prot_P-wetherbeei_contig6396.1.3 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6396.1.3
Unique Nameprot_P-wetherbeei_contig6396.1.3
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length524
Homology
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BLAST of mRNA_P-wetherbeei_contig6396.1.3 vs. uniprot
Match: A0A836CKS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS8_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 6.230e-7
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 0 
Query:  257 LAERTEPVEVGVRMSG-AW-RRRGLVRLRISFVRLEAWIVGASGLNLPREPQD--LSCRVTWRGRPKASRGSPAWQNCFCLS 334
            LA R  PVE+ +R +G  W   R ++R+R++ VRL+ W++GASG   P  P D  L+ RVTWRGR  A     +W   FCL+
Sbjct:  181 LASRPYPVELPLRAAGDRWGAARAVLRVRLTMVRLQLWLLGASGFCAPVPPGDPPLALRVTWRGRELAVPRHASWTQGFCLN 262
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6396.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CKS8_9STRA6.230e-743.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6396contigP-wetherbeei_contig6396:185..3457 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6396.1.3mRNA_P-wetherbeei_contig6396.1.3Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6396 185..3457 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6396.1.3 ID=prot_P-wetherbeei_contig6396.1.3|Name=mRNA_P-wetherbeei_contig6396.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=524bp
DPPGNNVLELEVRERFASRPRAHSIRLSSMGRVGTPSTPLSTGMTSPHMH
ADGARRRTLSETISRSGSGGSLATAAKYHADFTEVTASAGLVAAAAMASS
LRSASVCSPGAMPPGKSGGAKAMAAAGGAASPVAACGSNGGLVGPAQHRL
HRDSGKSAVAAATATSTHPGSRHSSSGNGAAVWGHRGSGSGGSGGGSGDG
EREPPEVKDLLTDDSLFDPGAILTKGMATVTQKVLALVTEDELVGTVRLP
ESRMRQLAERTEPVEVGVRMSGAWRRRGLVRLRISFVRLEAWIVGASGLN
LPREPQDLSCRVTWRGRPKASRGSPAWQNCFCLSSRAATLSLDVRPPAAA
ARRRRVTLTVSRAMHLSTFDPVGLADLLNSTAKSKEVGTAEVHESGFRFT
WDRSGKCFVIYNVKKAKFTLLGSESTLATTLLGFSAADHIAAPSPRELAD
PHAPIEPKRKYMSVQSDELPRPLFEPEWQQVTWGPTLLEVMNGGQLAVEV
WSHQTAAAADAAASAAAAAVPHPL
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