKSFMKAVSDPSEIPVGAGKTVVN-APWGGLAVIETQNKNFSKLMTKSGGSAT--LDQ--LISNPPDHLACPLCKRLMNDAVLIPCCQESACDECLRSALIDHN-LTCPLCNTPNMSPEKLLPNKVLRASVEEF 409
BLAST of mRNA_P-wetherbeei_contig6440.3.1 vs. uniprot
Match: A0A2P4Y5F3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4Y5F3_9STRA) HSP 1 Score: 130 bits (326), Expect = 7.540e-32 Identity = 65/169 (38.46%), Postives = 97/169 (57.40%), Query Frame = 1
Query: 79 APGASYICNRCNKPGHYIRDCPTNGDPTFDNARVKRVHGVPKNFLAVVGQGNQKPF-QGPAIVNFSAFSCCCLLPAWRSKESKGGAAAGAVDRAALSAAAPEHLKCPVCGLVMEDAVIARCCHQSACDKCMRDALTDANHLRCPMCS-RQTSPDDLAPNTSIRRAIEAF 579
+P +Y+C RC PGHYI++CPTNGDP FD RVK+ G+PK+F+ V ++ P G +VN + P ++ + G+ + PEHL CP+C +M DAV+ CC +SACD+C+R AL + L CP+C+ SP+ L PN +R +++ F
Sbjct: 247 SPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSATLDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSALIERK-LTCPLCNVSNMSPEKLLPNKVLRTSVDEF 414
BLAST of mRNA_P-wetherbeei_contig6440.3.1 vs. uniprot
Match: W2Q8C9_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2Q8C9_PHYPN) HSP 1 Score: 130 bits (327), Expect = 1.730e-31 Identity = 69/178 (38.76%), Postives = 100/178 (56.18%), Query Frame = 1
Query: 67 APGAA-----PGASYICNRCNKPGHYIRDCPTNGDPTFDNARVKRVHGVPKNFLAVVGQGNQKPF-QGPAIVNFSAFSCCCLLPAWRSKESKGGAAAGAVDRAALSAAAPEHLKCPVCGLVMEDAVIARCCHQSACDKCMRDALTDANHLRCPMCS-RQTSPDDLAPNTSIRRAIEAF 579
APGA P +Y+C RC PGHYI++CPTNGDP FD RVK+ G+PK+F+ V ++ P G +VN + P ++ + G+ + PEHL CP+C +M DAV+ CC +SACD+C+R AL + L CP+C+ SP+ L PN +R +++ F
Sbjct: 239 APGAPNLLGNPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSATLDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSALIERK-LTCPLCNVSNMSPEKLLPNKVLRTSVDEF 415
BLAST of mRNA_P-wetherbeei_contig6440.3.1 vs. uniprot
Match: A0A2P4X587_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X587_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.360e-31 Identity = 65/169 (38.46%), Postives = 97/169 (57.40%), Query Frame = 1
Query: 79 APGASYICNRCNKPGHYIRDCPTNGDPTFDNARVKRVHGVPKNFLAVVGQGNQKPF-QGPAIVNFSAFSCCCLLPAWRSKESKGGAAAGAVDRAALSAAAPEHLKCPVCGLVMEDAVIARCCHQSACDKCMRDALTDANHLRCPMCS-RQTSPDDLAPNTSIRRAIEAF 579
+P +Y+C RC PGHYI++CPTNGDP FD RVK+ G+PK+F+ V ++ P G +VN + P ++ + G+ + PEHL CP+C +M DAV+ CC +SACD+C+R AL + L CP+C+ SP+ L PN +R +++ F
Sbjct: 241 SPPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSATLDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSALIERK-LTCPLCNVSNMSPEKLLPNKVLRTSVDEF 408
BLAST of mRNA_P-wetherbeei_contig6440.3.1 vs. uniprot
Match: D0NE99_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=D0NE99_PHYIT) HSP 1 Score: 129 bits (325), Expect = 2.900e-31 Identity = 65/168 (38.69%), Postives = 96/168 (57.14%), Query Frame = 1
Query: 82 PGASYICNRCNKPGHYIRDCPTNGDPTFDNARVKRVHGVPKNFLAVVGQGNQKPF-QGPAIVNFSAFSCCCLLPAWRSKESKGGAAAGAVDRAALSAAAPEHLKCPVCGLVMEDAVIARCCHQSACDKCMRDALTDANHLRCPMCS-RQTSPDDLAPNTSIRRAIEAF 579
P +Y+C RC PGHYI++CPTNGDP FD RVK+ G+PK+F+ V ++ P G +VN + P ++ + G+ + PEHL CP+C +M DAV+ CC +SACD+C+R AL + L CP+C+ SP+ L PN +R +++ F
Sbjct: 241 PPPNYVCYRCGTPGHYIQNCPTNGDPEFDQHRVKKKTGIPKSFMKAVSDPSEIPVGAGKTVVNAPWGGLAVIEPQNKNFSKLMARSGGSATLDQFISNPPEHLACPLCRRLMSDAVLIPCCQESACDECLRSALIERK-LTCPLCNVSNMSPEKLLPNKVLRTSVDEF 407 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6440.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6440.3.1 >prot_P-wetherbeei_contig6440.3.1 ID=prot_P-wetherbeei_contig6440.3.1|Name=mRNA_P-wetherbeei_contig6440.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=199bp GGGGGPGGGGGGPPGAPPMYRQAPGAAPGASYICNRCNKPGHYIRDCPTNback to top mRNA from alignment at P-wetherbeei_contig6440:519..1794+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6440.3.1 ID=mRNA_P-wetherbeei_contig6440.3.1|Name=mRNA_P-wetherbeei_contig6440.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1276bp|location=Sequence derived from alignment at P-wetherbeei_contig6440:519..1794+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6440:519..1794+ >mRNA_P-wetherbeei_contig6440.3.1 ID=mRNA_P-wetherbeei_contig6440.3.1|Name=mRNA_P-wetherbeei_contig6440.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=597bp|location=Sequence derived from alignment at P-wetherbeei_contig6440:519..1794+ (Phaeothamnion wetherbeei SAG_119_79)back to top |