prot_P-wetherbeei_contig630.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig630.1.2
Unique Nameprot_P-wetherbeei_contig630.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length742
Homology
BLAST of mRNA_P-wetherbeei_contig630.1.2 vs. uniprot
Match: D8LTE9_ECTSI (RecQ-mediated genome instability protein 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE9_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 8.580e-28
Identity = 83/181 (45.86%), Postives = 105/181 (58.01%), Query Frame = 0
Query:    5 EQAAT-IEHALAERGIKLRRDWIEACLAELAQEAAGG-------NGQPSGSWEQR-VYAMFLLCDLREASEGCLPPNVAGMVKQRIDGPLMLQVDEYKNVAAAAEQR---DADSAGRVLKLCLSDGRRQAAAMEYRCVSGFVLEKMARGTKLLVSAVEVRRGMLLLTDANTAVLGGTTALL 173
            +Q AT +  ++A  G+ LR DW++ CL     EA GG       NGQ   S  Q  VY  FL CDLREA E CLP  V GMVK+R+ G +++QV+  +++A   EQR   D  SA   LKL L DGR+  AA EYR V G V +    G KLL+    VRRG+LLL+  NT VLGG  + L
Sbjct:    2 QQTATRVRQSMAGLGVHLRLDWVKHCL-----EAGGGMDPGAIGNGQRQQSEAQEGVYRTFLACDLREAGEACLPAGVGGMVKERVKGKMVVQVENARDIAKNLEQREKVDGSSAHHTLKLALGDGRQTVAAFEYRRVQGLVADPPL-GLKLLLVEPWVRRGILLLSSENTTVLGGEVSSL 176          
BLAST of mRNA_P-wetherbeei_contig630.1.2 vs. uniprot
Match: A0A2P6TY87_CHLSO (RecQ-mediated genome instability protein 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TY87_CHLSO)

HSP 1 Score: 99.8 bits (247), Expect = 7.360e-18
Identity = 63/161 (39.13%), Postives = 81/161 (50.31%), Query Frame = 0
Query:   10 IEHALAERGIKLRRDWIEACLAELAQEAAGGNGQPSGSWEQRVYAMFLLCDLREASEGCLPPNVAGMVKQRIDGPLMLQVDEYKNVAAAAEQRDA--DSAGRVLKLCLSDGRRQAAAMEYRCVSGFVLEKMARGTKLLVSAVEVRRGMLLLTDANTAVLGG 168
            +E  L   G ++   W+  CLA L     G    P     + V    L  DL +     LPP V G+    + G L+LQVDE  N+AAA  +R +  D   R LKL L+DG +Q AA+EYR     +   M  G KL+V    VRRG+LLLT    AVLGG
Sbjct:    4 LEEELGRLGARVSPQWLAGCLAFLQGAQPGLGAAPPPVRAKAVLQQLLAADLNQCGAAALPPGVQGLHDTTLPGKLLLQVDEVLNIAAAVRERYSGHDGGHRCLKLLLTDGVQQVAAVEYRPTPA-LHSAMPAGCKLVVQGAAVRRGILLLTPQCCAVLGG 163          
BLAST of mRNA_P-wetherbeei_contig630.1.2 vs. uniprot
Match: A0A151RRF7_CAJCA (RecQ-mediated genome instability protein 1 n=3 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RRF7_CAJCA)

HSP 1 Score: 97.8 bits (242), Expect = 1.980e-17
Identity = 61/169 (36.09%), Postives = 88/169 (52.07%), Query Frame = 0
Query:    4 PEQAATIEHALAERGIKLRRDWIEACLAELAQEAAGGNGQPSGSWEQRVYAMFLLCDLREASEGCLPPNVAGMVKQRIDGPLMLQVDEYKNVAAAAEQR-DADSAG--RVLKLCLSDGRRQAAAMEYRCVSGFVLEKMAR-GTKLLVSAVEVRRGMLLLTDANTAVLGG 168
            P  A  I   L   G+ LRRDW+ +CL +L    A      + +  +  +  FL  D+     G LPP+V  M  + + GP +LQVDE  N+      R +A  AG  R LKL ++DG ++   MEYR +    LE  A  G+K+++S V VRRG+L+L      +LGG
Sbjct:   47 PASACPISDHLRRLGLSLRRDWLASCLLQLQSSVAAFQRLDAAAKAKLCFEHFLFADMNSCGAGVLPPDVDSMHLRLLPGPYVLQVDEVINICCPLRGRYEAAPAGLKRCLKLSMTDGVQRVFGMEYRPIKA--LEVCASSGSKVVISNVHVRRGLLMLVPETIVILGG 213          
BLAST of mRNA_P-wetherbeei_contig630.1.2 vs. uniprot
Match: A0A836C6Q7_9STRA (RMI1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6Q7_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 7.880e-17
Identity = 61/183 (33.33%), Postives = 88/183 (48.09%), Query Frame = 0
Query:   24 DWIEACLAELAQEAAGGNGQPSGSWEQRVYAMFLLCDLREASEGCLPPNVAGMVKQRIDGPLMLQVDEYKNVAA--------------------------------------AAEQRDADSAGRVLKLCLSDGRRQAAAMEYRCVSGFVLEKMARGTKLLVSAVEVRRGMLLLTDANTAVLGG 168
            DW+  CL  L         +P  +     +A F+  DL EA  GCLPP V  + +Q + G  +LQV  + N++A                                      +AEQRDA+S  R+LKL LSDGR++  A EY  +    +E+++ G KLLV+   VR+GML+L+  NT +LGG
Sbjct:  379 DWLSQCLDALRLA-----NRPVAACAAAAWAQFVAADLGEAGAGCLPPRVCALHRQALSGRFVLQVQAWVNISAVXXXXXXXXXRRLLLKLKLNSVRAVVQALSGPCAVRVQSAEQRDAESGKRMLKLRLSDGRQEVVAFEYGKLPDLKMEQLSVGVKLLVANPYVRQGMLMLSAENTRLLGG 556          
BLAST of mRNA_P-wetherbeei_contig630.1.2 vs. uniprot
Match: A0A812TPV5_9DINO (RMI1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TPV5_9DINO)

HSP 1 Score: 94.0 bits (232), Expect = 3.540e-16
Identity = 58/160 (36.25%), Postives = 86/160 (53.75%), Query Frame = 0
Query:   10 IEHALAERGIKLRRDWIEACLAELAQEAAGGNGQPSGSWEQRVYAMFLLCDLREASEGCLPPNVAGMVKQRIDGPLMLQVDEYKNVAAAAEQRDADSAGRVLKLCLSDGRRQAAAMEYRCVSGFVLEKMARGTKLLVSAVEVRRGMLLLTDANTAVLGGT 169
            I+     +G ++  +WI  C+  LA E     G    + ++ V+   LL D+R+ S+G LPP+   + K+ +    +LQ+DE  N+ A A +   D   R LKL L DG++Q   +EYR +   V  K A G KLLV  V VRRG+ LL   N  +LGG+
Sbjct:    6 IQDEFRAQGCQVSFEWIAQCVKLLAAE-----GTSPEAAQEAVFEQLLLHDIRDWSDGSLPPDAHALHKEVLADKHILQIDEVLNIGAKAAEAQEDVGRRCLKLALCDGQQQVTGIEYRPMPE-VSVKTAAGAKLLVQGVTVRRGVWLLHAGNCKLLGGS 159          
BLAST of mRNA_P-wetherbeei_contig630.1.2 vs. uniprot
Match: A0A2R6PDG9_ACTCC (RecQ-mediated genome instability protein 1 (Fragment) n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6PDG9_ACTCC)

HSP 1 Score: 91.7 bits (226), Expect = 1.850e-15
Identity = 56/159 (35.22%), Postives = 87/159 (54.72%), Query Frame = 0
Query:   14 LAERGIKLRRDWIEACLAELAQEAAGGNGQPSGSWEQRVYAMFLLCDLREASEGCLPPNVAGMVKQRIDGPLMLQVDEYKNVAAAAEQRDADSAG---RVLKLCLSDGRRQAAAMEYRCVSGFVLEKMA-RGTKLLVSAVEVRRGMLLLTDANTAVLGG 168
            LA  G++LRR+W+++C+A L     G  G    +  +  +  FL  D+  +  G LP +V  M    +DGP +LQVDE  N++   + R  ++     R LKL ++DG ++   MEYR + G  LE +A  G K+ +  V +RRG+L+L      VLGG
Sbjct:  121 LARLGLRLRREWLDSCIAGLESSVPGFWGLDVAARGKLCFEQFLYSDMNYSGGGILPEDVHNMHLVDLDGPFILQVDEIVNISCPLKGRYQNAPSGLKRCLKLSMTDGVQRVFGMEYRPIKG--LEVLAPAGLKVAICNVNIRRGLLMLVPEVFEVLGG 277          
BLAST of mRNA_P-wetherbeei_contig630.1.2 vs. uniprot
Match: A0A2R6QGB1_ACTCC (RecQ-mediated genome instability protein 1 n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6QGB1_ACTCC)

HSP 1 Score: 91.3 bits (225), Expect = 2.390e-15
Identity = 52/158 (32.91%), Postives = 85/158 (53.80%), Query Frame = 0
Query:   14 LAERGIKLRRDWIEACLAELAQEAAGGNGQPSGSWEQRVYAMFLLCDLREASEGCLPPNVAGMVKQRIDGPLMLQVDEYKNVAAAAEQRDADSAG---RVLKLCLSDGRRQAAAMEYRCVSGFVLEKMARGTKLLVSAVEVRRGMLLLTDANTAVLGG 168
            L   G++LRR+W+++C+A L     G  G    +  +  +  FL  D+  +  G LP ++  M    +DGP +LQVDE  N++   + R  ++     R LKL ++DG ++   MEYR + G  +  +A G K+ +  V +RRG+L+L      VLGG
Sbjct:  128 LGRLGLRLRREWLDSCIAGLESSVPGFGGFDVATKAKLCFEQFLYSDMNYSGGGILPEDMHNMHLVDLDGPFILQVDEIVNISCPLKGRYQNALSGLKRCLKLSMTDGVQRVFGMEYRPIKGLEVLALA-GLKVAICNVNIRRGLLMLVPEVFEVLGG 284          
BLAST of mRNA_P-wetherbeei_contig630.1.2 vs. uniprot
Match: UPI00053C5BC6 (recQ-mediated genome instability protein 1 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C5BC6)

HSP 1 Score: 90.9 bits (224), Expect = 3.060e-15
Identity = 54/158 (34.18%), Postives = 86/158 (54.43%), Query Frame = 0
Query:   14 LAERGIKLRRDWIEACLAELAQEAAGGNGQPSGSWEQRVYAMFLLCDLREASEGCLPPNVAGMVKQRIDGPLMLQVDEYKNVAAAAEQR-DADSAG--RVLKLCLSDGRRQAAAMEYRCVSGFVLEKMARGTKLLVSAVEVRRGMLLLTDANTAVLGG 168
            L+  G++L+RDW+ ACL EL +     N     +  +  +  FL  D+  +  G LP ++  M    + GP +LQVDE  N+    + R +  +AG  R LKL ++DG ++   MEYR +    +   A G K+++S+V+VR G+L+L      VLGG
Sbjct:  107 LSRMGLRLKRDWLVACLTELERSVPRFNSLDVAAKAKLCFEQFLFSDMNHSGGGVLPRDIRSMHLVELGGPFVLQVDEIVNIGCPLKGRYENANAGLKRCLKLSMTDGVQRVFGMEYRPIKDLQVLDPA-GLKIVISSVQVRHGLLMLVPEVLDVLGG 263          
BLAST of mRNA_P-wetherbeei_contig630.1.2 vs. uniprot
Match: A0A2U1MDY1_ARTAN (RecQ-mediated genome instability protein 1 n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MDY1_ARTAN)

HSP 1 Score: 91.7 bits (226), Expect = 3.120e-15
Identity = 60/163 (36.81%), Postives = 86/163 (52.76%), Query Frame = 0
Query:   10 IEHALAERGIKLRRDWIEACLAELAQEAAGGNGQPSGSWEQRVYAMFLLCDLREASEGCLPPNVAGMVKQRIDGPLMLQVDEYKNVAAAAEQR-DADSAG--RVLKLCLSDGRRQAAAMEYRCVSGFVLEKMA-RGTKLLVSAVEVRRGMLLLTDANTAVLGG 168
            I   L E G++LR +W++ACL  L    AG +G       +  +  FL CD+     G LP NV  M    + GP +LQVDE  N++    QR    +AG  R LKL ++DG ++   MEY+ +    L+ +A  G K+ +S V VR G+L+L      VLGG
Sbjct:  615 IGKVLEELGLRLRGEWLDACLRGLESGVAGFSGLGDTKKAKMCFERFLECDMNLCGAGLLPSNVGRMHLVDLPGPFVLQVDEIVNISQPLRQRYKTANAGFHRCLKLSMTDGVQRVFGMEYQPIKD--LDALAPAGLKVAISNVNVRHGLLMLVPEVIQVLGG 775          
BLAST of mRNA_P-wetherbeei_contig630.1.2 vs. uniprot
Match: A0A2N9J515_FAGSY (DUF1767 domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J515_FAGSY)

HSP 1 Score: 87.8 bits (216), Expect = 4.990e-15
Identity = 53/159 (33.33%), Postives = 81/159 (50.94%), Query Frame = 0
Query:   14 LAERGIKLRRDWIEACLAELAQEAAGGNGQPSGSWEQRVYAMFLLCDLREASEGCLPPNVAGMVKQRIDGPLMLQVDEYKNVAAAAE---QRDADSAGRVLKLCLSDGRRQAAAMEYRCVSGFVLEKMA-RGTKLLVSAVEVRRGMLLLTDANTAVLGG 168
            L   G+KL+ +W+EACL  L     G       +  +  +  FL+ D+     G LP NV  M    + GP +LQ+DE  N++   +   Q+ A    R LKL ++DG ++   MEYR +    L+ +A  G K+ +  V +RRG+L+L      VLGG
Sbjct:  114 LGRLGLKLKTEWLEACLDALQSSVPGFASLSVDAKAKLCFERFLVSDMNHCGNGVLPHNVDSMHLVDLPGPYVLQIDEIVNISCPLKGRYQKSAPGIKRCLKLSMTDGVQRVFGMEYRTIQA--LDALAPAGLKVAICNVHIRRGLLMLVPEAFEVLGG 270          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig630.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTE9_ECTSI8.580e-2845.86RecQ-mediated genome instability protein 1 n=2 Tax... [more]
A0A2P6TY87_CHLSO7.360e-1839.13RecQ-mediated genome instability protein 1 n=1 Tax... [more]
A0A151RRF7_CAJCA1.980e-1736.09RecQ-mediated genome instability protein 1 n=3 Tax... [more]
A0A836C6Q7_9STRA7.880e-1733.33RMI1_N domain-containing protein n=1 Tax=Tribonema... [more]
A0A812TPV5_9DINO3.540e-1636.25RMI1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A2R6PDG9_ACTCC1.850e-1535.22RecQ-mediated genome instability protein 1 (Fragme... [more]
A0A2R6QGB1_ACTCC2.390e-1532.91RecQ-mediated genome instability protein 1 n=2 Tax... [more]
UPI00053C5BC63.060e-1534.18recQ-mediated genome instability protein 1 n=1 Tax... [more]
A0A2U1MDY1_ARTAN3.120e-1536.81RecQ-mediated genome instability protein 1 n=2 Tax... [more]
A0A2N9J515_FAGSY4.990e-1533.33DUF1767 domain-containing protein n=1 Tax=Fagus sy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033472RecQ mediated genome instability protein, DUF1767SMARTSM01161DUF1767_2coord: 11..104
e-value: 3.7E-18
score: 76.3
IPR013894RecQ mediated genome instability protein, N-terminalPFAMPF08585RMI1_Ncoord: 15..170
e-value: 1.1E-26
score: 94.0
IPR042470RecQ mediated genome instability protein, N-terminal, subdomain 2GENE3D2.40.50.770coord: 60..176
e-value: 2.5E-20
score: 74.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 699..742
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 490..556
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..326
NoneNo IPR availablePANTHERPTHR14790:SF15RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1coord: 8..169
IPR039215RecQ-mediated genome instability protein 1PANTHERPTHR14790RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1coord: 8..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig630contigP-wetherbeei_contig630:4473..7929 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig630.1.2mRNA_P-wetherbeei_contig630.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig630 4415..7929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig630.1.2 ID=prot_P-wetherbeei_contig630.1.2|Name=mRNA_P-wetherbeei_contig630.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=742bp
MMRPEQAATIEHALAERGIKLRRDWIEACLAELAQEAAGGNGQPSGSWEQ
RVYAMFLLCDLREASEGCLPPNVAGMVKQRIDGPLMLQVDEYKNVAAAAE
QRDADSAGRVLKLCLSDGRRQAAAMEYRCVSGFVLEKMARGTKLLVSAVE
VRRGMLLLTDANTAVLGGTTALLADGGCATAGGGGAAADGGSVGSTTSIA
GVANSGGASGGNGGGANGGGANGDNSGYGPNGQPPRPDSSVGHAERRDRQ
GARSGIMPPPRKPQQQPGAADGGSGGRTGGSDDGGGSGGGARISPVSGAS
NPYARTSAGEGPIRNGATTVTPAGARPVLPVPVTPAMRPAASYGAGGAGA
AANPYGSSSGLRVSYPPLAAATEGMPLAVMTASCGIGSGDGGGGSGGARD
IEDFDLYLLEMEEADNVVAGSGAAGHGGGNKNTETIGYTTGGSLDGTVNT
GVAGNGVGTGPLRRLHPVVPSPSFVTAKSAMKVEAAAAADKSPDVGAKRA
TPPQHAATSEGLPKRPKAATLLPLPPLPRRPTSAGGSSPASSGIRGGIHG
GGAGGSSNGSLPTADCLATRSAVPSVAVALSRLAEHAGAMVLVVASVVEA
QHMALRNKKFRVCRWQVLLCILPSVPVRVKLRDDDGTVIDAILGDAVMRP
MFGMDAKEYKRLHKKDPARCAEVTVRVEGMLQTLAGLMHLQVPPGAAGGG
VEWAGDAPSTQASEDSTDGPALPEVLLVAQRSGPAQRAGGGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033472DUF1767
IPR013894RMI1_N
IPR042470RMI1_N_2
IPR039215RMI1