prot_P-wetherbeei_contig626.5.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig626.5.1
Unique Nameprot_P-wetherbeei_contig626.5.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length200
Homology
BLAST of mRNA_P-wetherbeei_contig626.5.1 vs. uniprot
Match: A0A6G0WJQ4_9STRA (H/ACA ribonucleoprotein complex non-core subunit NAF1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJQ4_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.020e-9
Identity = 37/92 (40.22%), Postives = 54/92 (58.70%), Query Frame = 0
Query:   58 RALGVVTEIFGPVTCPCYVVHVGSLNEVPRHVQIGSIAYVVKEMPNEVLDGSCFERGRGCDASNAFDEEAGDNEADFSDDEKEQLAKKTKGK 149
            + LG V E+FGPV+ P Y++   +  ++P    + +  +   E    V    C  R +G DASN +DEE GD+E +FSDDE EQ AK++K K
Sbjct:  179 QVLGCVDEVFGPVSLPLYLIRFETAEDIPEAATLHADVFYATEHATYVQPEKC--RVKGSDASNLYDEEPGDDEMEFSDDEAEQSAKRSKRK 268          
BLAST of mRNA_P-wetherbeei_contig626.5.1 vs. uniprot
Match: A0A163LTT2_ABSGL (H/ACA ribonucleoprotein complex non-core subunit NAF1 n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A163LTT2_ABSGL)

HSP 1 Score: 64.7 bits (156), Expect = 9.330e-9
Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 0
Query:   60 LGVVTEIFGPVTCPCYVVHVGSLNEVPRHVQIGS-IAYVVKEMPNEVLDGSCFERGRGCDASNAFDEEAGDNEADFSDDEKEQLAKKTK 147
            LG V E FGPV  P Y V   S++E+P   + G+ +AYV      +++     +  +G DASN FDEEAGD+E +FSDDE+E    ++K
Sbjct:  162 LGEVFETFGPVDRPFYSVRFNSMDEIPSAAKSGARVAYVPSYARTQLVQVEKLKLLKGTDASNRFDEEAGDDELEFSDDEQEMAYNRSK 250          
BLAST of mRNA_P-wetherbeei_contig626.5.1 vs. uniprot
Match: A0A0B7N6G5_9FUNG (H/ACA ribonucleoprotein complex non-core subunit NAF1 n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7N6G5_9FUNG)

HSP 1 Score: 62.4 bits (150), Expect = 5.900e-8
Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 0
Query:   58 RALGVVTEIFGPVTCPCYVVHVGSLNEVPRHV-QIGSIAYVVKE-MPNEVLDGSCFERGRGCDASNAFDEEAGDNEADFSDDEKEQLAKK 145
            + LG V E FGPV CP Y V      E+ + + ++G   Y V      ++++     + +G DASN +DEE G++E +FSDDEKE   KK
Sbjct:  197 QVLGEVFETFGPVACPYYSVRFNDAKEIDKELAKVGQEVYFVPSYQKTQIVETEKLRKMKGTDASNVYDEEIGEDEMEFSDDEKEMEYKK 286          
BLAST of mRNA_P-wetherbeei_contig626.5.1 vs. uniprot
Match: A0A5J4Z561_PORPP (H/ACA ribonucleoprotein complex non-core subunit NAF1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z561_PORPP)

HSP 1 Score: 62.0 bits (149), Expect = 8.360e-8
Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 0
Query:   59 ALGVVTEIFGPVTCPCYVVHVGSLNEVPRH-VQIGSIAYVVKEMPNEVLDGSCFERGRGCDASNAFDEEAGDNEADFSDDEKEQLAKKTK 147
            A+G V E FGPV  P Y +   S  ++ +  V +G   Y+V E+   VL  S   R RGCDASN +DEE    + +FSDDE E  A +TK
Sbjct:  276 AIGKVFETFGPVARPYYSLRFASAEQIQKKGVAVGCAVYLVPELSRFVLPDSI--RTRGCDASNFYDEEIDAEQLEFSDDEAESAALRTK 363          
BLAST of mRNA_P-wetherbeei_contig626.5.1 vs. uniprot
Match: A0A418FHY6_9STRA (H/ACA ribonucleoprotein complex subunit (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418FHY6_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.150e-7
Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = 0
Query:   60 LGVVTEIFGPVTCPCYVVHVGSLNEVPRHVQIGSIAYVVKEMPNEVLDGSCFERGRGCDASNAFDEEAGDNEADFSDDEKEQLAKKTKGK 149
            LG+V E+FGPV+ P Y++   + +E+P    + +      E    V    C  R +G DASN +DEE   +E ++SDDE EQ AKK+K K
Sbjct:  173 LGLVDEVFGPVSLPLYLIRFETADEIPAGAILHADVLYASEHATYVQADKC--RIKGSDASNLYDEEPAADEMEYSDDEAEQSAKKSKRK 260          
BLAST of mRNA_P-wetherbeei_contig626.5.1 vs. uniprot
Match: A0A1R3J116_COCAP (H/ACA ribonucleoprotein complex non-core subunit NAF1 n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3J116_COCAP)

HSP 1 Score: 61.2 bits (147), Expect = 1.480e-7
Identity = 42/81 (51.85%), Postives = 49/81 (60.49%), Query Frame = 0
Query:   60 LGVVTEIFGPVTCPCYVVHVGSLNEVPRHVQIGSIAYVVKEMPNEVLDGSCFERGRGCDASNAFDEEAGDNEADFSDDEKE 140
            LG+V EIFGPVT P YVV   S  EVP  +Q G+    V E  N VL+ S   + +G DAS   DEE  D  A+FSDDEKE
Sbjct:  173 LGLVDEIFGPVTNPYYVVRYDSEIEVPAGIQEGTSISFVPEFANHVLNDSNLYK-KGYDASGENDEELSD-PAEFSDDEKE 251          
BLAST of mRNA_P-wetherbeei_contig626.5.1 vs. uniprot
Match: A0A1R3KFH5_9ROSI (H/ACA ribonucleoprotein complex non-core subunit NAF1 n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3KFH5_9ROSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.530e-7
Identity = 42/81 (51.85%), Postives = 49/81 (60.49%), Query Frame = 0
Query:   60 LGVVTEIFGPVTCPCYVVHVGSLNEVPRHVQIGSIAYVVKEMPNEVLDGSCFERGRGCDASNAFDEEAGDNEADFSDDEKE 140
            LG+V EIFGPVT P YVV   S  EVP  +Q G+    V E  N VL+ S   + +G DAS   DEE  D  A+FSDDEKE
Sbjct:  187 LGLVDEIFGPVTNPYYVVRYDSEIEVPAGIQEGTSISFVPEFANHVLNDSNLYK-KGYDASGENDEELSD-PAEFSDDEKE 265          
BLAST of mRNA_P-wetherbeei_contig626.5.1 vs. uniprot
Match: A0A1R3K746_COCAP (H/ACA ribonucleoprotein complex non-core subunit NAF1 n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3K746_COCAP)

HSP 1 Score: 59.3 bits (142), Expect = 7.180e-7
Identity = 42/86 (48.84%), Postives = 50/86 (58.14%), Query Frame = 0
Query:   60 LGVVTEIFGPVTCPCYVVHVGSLNEVPRHVQIGSIAYVVKEMPNEVLDGSCFERGRGCDASNAFDEEAGDNEADFSDDEKEQLAKK 145
            LG+V EIFGPVT P YVV   S  EVP  +  G+    V E  N VL+ +   + +G DAS   DEE  D  A+FSDDEKE   KK
Sbjct:  310 LGLVDEIFGPVTNPYYVVRYNSEIEVPAGIHEGTSISFVPEFANHVLNDNNLYK-KGYDASGENDEELSDY-AEFSDDEKEAEYKK 393          
BLAST of mRNA_P-wetherbeei_contig626.5.1 vs. uniprot
Match: A0A8H7QZE5_9FUNG (H/ACA ribonucleoprotein complex non-core subunit NAF1 n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QZE5_9FUNG)

HSP 1 Score: 58.9 bits (141), Expect = 8.510e-7
Identity = 36/96 (37.50%), Postives = 52/96 (54.17%), Query Frame = 0
Query:   60 LGVVTEIFGPVTCPCYVVHVGSLNEVPRHV-QIG-SIAYVVKEMPNEVLDGSCFERGRGCDASNAFDEEAGDNEADFSDDEKEQLAKKTKGKGKVL 153
            +G V E FGPV  P Y V      E+     +IG S+ YV      ++++     + +G DASN +DEE G+ E +FSDDEKE   KK + + K +
Sbjct:  176 MGEVFETFGPVARPYYSVRFNDAKEINEEFGKIGASVYYVPTYQKTQIVETEALRKIKGTDASNVYDEEVGEEEMEFSDDEKEMQFKKKRNREKKM 271          
BLAST of mRNA_P-wetherbeei_contig626.5.1 vs. uniprot
Match: A0A2Z6RMM8_9GLOM (H/ACA ribonucleoprotein complex subunit n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6RMM8_9GLOM)

HSP 1 Score: 58.2 bits (139), Expect = 9.540e-7
Identity = 38/83 (45.78%), Postives = 46/83 (55.42%), Query Frame = 0
Query:   60 LGVVTEIFGPVTCPCYVVHVGSLNEVPRHVQIGSIA-YVVKEMPNEVLDGSCFERGRGCDASNAFDEEAGDNEADFSDDEKEQ 141
            LG + E  GPV  P YVV     NE+ +   I     + V E+   V     FE  +GCDASNAFDEE  + E +FSDDEKEQ
Sbjct:  122 LGEIFETIGPVAHPMYVVR---FNEIDKEKVIKDAKIFSVDELSKFVFTREIFEH-KGCDASNAFDEEVNEEEIEFSDDEKEQ 200          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig626.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6G0WJQ4_9STRA1.020e-940.22H/ACA ribonucleoprotein complex non-core subunit N... [more]
A0A163LTT2_ABSGL9.330e-942.70H/ACA ribonucleoprotein complex non-core subunit N... [more]
A0A0B7N6G5_9FUNG5.900e-838.89H/ACA ribonucleoprotein complex non-core subunit N... [more]
A0A5J4Z561_PORPP8.360e-843.33H/ACA ribonucleoprotein complex non-core subunit N... [more]
A0A418FHY6_9STRA1.150e-740.00H/ACA ribonucleoprotein complex subunit (Fragment)... [more]
A0A1R3J116_COCAP1.480e-751.85H/ACA ribonucleoprotein complex non-core subunit N... [more]
A0A1R3KFH5_9ROSI1.530e-751.85H/ACA ribonucleoprotein complex non-core subunit N... [more]
A0A1R3K746_COCAP7.180e-748.84H/ACA ribonucleoprotein complex non-core subunit N... [more]
A0A8H7QZE5_9FUNG8.510e-737.50H/ACA ribonucleoprotein complex non-core subunit N... [more]
A0A2Z6RMM8_9GLOM9.540e-745.78H/ACA ribonucleoprotein complex subunit n=2 Tax=Rh... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038664H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domainGENE3D2.40.10.230Probable tRNA pseudouridine synthase domaincoord: 39..99
e-value: 4.1E-5
score: 25.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..49
NoneNo IPR availablePANTHERPTHR31633:SF1H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1coord: 59..149
IPR040309H/ACA ribonucleoprotein complex non-core subunit Naf1PANTHERPTHR31633H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1coord: 59..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig626contigP-wetherbeei_contig626:8749..9348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig626.5.1mRNA_P-wetherbeei_contig626.5.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig626 8749..9348 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig626.5.1 ID=prot_P-wetherbeei_contig626.5.1|Name=mRNA_P-wetherbeei_contig626.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=200bp
CGAGGAAAAAVAAKAKKNPKRSDGGDGCEFSDEYDDDEEVDSDEDREPTK
LYDPLWPRALGVVTEIFGPVTCPCYVVHVGSLNEVPRHVQIGSIAYVVKE
MPNEVLDGSCFERGRGCDASNAFDEEAGDNEADFSDDEKEQLAKKTKGKG
KVLFGVLVGEAGAKGFGPARPNGGFAANGGGAGGSGSGSGAGGGNSSGNG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038664Gar1/Naf1_Cbf5-bd_sf
IPR040309Naf1