mRNA_P-wetherbeei_contig12709.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12709.1.1
Unique NamemRNA_P-wetherbeei_contig12709.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12709.1.1 vs. uniprot
Match: A0A6I3F3U2_9ACTN (Formamidopyrimidine-DNA glycosylase n=4 Tax=root TaxID=1 RepID=A0A6I3F3U2_9ACTN)

HSP 1 Score: 385 bits (988), Expect = 2.290e-132
Identity = 190/280 (67.86%), Postives = 224/280 (80.00%), Query Frame = 1
Query:    1 MPELPEVETVRRGLVGPLTGRRIEHVEVGRERTVRRTSRQALIDGLTGVTIDRFGRRGKYLLADLDSGDQLMIHLRMSGRVLLREPGEERPAHTHVVLHFDQPKPVELWFVDPRTFGEMVVFHPEHVAVELPELSKLGIDPITDGMSREQLKRIVLARSRQMKALILDQHVIAGIGNIYADEILHRAKISPLRLSNTLTPREITRLHESILGILGEAIEAGGSTLSDTQYVDVMGDGGSFQLDHRVYDRAGQRCLTCGTATILRIVSGGRSTCFCPRCQH 840
            MPELPEVETVRRGL   + GRRIE VEVGRERTVRRTS+QALIDGLTG TI    RRGKYLL  LD+GD+LM+HLRMSGR+L+   GEERP HTHVV+H       ELWF+DPRTFGE+VVF P HVA ++PEL+K+G+DPI DG+SR QL  ++ +RSRQ+KAL+LDQHVIAGIGNIY DE LH A +   R S+ +TPRE+T+LH +IL +LG+AIEAGGSTL+DTQYV V G  G FQL HRVYDRAGQRC++CG A I ++  GGR T FCPRCQ 
Sbjct:    1 MPELPEVETVRRGLQAQVAGRRIERVEVGRERTVRRTSKQALIDGLTGATILSVERRGKYLLCPLDTGDELMMHLRMSGRLLVAAAGEERPPHTHVVMHLSGEPAQELWFIDPRTFGEVVVFDPTHVAQQMPELAKMGVDPIADGLSRAQLAALLRSRSRQVKALLLDQHVIAGIGNIYCDESLHLAGVRHDRPSDRVTPREVTKLHAAILQVLGDAIEAGGSTLADTQYVGVDGVAGWFQLSHRVYDRAGQRCISCGKADIRKVTFGGRGTHFCPRCQQ 280          
BLAST of mRNA_P-wetherbeei_contig12709.1.1 vs. uniprot
Match: A0A3C2B5C4_9ACTN (Formamidopyrimidine-DNA glycosylase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B5C4_9ACTN)

HSP 1 Score: 384 bits (986), Expect = 4.610e-132
Identity = 186/280 (66.43%), Postives = 225/280 (80.36%), Query Frame = 1
Query:    1 MPELPEVETVRRGLVGPLTGRRIEHVEVGRERTVRRTSRQALIDGLTGVTIDRFGRRGKYLLADLDSGDQLMIHLRMSGRVLLREPGEERPAHTHVVLHFDQPKPVELWFVDPRTFGEMVVFHPEHVAVELPELSKLGIDPITDGMSREQLKRIVLARSRQMKALILDQHVIAGIGNIYADEILHRAKISPLRLSNTLTPREITRLHESILGILGEAIEAGGSTLSDTQYVDVMGDGGSFQLDHRVYDRAGQRCLTCGTATILRIVSGGRSTCFCPRCQH 840
            MPELPEVETVRRG+   + GRRI  VEVGRERTVRRTSRQALIDGLTG TI    RRGKYLL  LD+GD+LM+HLRMSGR+L+   G  RPAHTHVV+H       ELWFVDPRTFGE+VVF P +V VELPEL++LG+DPI DG++R QL  ++  R R +K L+LDQHV+AG+GNIYADE LHRA++   RL+++LT RE+ RL ++++ +L EA+EAGGSTL+DTQYVD+ G  G FQ+ HRVYDRAGQRC+TCG A I R++ GGRSTCFCPRCQH
Sbjct:    1 MPELPEVETVRRGVQAQVVGRRITAVEVGRERTVRRTSRQALIDGLTGATILAANRRGKYLLCPLDTGDELMVHLRMSGRLLVAAAGTPRPAHTHVVMHLSGSPRQELWFVDPRTFGEVVVFDPANVDVELPELARLGVDPIADGLTRTQLATLLAGRRRLLKPLLLDQHVVAGVGNIYADESLHRARLRHDRLADSLTSREVGRLRDAVVSVLTEAVEAGGSTLTDTQYVDIEGGQGWFQVHHRVYDRAGQRCITCGKADIQRVMMGGRSTCFCPRCQH 280          
BLAST of mRNA_P-wetherbeei_contig12709.1.1 vs. uniprot
Match: A0A6I3CAG0_9ACTN (Formamidopyrimidine-DNA glycosylase n=2 Tax=root TaxID=1 RepID=A0A6I3CAG0_9ACTN)

HSP 1 Score: 372 bits (956), Expect = 2.390e-127
Identity = 190/279 (68.10%), Postives = 216/279 (77.42%), Query Frame = 1
Query:    1 MPELPEVETVRRGLVGPLTGRRIEHVEVGRERTVRRTSRQALIDGLTGVTIDRFGRRGKYLLADLDSGDQLMIHLRMSGRVLLREPGEERPAHTHVVLHFDQPKPVELWFVDPRTFGEMVVFHPEHVAVELPELSKLGIDPITDGMSREQLKRIVLARSRQMKALILDQHVIAGIGNIYADEILHRAKISPLRLSNTLTPREITRLHESILGILGEAIEAGGSTLSDTQYVDVMGDGGSFQLDHRVYDRAGQRCLTCGTATILRIVSGGRSTCFCPRCQ 837
            MPELPEVETVRRGL     GR IE VEVGRERTVRRTSR A+IDGLTGVT     RRGKYL+  LDSGD +MIHLRMSGRVL+      RP HTHVVLH   P+  EL FVDPRTFGE+VV+ P++ AVE+PEL +LGIDPITDG+SR QL  +V  RSRQ+KAL+LDQ +IAGIGNIYADE LH A++   RLSN+L P EITRLH++I   L  AI AGGSTL DTQYVD+ G GG FQ+ HRVYDR  Q CLTCG A I R+++ GRSTCFCPRCQ
Sbjct:   11 MPELPEVETVRRGLEQRFVGRLIERVEVGRERTVRRTSRLAVIDGLTGVTATAAQRRGKYLICPLDSGDSMMIHLRMSGRVLIDPVSSPRPLHTHVVLHLAGPEAEELRFVDPRTFGEVVVYDPDNAAVEMPELGRLGIDPITDGLSRSQLAALVGGRSRQLKALLLDQSMIAGIGNIYADETLHAARLRHDRLSNSLRPVEITRLHQAIHDTLNAAIAAGGSTLKDTQYVDIGGQGGWFQVSHRVYDREDQPCLTCGRAVIRRVIAAGRSTCFCPRCQ 289          
BLAST of mRNA_P-wetherbeei_contig12709.1.1 vs. uniprot
Match: A0A6J6DF94_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6DF94_9ZZZZ)

HSP 1 Score: 369 bits (948), Expect = 2.780e-126
Identity = 191/280 (68.21%), Postives = 216/280 (77.14%), Query Frame = 1
Query:    1 MPELPEVETVRRGLVGPLTGRRIEHVEVGRERTVRRTSRQALIDGLTGVTIDRFGRRGKYLLADLDSGDQLMIHLRMSGRVLLREPGEERPAHTHVVLHFDQPKPVELWFVDPRTFGEMVVFHPEHVAVELPELSKLGIDPITDGMSREQLKRIVLARSRQMKALILDQHVIAGIGNIYADEILHRAKISPLRLSNTLTPREITRLHESILGILGEAIEAGGSTLSDTQYVDVMGDGGSFQLDHRVYDRAGQRCLTCGTATILRIVSGGRSTCFCPRCQH 840
            MPELPEVETVRRGL   L GR +  VEVGRERTVRRTS QA+IDGLTG TI    RRGKYLL  LD+GD +MIHLRMSGRVLL      RP HTHV          EL FVDPRTFGE+VVF P + AVE+P+L  LG+DPITDGM+R  L RIV  R+R +KAL+LDQHV+AGIGNIY DEILH A++ P R+SNTLT +EITRLH  I  +L EAIEAGGSTL+DTQYVDV G+GG FQL HRVYDRAG+RC+TCG A ++RI  GGRST FCPRCQ 
Sbjct:    1 MPELPEVETVRRGLDVRLVGRTVLQVEVGRERTVRRTSAQAVIDGLTGATIVDTRRRGKYLLLGLDTGDDVMIHLRMSGRVLLHTVDTPRPPHTHVAALLTGEPGEELRFVDPRTFGEVVVFDPTNAAVEVPDLHALGVDPITDGMTRTTLARIVRGRARALKALLLDQHVVAGIGNIYCDEILHAARLRPDRISNTLTGQEITRLHREIHRVLNEAIEAGGSTLADTQYVDVDGNGGQFQLAHRVYDRAGERCITCGRADVVRIPWGGRSTHFCPRCQR 280          
BLAST of mRNA_P-wetherbeei_contig12709.1.1 vs. uniprot
Match: A0A6C7E821_ILUCY (Formamidopyrimidine-DNA glycosylase n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E821_ILUCY)

HSP 1 Score: 364 bits (934), Expect = 3.480e-124
Identity = 186/280 (66.43%), Postives = 215/280 (76.79%), Query Frame = 1
Query:    1 MPELPEVETVRRGLVGPLTGRRIEHVEVGRERTVRRTSRQALIDGLTGVTIDRFGRRGKYLLADLDSGDQLMIHLRMSGRVLLREPGEERPAHTHVVLHFDQPKPVELWFVDPRTFGEMVVFHPEHVAVELPELSKLGIDPITDGMSREQLKRIVLARSRQMKALILDQHVIAGIGNIYADEILHRAKISPLRLSNTLTPREITRLHESILGILGEAIEAGGSTLSDTQYVDVMGDGGSFQLDHRVYDRAGQRCLTCGTATILRIVSGGRSTCFCPRCQH 840
            MPELPEVETVRRGL     GRRIE VEVGRER VRRTSR+AL+DGLT   I+R  RRGKYLL  LDSGD  MIHLRMSG+VL+ + G  RPAHTHVV+H D     ELWFVDPRTFGE+VVF P+ V VELPEL+KLGIDPI +  ++ QL  IV + +R +K L+LDQH IAGIGNIYADEILH A++ P R +NTL  R ITRLH +I+ +L  AI AGGSTL D QYVD+MG+GGS+Q DHRVY R G+RCLTCG   I R VSGGR T +CP CQ+
Sbjct:    1 MPELPEVETVRRGLDRHARGRRIERVEVGRERVVRRTSREALVDGLTNTRIERTDRRGKYLLLPLDSGDVAMIHLRMSGQVLIADGGAARPAHTHVVMHLDNDS--ELWFVDPRTFGEVVVFAPDRVDVELPELAKLGIDPIAEPFAKAQLSAIVRSTARALKPLLLDQHKIAGIGNIYADEILHAARLRPDRPANTLDARAITRLHLAIVDVLSAAIAAGGSTLGDAQYVDLMGEGGSYQDDHRVYARGGERCLTCGRGWIRRTVSGGRGTHYCPVCQY 278          
BLAST of mRNA_P-wetherbeei_contig12709.1.1 vs. uniprot
Match: A0A7K1B5D1_9ACTN (Formamidopyrimidine-DNA glycosylase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K1B5D1_9ACTN)

HSP 1 Score: 368 bits (944), Expect = 1.210e-123
Identity = 190/280 (67.86%), Postives = 216/280 (77.14%), Query Frame = 1
Query:    1 MPELPEVETVRRGLVGPLTGRRIEHVEVGRERTVRRTSRQALIDGLTGVTIDRFGRRGKYLLADLDSGDQLMIHLRMSGRVLLREPGEERPAHTHVVLHFDQPKPVELWFVDPRTFGEMVVFHPEHVAVELPELSKLGIDPITDGMSREQLKRIVLARSRQMKALILDQHVIAGIGNIYADEILHRAKISPLRLSNTLTPREITRLHESILGILGEAIEAGGSTLSDTQYVDVMGDGGSFQLDHRVYDRAGQRCLTCGTATILRIVSGGRSTCFCPRCQH 840
            +PELPEVETVRRGL   L GR +  VEVGRERTVRRTS QA+IDGLTG TI    RRGKYLL  LD+GD +MIHLRMSGRVLL      RP HTHV          EL FVDPRTFGE+VVF P + AVE+P+L  LG+DPITDGM+R  L RIV  R+R +KAL+LDQHV+AGIGNIY DEILH A++ P R+SNTLT +EITRLH  I  +L EAIEAGGSTL+DTQYVDV G+GG FQL HRVYDRAG+RC+TCG A ++RI  GGRST FCPRCQ 
Sbjct:  139 VPELPEVETVRRGLDVRLVGRTVLQVEVGRERTVRRTSAQAVIDGLTGATIVDTRRRGKYLLLGLDTGDDVMIHLRMSGRVLLHTVDTPRPPHTHVAALLTGEPGEELRFVDPRTFGEVVVFDPTNAAVEVPDLHALGVDPITDGMTRTTLARIVRGRARALKALLLDQHVVAGIGNIYCDEILHAARLRPDRISNTLTGQEITRLHREIHRVLNEAIEAGGSTLADTQYVDVDGNGGQFQLAHRVYDRAGERCITCGRADVVRIPWGGRSTHFCPRCQR 418          
BLAST of mRNA_P-wetherbeei_contig12709.1.1 vs. uniprot
Match: A0A6I3WT75_9ACTN (Formamidopyrimidine-DNA glycosylase n=2 Tax=root TaxID=1 RepID=A0A6I3WT75_9ACTN)

HSP 1 Score: 354 bits (909), Expect = 2.360e-120
Identity = 182/279 (65.23%), Postives = 214/279 (76.70%), Query Frame = 1
Query:    1 MPELPEVETVRRGLVGPLTGRRIEHVEVGRERTVRRTSRQALIDGLTGVTIDRFGRRGKYLLADLDSGDQLMIHLRMSGRVLLREPGEERPAHTHVVLHFDQPKPVELWFVDPRTFGEMVVFHPEHVAVELPELSKLGIDPITDGMSREQLKRIVLARSRQMKALILDQHVIAGIGNIYADEILHRAKISPLRLSNTLTPREITRLHESILGILGEAIEAGGSTLSDTQYVDVMGDGGSFQLDHRVYDRAGQRCLTCGTATILRIVSGGRSTCFCPRCQ 837
            MPELPEVETVRRGL     GR IE VEVGRERTVRRTSR A+IDGLTG T     RRGKYL+  LD+GD +MIHLRMSGRVL+      R AHTHVVLH       EL FVDPRTFGE+VVF P++  VE+PEL+++GIDPI DG++R QL  +VL RSRQ+KA++LDQ V+AGIGNIYADEILH +++ P R S++LT  EI+RLH +I   L  AIEAGGSTL DTQYVD+ G GG FQ+ HRVYDR GQ C+TCG + I R++S GRST FCPRCQ
Sbjct:    1 MPELPEVETVRRGLEQRFVGRLIERVEVGRERTVRRTSRLAVIDGLTGATALAAQRRGKYLILPLDTGDSMMIHLRMSGRVLIDPVDAPRLAHTHVVLHLAGQPREELRFVDPRTFGEVVVFDPDNAEVEMPELARMGIDPIADGLTRAQLATLVLGRSRQIKAMLLDQGVVAGIGNIYADEILHASRLRPDRRSDSLTTAEISRLHAAIGDTLRAAIEAGGSTLRDTQYVDIGGQGGWFQVSHRVYDREGQPCITCGRSVIRRVMSAGRSTSFCPRCQ 279          
BLAST of mRNA_P-wetherbeei_contig12709.1.1 vs. uniprot
Match: A0A4R7I3D9_9ACTN (Formamidopyrimidine-DNA glycosylase n=2 Tax=Acidimicrobiales TaxID=84993 RepID=A0A4R7I3D9_9ACTN)

HSP 1 Score: 354 bits (909), Expect = 2.620e-120
Identity = 180/283 (63.60%), Postives = 214/283 (75.62%), Query Frame = 1
Query:    1 MPELPEVETVRRGLVGPLTGRRIEHVEVGRERTVRRTSRQALIDGLTGVTIDRFGRRGKYLLADLDSGDQLMIHLRMSGRVLLREPGEERPAHTHVVLHFDQP---KPVELWFVDPRTFGEMVVFHPEHVAVELPELSKLGIDPITDGMSREQLKRIVLARSRQMKALILDQHVIAGIGNIYADEILHRAKISPLRLSNTLTPREITRLHESILGILGEAIEAGGSTLSDTQYVDVMGDGGSFQLDHRVYDRAGQRCLTCGTATILRIVSGGRSTCFCPRCQH 840
            MPELPEVETVRRGL     GRR+  VEVGRERTVRRTS QA+IDGLTG TI    RRGKYL   LDSGD++MIHLRMSG+VL+ E G  RP HTHVVLHFD     +  ELWFVDPRTFGE+VVF P+HV  ELP++++LG+DPI D +S  +L+RI+ +R R +K L+LDQH+I GIGNIYADEILH A++ P R+SN L+ +   RLH +I  IL EAI+AGGSTLSD QYVD+ G+GGS+Q  H VY RAG+RC TCG   I   VS  RST +CPRCQ 
Sbjct:    1 MPELPEVETVRRGLERHAVGRRVGRVEVGRERTVRRTSAQAVIDGLTGTTILAANRRGKYLFLPLDSGDEVMIHLRMSGQVLVAEAGSPRPPHTHVVLHFDPDAAGERHELWFVDPRTFGEVVVFDPDHVETELPDVARLGVDPIVDDLSLPELRRILRSRRRLLKPLLLDQHLITGIGNIYADEILHEARLRPNRISNELSTQSERRLHAAIHRILNEAIDAGGSTLSDAQYVDLFGEGGSYQDAHHVYGRAGERCRTCGVGWIRLTVSAQRSTHYCPRCQR 283          
BLAST of mRNA_P-wetherbeei_contig12709.1.1 vs. uniprot
Match: A0A6N2DE88_9ACTN (Formamidopyrimidine-DNA glycosylase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DE88_9ACTN)

HSP 1 Score: 353 bits (905), Expect = 1.780e-119
Identity = 177/283 (62.54%), Postives = 212/283 (74.91%), Query Frame = 1
Query:    1 MPELPEVETVRRGLVGPLTGRRIEHVEVGRERTVRRTSRQALIDGLTGVTIDRFGRRGKYLLADLDSGDQLMIHLRMSGRVLLREPGEERPAHTHVVLHF---DQPKPVELWFVDPRTFGEMVVFHPEHVAVELPELSKLGIDPITDGMSREQLKRIVLARSRQMKALILDQHVIAGIGNIYADEILHRAKISPLRLSNTLTPREITRLHESILGILGEAIEAGGSTLSDTQYVDVMGDGGSFQLDHRVYDRAGQRCLTCGTATILRIVSGGRSTCFCPRCQH 840
            +PELPEVETVRRGL   + GRR+EHVEVGRERTVRRTSR+ALI GLT  TI    RRGKYLL  LDSG+ LMIHLRMSGRVL+   G  RP HTHV +         P ELWFVDPRTFGE+VV+ P+ VAVELPEL++LG+DPI +  +R QL+R++  RSRQ+K  +LDQH++AGIGNIYADEILH A++ P R S++L+     RLH ++LG+L  AIEAGGSTL D QYVD+ G GGS+Q  HRVY R G+RCLTCG   + RIV   RST +C RCQ 
Sbjct:   16 VPELPEVETVRRGLASRVVGRRVEHVEVGRERTVRRTSREALIAGLTDTTIVSADRRGKYLLCPLDSGETLMIHLRMSGRVLVVPAGSPRPPHTHVAVRLAGAPSRPPEELWFVDPRTFGEVVVYDPDRVAVELPELARLGVDPIAEEFTRRQLRRLLRTRSRQLKQFLLDQHLVAGIGNIYADEILHAARLRPQRPSDSLSTMAEARLHTAVLGVLNAAIEAGGSTLRDAQYVDLFGSGGSYQEAHRVYGRGGERCLTCGVGWVRRIVVAQRSTHYCARCQR 298          
BLAST of mRNA_P-wetherbeei_contig12709.1.1 vs. uniprot
Match: A0A4P5RFR2_9ACTN (Formamidopyrimidine-DNA glycosylase n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A4P5RFR2_9ACTN)

HSP 1 Score: 347 bits (891), Expect = 1.430e-117
Identity = 174/284 (61.27%), Postives = 216/284 (76.06%), Query Frame = 1
Query:    1 MPELPEVETVRRGLVGPLTGRRIEHVEVGRERTVRRTSRQALIDGLTGVTIDRFGRRGKYLLADLDSGDQLMIHLRMSGRVLLREPGEERPAHTHVVLHFDQPKPVE----LWFVDPRTFGEMVVFHPEHVAVELPELSKLGIDPITDGMSREQLKRIVLARSRQMKALILDQHVIAGIGNIYADEILHRAKISPLRLSNTLTPREITRLHESILGILGEAIEAGGSTLSDTQYVDVMGDGGSFQLDHRVYDRAGQRCLTCGTATILRIVSGGRSTCFCPRCQH 840
            MPELPEVETVRRG+   + GRRI  VEVGRERTVRRTSR+ALIDGL+G T+    RRGKYLL  LDSG+++MIHLRMSGRVL+   G ERP HTHVVLH  QP+  E    +WFVDPRTFGE+VVF P  +AVE+P+L+KLG+DP+ D  + E L+     +   +KA +LDQHV+AGIGNIYADEI+HRAK+   R+ ++L+ R + RLHE+I+ +L +A+EAGGSTL DTQYVD+ G+ G FQ +HRVY RAG+ CLTC  A I R V  GR+TC+C  CQH
Sbjct:    1 MPELPEVETVRRGIESHVVGRRITRVEVGRERTVRRTSREALIDGLSGTTVVAANRRGKYLLCPLDSGEEMMIHLRMSGRVLVAPAGSERPPHTHVVLHL-QPRAGEVANEMWFVDPRTFGEVVVFDPARLAVEMPDLAKLGVDPLVDEFTPEILRERFARKRGNLKATLLDQHVLAGIGNIYADEIMHRAKLRWSRVPSSLSMRTLVRLHEAIVHVLTKAVEAGGSTLDDTQYVDIDGEQGWFQTEHRVYGRAGEVCLTCKKARISRTVVAGRTTCYCAHCQH 283          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12709.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I3F3U2_9ACTN2.290e-13267.86Formamidopyrimidine-DNA glycosylase n=4 Tax=root T... [more]
A0A3C2B5C4_9ACTN4.610e-13266.43Formamidopyrimidine-DNA glycosylase n=1 Tax=Acidim... [more]
A0A6I3CAG0_9ACTN2.390e-12768.10Formamidopyrimidine-DNA glycosylase n=2 Tax=root T... [more]
A0A6J6DF94_9ZZZZ2.780e-12668.21Unannotated protein n=1 Tax=freshwater metagenome ... [more]
A0A6C7E821_ILUCY3.480e-12466.43Formamidopyrimidine-DNA glycosylase n=1 Tax=Ilumat... [more]
A0A7K1B5D1_9ACTN1.210e-12367.86Formamidopyrimidine-DNA glycosylase n=1 Tax=Actino... [more]
A0A6I3WT75_9ACTN2.360e-12065.23Formamidopyrimidine-DNA glycosylase n=2 Tax=root T... [more]
A0A4R7I3D9_9ACTN2.620e-12063.60Formamidopyrimidine-DNA glycosylase n=2 Tax=Acidim... [more]
A0A6N2DE88_9ACTN1.780e-11962.54Formamidopyrimidine-DNA glycosylase n=1 Tax=Ilumat... [more]
A0A4P5RFR2_9ACTN1.430e-11761.27Formamidopyrimidine-DNA glycosylase n=2 Tax=Actino... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12709contigP-wetherbeei_contig12709:644..1486 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1313172.YM304_18680
Preferred namemutM
PFAMsFapy_DNA_glyco,H2TH,zf-FPG_IleRS
Model size843
Max annot lvl84992|Acidimicrobiia
KEGG koko:K10563
KEGG Pathwayko03410,map03410
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.71e-125
EggNOG OGsCOG0266@1|root,COG0266@2|Bacteria,2GJNT@201174|Actinobacteria,4CN5C@84992|Acidimicrobiia
EC3.2.2.23,4.2.99.18
DescriptionInvolved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
Cds size843
COG categoryL
BRITEko00000,ko00001,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185958.002005-CDS-P-wetherbeei_contig12709:643..14861683185958.002005-CDS-P-wetherbeei_contig12709:643..1486Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12709 644..1486 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12709.1.1prot_P-wetherbeei_contig12709.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12709 644..1486 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12709.1.1

>prot_P-wetherbeei_contig12709.1.1 ID=prot_P-wetherbeei_contig12709.1.1|Name=mRNA_P-wetherbeei_contig12709.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=281bp
MPELPEVETVRRGLVGPLTGRRIEHVEVGRERTVRRTSRQALIDGLTGVT
IDRFGRRGKYLLADLDSGDQLMIHLRMSGRVLLREPGEERPAHTHVVLHF
DQPKPVELWFVDPRTFGEMVVFHPEHVAVELPELSKLGIDPITDGMSREQ
LKRIVLARSRQMKALILDQHVIAGIGNIYADEILHRAKISPLRLSNTLTP
REITRLHESILGILGEAIEAGGSTLSDTQYVDVMGDGGSFQLDHRVYDRA
GQRCLTCGTATILRIVSGGRSTCFCPRCQH*
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mRNA from alignment at P-wetherbeei_contig12709:644..1486-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12709.1.1 ID=mRNA_P-wetherbeei_contig12709.1.1|Name=mRNA_P-wetherbeei_contig12709.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig12709:644..1486- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCGAGCTGCCGGAGGTGGAGACCGTCCGTCGCGGACTGGTCGGGCC GCTGACCGGGCGGCGCATCGAGCACGTCGAGGTCGGTCGCGAGCGCACCG TTCGGCGCACCTCGCGCCAGGCCCTGATCGACGGGCTCACCGGCGTCACC ATCGACCGCTTTGGCCGGCGCGGCAAGTACCTCCTCGCCGATCTCGACTC CGGCGACCAGCTGATGATCCACCTGCGGATGAGCGGGCGGGTGCTGCTGC GTGAGCCCGGCGAGGAACGGCCGGCGCACACCCACGTCGTGCTGCACTTC GACCAGCCGAAGCCGGTGGAGCTGTGGTTCGTCGATCCGCGGACGTTCGG CGAGATGGTCGTCTTCCACCCCGAGCACGTCGCCGTCGAGCTCCCCGAGC TGTCGAAGCTCGGCATCGATCCGATCACCGACGGGATGTCGCGAGAGCAG CTGAAGCGCATCGTGCTGGCCAGGTCGCGGCAGATGAAGGCGTTGATCCT CGACCAGCACGTCATCGCCGGGATCGGCAACATCTACGCCGACGAGATCC TGCACCGGGCGAAGATCAGCCCGCTGCGCCTCTCGAACACGCTCACGCCG CGGGAGATCACCAGGCTCCACGAGAGCATCCTGGGCATCCTCGGCGAGGC CATCGAGGCCGGCGGGAGCACGCTCAGCGACACCCAGTACGTCGACGTGA TGGGTGACGGCGGCTCGTTCCAGCTCGATCACCGCGTCTACGACCGCGCC GGCCAGCGCTGCCTGACCTGCGGCACGGCGACCATCCTGCGCATCGTCAG CGGCGGCCGCTCCACCTGCTTCTGCCCCCGCTGCCAACACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12709:644..1486-

>mRNA_P-wetherbeei_contig12709.1.1 ID=mRNA_P-wetherbeei_contig12709.1.1|Name=mRNA_P-wetherbeei_contig12709.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig12709:644..1486- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCGAGCTGCCGGAGGTGGAGACCGTCCGTCGCGGACTGGTCGGGCC
GCTGACCGGGCGGCGCATCGAGCACGTCGAGGTCGGTCGCGAGCGCACCG
TTCGGCGCACCTCGCGCCAGGCCCTGATCGACGGGCTCACCGGCGTCACC
ATCGACCGCTTTGGCCGGCGCGGCAAGTACCTCCTCGCCGATCTCGACTC
CGGCGACCAGCTGATGATCCACCTGCGGATGAGCGGGCGGGTGCTGCTGC
GTGAGCCCGGCGAGGAACGGCCGGCGCACACCCACGTCGTGCTGCACTTC
GACCAGCCGAAGCCGGTGGAGCTGTGGTTCGTCGATCCGCGGACGTTCGG
CGAGATGGTCGTCTTCCACCCCGAGCACGTCGCCGTCGAGCTCCCCGAGC
TGTCGAAGCTCGGCATCGATCCGATCACCGACGGGATGTCGCGAGAGCAG
CTGAAGCGCATCGTGCTGGCCAGGTCGCGGCAGATGAAGGCGTTGATCCT
CGACCAGCACGTCATCGCCGGGATCGGCAACATCTACGCCGACGAGATCC
TGCACCGGGCGAAGATCAGCCCGCTGCGCCTCTCGAACACGCTCACGCCG
CGGGAGATCACCAGGCTCCACGAGAGCATCCTGGGCATCCTCGGCGAGGC
CATCGAGGCCGGCGGGAGCACGCTCAGCGACACCCAGTACGTCGACGTGA
TGGGTGACGGCGGCTCGTTCCAGCTCGATCACCGCGTCTACGACCGCGCC
GGCCAGCGCTGCCTGACCTGCGGCACGGCGACCATCCTGCGCATCGTCAG
CGGCGGCCGCTCCACCTGCTTCTGCCCCCGCTGCCAACACTGA
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