mRNA_P-wetherbeei_contig6266.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6266.2.1 vs. uniprot
Match: A0A1F3Z5P9_9PROT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_67_12 TaxID=1797483 RepID=A0A1F3Z5P9_9PROT) HSP 1 Score: 333 bits (853), Expect = 3.580e-110 Identity = 177/250 (70.80%), Postives = 196/250 (78.40%), Query Frame = 1
Query: 1 IEEGRRIADPRFSITHAHFSELGGVLDALGVAQLHGALFDLGVSSPQLDEASRGFSFRMDGPLDMRMDPTRGESAAEWLARANESDIREVIKDYGEERFAKQIAAAIVAARATEPLGRTRQLAHLVGEAVRTREAGQDPATRTFQALRIFINRELEEVSLSLPIAASRLVPGGRLAVISFHSLEDRIAKRFIRDAGAADLPRDLPLRADQLPQPLLMPVGRAIKASTGEVRANPRSRSATLRIAERTEAP 750
+ I+DPRFSI HA FSEL VLDA +HG L DLG SSPQL++A+RGFSFR DGPLDMRMDPTRG SAA+WLA A E IRE I+ YGEERFAKQIAAAIVAARA EPL RTRQLA LV AVRTREAGQ+PATRTFQALRI +NRELEEVSL LP A +RL PGGRL V SFHSLEDRI KRF+R LPRDLP+RA ++PQP L VGRA++ EV ANPR+RSA LR+AERTEAP
Sbjct: 62 VRAAGEISDPRFSIAHASFSELARVLDAQRARLVHGVLADLGASSPQLEDAARGFSFRADGPLDMRMDPTRGVSAADWLAAATEPQIREAIEQYGEERFAKQIAAAIVAARAREPLVRTRQLADLVAAAVRTREAGQNPATRTFQALRILVNRELEEVSLMLPQAVARLAPGGRLVVASFHSLEDRIVKRFLRSLARPALPRDLPIRASEMPQPALRIVGRAVRPGAREVAANPRARSAVLRVAERTEAP 311
BLAST of mRNA_P-wetherbeei_contig6266.2.1 vs. uniprot
Match: A0A1F4BM66_9PROT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_19 TaxID=1797491 RepID=A0A1F4BM66_9PROT) HSP 1 Score: 325 bits (833), Expect = 3.580e-107 Identity = 169/250 (67.60%), Postives = 196/250 (78.40%), Query Frame = 1
Query: 1 IEEGRRIADPRFSITHAHFSELGGVLDALGVAQLHGALFDLGVSSPQLDEASRGFSFRMDGPLDMRMDPTRGESAAEWLARANESDIREVIKDYGEERFAKQIAAAIVAARATEPLGRTRQLAHLVGEAVRTREAGQDPATRTFQALRIFINRELEEVSLSLPIAASRLVPGGRLAVISFHSLEDRIAKRFIRDAGAADLPRDLPLRADQLPQPLLMPVGRAIKASTGEVRANPRSRSATLRIAERTEAP 750
++ R+I D RFS+ HA FSEL VLDA G +HG L DLGVSSPQLD+ +RGFSFR DGPLDMRMDPTRG SAA+WLA A ES+I+ VI+DYGEERFAKQIA +VAARA P+ TRQLA LVG+AVRTREAGQDPATRTFQALRI +NRELEEVSL LP A +RL PGGRLAV+SFHSLEDRI KRF+R LPRDLP+RA ++PQ L + R ++A E NPR+RSA LR+AERT+ P
Sbjct: 60 VDAARKIVDARFSVAHAPFSELSRVLDAQGARLVHGVLADLGVSSPQLDDPARGFSFRADGPLDMRMDPTRGVSAADWLATAAESEIKGVIRDYGEERFAKQIAKTLVAARAARPIRGTRQLADLVGQAVRTREAGQDPATRTFQALRILVNRELEEVSLMLPQAVARLAPGGRLAVLSFHSLEDRIVKRFMRALAQPTLPRDLPIRASEMPQAALRILARPVRAGAAERAVNPRARSAVLRVAERTDVP 309
BLAST of mRNA_P-wetherbeei_contig6266.2.1 vs. uniprot
Match: A0A1F4F371_9PROT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4F371_9PROT) HSP 1 Score: 322 bits (825), Expect = 6.220e-106 Identity = 170/250 (68.00%), Postives = 198/250 (79.20%), Query Frame = 1
Query: 1 IEEGRRIADPRFSITHAHFSELGGVLDALGVAQLHGALFDLGVSSPQLDEASRGFSFRMDGPLDMRMDPTRGESAAEWLARANESDIREVIKDYGEERFAKQIAAAIVAARATEPLGRTRQLAHLVGEAVRTREAGQDPATRTFQALRIFINRELEEVSLSLPIAASRLVPGGRLAVISFHSLEDRIAKRFIRDAGAADLPRDLPLRADQLPQPLLMPVGRAIKASTGEVRANPRSRSATLRIAERTEAP 750
+ + +AD RFSI HA FSELG VLD+ V +HG L DLG+SSPQLD +RGFSFR DGPLDMRMDPTRGESAA+WLA A +++IRE I+++GEERFAKQIAAA+VAARA EP+ RT+QLA LV AVRTREAGQDPATRTFQALRI +NRELEEVSL LP A RL GGRLAV+SFHSLEDRI KRF+R LPRDLP+RA ++P L VGR ++ E+ ANPR+RSA LR+AERTEAP
Sbjct: 62 VAAAQTLADARFSIVHAPFSELGRVLDSARVPLVHGVLADLGMSSPQLDTPARGFSFRRDGPLDMRMDPTRGESAAQWLASATQTEIREAIENHGEERFAKQIAAALVAARAREPIVRTQQLADLVAAAVRTREAGQDPATRTFQALRILVNRELEEVSLMLPQAVVRLAAGGRLAVVSFHSLEDRIVKRFMRALAQPALPRDLPIRASEMPPAALRIVGRPVRPGEAELAANPRARSAVLRVAERTEAP 311
BLAST of mRNA_P-wetherbeei_contig6266.2.1 vs. uniprot
Match: A0A1F3Y977_9PROT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3Y977_9PROT) HSP 1 Score: 322 bits (825), Expect = 6.220e-106 Identity = 168/249 (67.47%), Postives = 196/249 (78.71%), Query Frame = 1
Query: 1 IEEGRRIADPRFSITHAHFSELGGVLDALGVAQLHGALFDLGVSSPQLDEASRGFSFRMDGPLDMRMDPTRGESAAEWLARANESDIREVIKDYGEERFAKQIAAAIVAARATEPLGRTRQLAHLVGEAVRTREAGQDPATRTFQALRIFINRELEEVSLSLPIAASRLVPGGRLAVISFHSLEDRIAKRFIRDAGAADLPRDLPLRADQLPQPLLMPVGRAIKASTGEVRANPRSRSATLRIAERTEA 747
IE R I DPRF+ HA FSE VLD G+ Q+HG L DLGVSSPQL + +RGFSFR DGPLDMRMDP+RG SAA+WLA A+E IRE I YGEERFAKQ+A AIVAARA EP+ RT QLA +V AVRTREAGQ+PATRTFQALRI +NRELEE++L LP A +RL PGGRLAVISFHSLEDR+ KRF+R + LP DLP+RA +LPQP L +G+A++AS E+ ANPR+RSATLR AER+ A
Sbjct: 62 IEAARAITDPRFAAEHAPFSEFAQVLDRRGIGQVHGVLADLGVSSPQLADPARGFSFRADGPLDMRMDPSRGVSAADWLATASEQQIREAIGGYGEERFAKQVAKAIVAARAREPIRRTEQLAAVVAAAVRTREAGQNPATRTFQALRILVNRELEEIALMLPQAVARLTPGGRLAVISFHSLEDRLVKRFLRACSESGLPADLPIRASELPQPPLRILGKAVRASAAEIAANPRARSATLRAAERSSA 310
BLAST of mRNA_P-wetherbeei_contig6266.2.1 vs. uniprot
Match: A0A1F4EYC5_9PROT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4EYC5_9PROT) HSP 1 Score: 321 bits (822), Expect = 1.500e-105 Identity = 170/249 (68.27%), Postives = 192/249 (77.11%), Query Frame = 1
Query: 13 RRIADPRFSITHAHFSELGGVLDALGVAQLHGALFDLGVSSPQLDEASRGFSFRMDGPLDMRMDPTRGESAAEWLARANESDIREVIKDYGEERFAKQIAAAIVAARATEPLGRTRQLAHLVGEAVRTREAGQDPATRTFQALRIFINRELEEVSLSLPIAASRLVPGGRLAVISFHSLEDRIAKRFIRDAGAADLPRDLPLRADQLPQPLLMPVGRAIKASTGEVRANPRSRSATLRIAERTEAPWRN 759
R I DPRF+ +F L LDA GV G LFDLG SSPQ D+ SRGFSFR DGPLDMRMDPT G SAA+WLA A+E +I EVI+ YGEERFAKQIA AIVAAR EPL RTRQLA LV +AVRTRE GQDPATRTFQALRI +NRELEEVSL LP A RL PGGRLAVISFHSLEDRI KRF+RDA LPR+LPL A ++PQ +GRAI+ + E+ ANPR+RSATLR+AERT AP+++
Sbjct: 60 REIPDPRFTFVRKNFGALSAALDACGVRLAQGMLFDLGASSPQFDDPSRGFSFRADGPLDMRMDPTEGTSAADWLAAASEKEIAEVIRGYGEERFAKQIAKAIVAARGREPLARTRQLADLVAKAVRTREPGQDPATRTFQALRIHVNRELEEVSLMLPQALERLAPGGRLAVISFHSLEDRIVKRFMRDAAQPALPRELPLTASEMPQAPAKLIGRAIRPAADEIAANPRARSATLRVAERTAAPYQS 308
BLAST of mRNA_P-wetherbeei_contig6266.2.1 vs. uniprot
Match: UPI00135842F8 (16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH n=1 Tax=Andreprevotia sp. IGB-42 TaxID=2497473 RepID=UPI00135842F8) HSP 1 Score: 319 bits (817), Expect = 5.560e-105 Identity = 168/250 (67.20%), Postives = 197/250 (78.80%), Query Frame = 1
Query: 1 IEEGRRIADPRFSITHAHFSELGGVLDALGVAQLHGALFDLGVSSPQLDEASRGFSFRMDGPLDMRMDPTRGESAAEWLARANESDIREVIKDYGEERFAKQIAAAIVAARATEPLGRTRQLAHLVGEAVRTREAGQDPATRTFQALRIFINRELEEVSLSLPIAASRLVPGGRLAVISFHSLEDRIAKRFIRDAGAADLPRDLPLRADQLPQPLLMPVGRAIKASTGEVRANPRSRSATLRIAERTEAP 750
I E + IADPRF+I H F L LD LG+ Q++G L DLGVSSPQLD+ SRGFSFR D PLDMRMD TRG +AA+WL A+E DI EV++DYGEERFAKQ+AAAIVA R +P TR+LA +V AVRTRE GQDPATRTFQA+RIFINRELEE++L LP A SRLVPGGRL+VI+FHSLEDRI KRF++DA DLP LP+RA +P+P L PVG+ I+AS EV ANPR+RSA LR+AERT AP
Sbjct: 59 IAEAQTIADPRFTIVHDGFRTLAQSLDDLGIQQINGLLLDLGVSSPQLDDGSRGFSFRFDAPLDMRMDTTRGITAADWLNSADEKDIAEVVRDYGEERFAKQVAAAIVARRLEQPFSTTRELAAVVATAVRTREPGQDPATRTFQAVRIFINRELEELALILPQALSRLVPGGRLSVIAFHSLEDRIVKRFVQDASKNDLPDRLPVRAADIPEPPLKPVGKPIRASKDEVDANPRARSAILRVAERTGAP 308
BLAST of mRNA_P-wetherbeei_contig6266.2.1 vs. uniprot
Match: A0A537CK98_9PROT (Ribosomal RNA small subunit methyltransferase H n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537CK98_9PROT) HSP 1 Score: 319 bits (817), Expect = 8.290e-105 Identity = 169/247 (68.42%), Postives = 193/247 (78.14%), Query Frame = 1
Query: 13 RRIADPRFSITHAHFSELGGVLDALGVAQLHGALFDLGVSSPQLDEASRGFSFRMDGPLDMRMDPTRGESAAEWLARANESDIREVIKDYGEERFAKQIAAAIVAARATEPLGRTRQLAHLVGEAVRTREAGQDPATRTFQALRIFINRELEEVSLSLPIAASRLVPGGRLAVISFHSLEDRIAKRFIRDAGAADLPRDLPLRADQLPQPLLMPVGRAIKASTGEVRANPRSRSATLRIAERTEAPW 753
R + D RF +F L LDA GV HG LFDLG+SSPQLD+ +RGFSFR DGPLDMRMDP G SAA+WLA A E +IR VI+DYGEERFAKQIAAAIVAAR+ P+ RTRQLA LVG+AVRTRE GQDPATRTFQALRI +NRELEEVSL LP A +RL GGRLAVISF SLEDRI KRF++ A D+PR+LPLRA ++PQP L +GRAI+ S E ANPR+RSATLR+AERT AP+
Sbjct: 60 RELRDGRFMFLKHNFGTLSAALDAAGVRSAHGMLFDLGISSPQLDDPARGFSFRADGPLDMRMDPGEGVSAAQWLATAEEQEIRRVIRDYGEERFAKQIAAAIVAARSRGPIVRTRQLADLVGQAVRTREPGQDPATRTFQALRIHLNRELEEVSLMLPQAVARLASGGRLAVISFQSLEDRIVKRFMQHAARPDVPRELPLRAIEMPQPALKLIGRAIRPSAAETAANPRARSATLRVAERTAAPY 306
BLAST of mRNA_P-wetherbeei_contig6266.2.1 vs. uniprot
Match: A0A2R5EJI3_9RHOO (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Azospira sp. I13 TaxID=1765050 RepID=A0A2R5EJI3_9RHOO) HSP 1 Score: 318 bits (814), Expect = 2.210e-104 Identity = 170/252 (67.46%), Postives = 197/252 (78.17%), Query Frame = 1
Query: 1 IEEGRRIADPRFSITHAHFSELGGVLDALGVAQLHGALFDLGVSSPQLDEASRGFSFRMDGPLDMRMDPTRGESAAEWLARANESDIREVIKDYGEERFAKQIAAAIVAARATEPLGRTRQLAHLVGEAVRTREAGQDPATRTFQALRIFINRELEEVSLSLPIAASRLVPGGRLAVISFHSLEDRIAKRFIRDAG--AADLPRDLPLRADQLPQPLLMPVGRAIKASTGEVRANPRSRSATLRIAERTEAP 750
I G +I D RFS+ H FS++ VL G+ + G L D+GVSSPQ+DE RGFSFR D PLDMRMD TRGE+AAEWLARA E DI EVI+DYGEERFAKQIA IVAAR+ P+ TRQLA LV EAVRTRE GQDPATR+FQA+RI IN+ELEE+SL+L A + L PGGRLAVISFHSLEDRI K F+RD AA++P+ LPLRADQLPQP L VG+AI+AS EV ANPRSRSA +R+AERTE+P
Sbjct: 62 IAAGAQIQDQRFSLHHTPFSDMAEVLQQQGIGLVDGVLLDIGVSSPQIDEGERGFSFRFDAPLDMRMDTTRGETAAEWLARAEEKDIAEVIRDYGEERFAKQIAKKIVAARSERPIATTRQLAALVAEAVRTREPGQDPATRSFQAIRIHINQELEELSLALSQALALLKPGGRLAVISFHSLEDRIVKNFLRDQAEPAANVPKGLPLRADQLPQPTLRLVGKAIRASAAEVAANPRSRSAIMRVAERTESP 313
BLAST of mRNA_P-wetherbeei_contig6266.2.1 vs. uniprot
Match: A0A0S8BA07_9PROT (Ribosomal RNA small subunit methyltransferase H n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8BA07_9PROT) HSP 1 Score: 318 bits (814), Expect = 2.780e-104 Identity = 169/250 (67.60%), Postives = 191/250 (76.40%), Query Frame = 1
Query: 1 IEEGRRIADPRFSITHAHFSELGGVLDALGVAQLHGALFDLGVSSPQLDEASRGFSFRMDGPLDMRMDPTRGESAAEWLARANESDIREVIKDYGEERFAKQIAAAIVAARATEPLGRTRQLAHLVGEAVRTREAGQDPATRTFQALRIFINRELEEVSLSLPIAASRLVPGGRLAVISFHSLEDRIAKRFIRDAGAADLPRDLPLRADQLPQPLLMPVGRAIKASTGEVRANPRSRSATLRIAERTEAP 750
+ + + DPR HA L LDA GV G LFDLGVSSPQLD+ +RGFSFR DGPLDMRMDP+ G+SAA+WLA A E +IREVI+DYGEERFAKQIAAAIV ARA+EP+ TRQLA LVG AVRTRE GQDPATRTFQALRIF+NRELEEVSL LP A +RL GGRLAVISFHSLEDRI KRF A +LP DLP+RA ++P PLL VGRA + S E+ NPR+RSA LR+AERT AP
Sbjct: 62 VAAAQALGDPRLLAVHAAMRSLAATLDAAGVQGADGMLFDLGVSSPQLDDPARGFSFRADGPLDMRMDPSYGDSAAQWLATAAEPEIREVIRDYGEERFAKQIAAAIVVARASEPIRTTRQLADLVGSAVRTREPGQDPATRTFQALRIFVNRELEEVSLMLPQAVARLAAGGRLAVISFHSLEDRIVKRFFAGAARPELPADLPIRASEMPAPLLRLVGRAQRPSAAELAENPRARSALLRVAERTAAP 311
BLAST of mRNA_P-wetherbeei_contig6266.2.1 vs. uniprot
Match: G8QMT5_AZOOP (Ribosomal RNA small subunit methyltransferase H n=5 Tax=Betaproteobacteria TaxID=28216 RepID=G8QMT5_AZOOP) HSP 1 Score: 314 bits (804), Expect = 7.200e-103 Identity = 168/252 (66.67%), Postives = 197/252 (78.17%), Query Frame = 1
Query: 1 IEEGRRIADPRFSITHAHFSELGGVLDALGVAQLHGALFDLGVSSPQLDEASRGFSFRMDGPLDMRMDPTRGESAAEWLARANESDIREVIKDYGEERFAKQIAAAIVAARATEPLGRTRQLAHLVGEAVRTREAGQDPATRTFQALRIFINRELEEVSLSLPIAASRLVPGGRLAVISFHSLEDRIAKRFIRDAG--AADLPRDLPLRADQLPQPLLMPVGRAIKASTGEVRANPRSRSATLRIAERTEAP 750
I G I D RFS+ H FSE+G VL G+ + G L D+GVSSPQ+DE RGFSFR D PLDMRMD TRGE+AAEWLARA+E++I EVI+DYGEERFAKQIA IVAAR+ P+ TRQLA LV EAVRTRE GQDPATR+FQA+RI IN+EL+E+SL+L A + L PGGRLAVISFHSLEDRI K F+RD A+ LP+ LPLRADQLPQP L+ VG+A++AS EV ANPRSRSA +R+AERT P
Sbjct: 62 IAAGASIQDKRFSLHHTPFSEMGEVLQQQGIGLVDGVLLDIGVSSPQIDEGERGFSFRFDAPLDMRMDTTRGETAAEWLARADETEIAEVIRDYGEERFAKQIAKKIVAARSERPVATTRQLAALVAEAVRTREPGQDPATRSFQAIRIHINQELQELSLALSQALALLKPGGRLAVISFHSLEDRIVKNFLRDQAEPASHLPKGLPLRADQLPQPTLVLVGKAVRASREEVAANPRSRSAIMRVAERTAVP 313 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6266.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6266.2.1 >prot_P-wetherbeei_contig6266.2.1 ID=prot_P-wetherbeei_contig6266.2.1|Name=mRNA_P-wetherbeei_contig6266.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp MDGPLDMRMDPTRGESAAEWLARANESDIREVIKDYGEERFAKQIAAAIVback to top mRNA from alignment at P-wetherbeei_contig6266:2478..3505- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6266.2.1 ID=mRNA_P-wetherbeei_contig6266.2.1|Name=mRNA_P-wetherbeei_contig6266.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1028bp|location=Sequence derived from alignment at P-wetherbeei_contig6266:2478..3505- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6266:2478..3505- >mRNA_P-wetherbeei_contig6266.2.1 ID=mRNA_P-wetherbeei_contig6266.2.1|Name=mRNA_P-wetherbeei_contig6266.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=588bp|location=Sequence derived from alignment at P-wetherbeei_contig6266:2478..3505- (Phaeothamnion wetherbeei SAG_119_79)back to top |