mRNA_P-wetherbeei_contig6200.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6200.1.1
Unique NamemRNA_P-wetherbeei_contig6200.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6200.1.1 vs. uniprot
Match: D7FQ13_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ13_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 7.000e-27
Identity = 69/225 (30.67%), Postives = 99/225 (44.00%), Query Frame = 3
Query:  156 KAQQENTWILDIVSQSGDERREGVHISRREQHELEGSRGKANFIVRWPGERKQSYINVVDVKSV--MGTLRQEQSEEFVAVAAFECRGLQPVVWHPSTDFIAESIGGRGFGVVSLVAKKEGAKLYCGSSLRSFSRSCCRVTSFIFHLFYLFCSDDARLLIYLFQNR*LGVAPRG*TDGRPAAIDRKNAARPCRGRQVDLQEGDWADYDEDNSVPVSVTELQHKFE 824
            +A + N WIL + S    ERRE V +++    EL+GSRG ANF+V+W G +KQ+  N+V++K V   G ++ +QS EFV + A +CRGL+P+ WHPSTDF   S GG  +                                                                 +DG                  VDL E DW+DY E ++ P+S+ E++HKFE
Sbjct:   19 QADENNKWILTMQSPDAGERREHVEVTKARNEELDGSRGTANFVVKWQGAKKQATANIVEIKKVTTQGLIKGDQSGEFVPIFALDCRGLEPIEWHPSTDFAVTSEGGTVYA----------------------------------------------------------------SDG------------------VDLSEEDWSDYCEKSAAPISIMEIEHKFE 161          
BLAST of mRNA_P-wetherbeei_contig6200.1.1 vs. uniprot
Match: A0A7S3HIK3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIK3_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.180e-24
Identity = 68/219 (31.05%), Postives = 91/219 (41.55%), Query Frame = 3
Query:  168 ENTWILDIVSQSGDERREGVHISRREQHELEGSRGKANFIVRWPGERKQSYINVVDVKSVMGTLRQEQSEEFVAVAAFECRGLQPVVWHPSTDFIAESIGGRGFGVVSLVAKKEGAKLYCGSSLRSFSRSCCRVTSFIFHLFYLFCSDDARLLIYLFQNR*LGVAPRG*TDGRPAAIDRKNAARPCRGRQVDLQEGDWADYDEDNSVPVSVTELQHKFE 824
            +N W L I S  G + +EGV IS+ +  ELEGSRG ANFI++WPG ++Q+YI +VD+K V G   ++Q+ ++V V   ECRG+ P  W    DFIAES GG  F                                                                                      VDL +GDWA+YDE+N   VSVT ++ K E
Sbjct:   52 DNHWELTIQSADGCDTKEGVTISKGDVMELEGSRGDANFIMKWPGNKQQAYIKIVDIKGVTGNYTEDQAGKWVTVLGLECRGIVPTAWKVGRDFIAESSGGPFF------------------------------------------------------------------------------------EDVDLADGDWAEYDEENDASVSVTNVESKVE 186          
BLAST of mRNA_P-wetherbeei_contig6200.1.1 vs. uniprot
Match: A0A2D4BGF5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGF5_PYTIN)

HSP 1 Score: 103 bits (258), Expect = 1.390e-22
Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 3
Query:  156 KAQQENTWILDIVSQSGDERREGVHISRREQHELEGSRGKANFIVRWPGERKQSYINVV-DVKSVMGTLRQEQSEEFVAVAAFECRGLQPVVWHPSTDFIAESIGG 470
            +A Q + W +D+   +GDE RE V +S  E  +++GSRG+ +F+++WPG +KQS + VV DVK +   +R E S EFV    FECRGL+P+ WHP + +   S GG
Sbjct:   19 EAPQHHRWCIDVKESNGDEVREAVVVSDEELIDVDGSRGEVHFVLKWPGAKKQSQLTVVRDVKKLTRAVRGEDSGEFVPFVGFECRGLEPIAWHPGSGYTVTSAGG 124          
BLAST of mRNA_P-wetherbeei_contig6200.1.1 vs. uniprot
Match: B9PTV6_TOXGV (DUF866 domain-containing protein n=15 Tax=Toxoplasma gondii TaxID=5811 RepID=B9PTV6_TOXGV)

HSP 1 Score: 99.4 bits (246), Expect = 6.090e-21
Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 3
Query:  147 LQTKAQQEN----------TWILDIVSQSGDERREGVHISRREQHELEGSRGKANFIVRWPGERKQSYINVVDVKSVMG-TLRQEQSEEFVAVAAFECRGLQPVVWHPSTDFIAES 461
            L+ KA  EN          TW+LD+   +G+E RE V +S  E  ++  SRG ANF+VRW G ++ + +NV DVK+V   T   E S +FV++ AFECRGL+PV WHP+  +I +S
Sbjct:    6 LRMKADLENVDSIEIPAGHTWVLDVKQAAGEEVRERVTVSESETQDIPNSRGTANFVVRWDGSKQAATLNVQDVKNVTRRTYTAEDSGKFVSIVAFECRGLEPVRWHPADGYIVKS 121          
BLAST of mRNA_P-wetherbeei_contig6200.1.1 vs. uniprot
Match: A0A7S2Y364_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y364_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 6.420e-21
Identity = 54/127 (42.52%), Postives = 76/127 (59.84%), Query Frame = 3
Query:  147 LQTKAQQENT----------WILDIVSQSGDERREGVHISRREQHELEGSRGKANFIVRWPGERKQSYINVVDVKSVMGT-LRQEQSEEFVAVAAFECRGLQPVVWHPSTDFIAESIGGRGFGVVSL 494
            L+ KA  EN           W L I + +G + RE V IS  E + L GSRG A+F VRW G R  ++ ++++VK+V+   L  + S+++V VAA ECRGL+P+ W P+ +F  ES GG  FGVV L
Sbjct:    6 LRVKASLENVGQMSVVEGTQWCLKIKNPTGTDIRENVFISDTESYNLPGSRGTAHFTVRWDGARAPAHASLIEVKNVLRPCLTADDSDQWVPVAALECRGLEPIDWSPTENFSVESTGGNNFGVVDL 132          
BLAST of mRNA_P-wetherbeei_contig6200.1.1 vs. uniprot
Match: A0A0G4FS65_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FS65_VITBC)

HSP 1 Score: 94.7 bits (234), Expect = 2.830e-19
Identity = 44/105 (41.90%), Postives = 66/105 (62.86%), Query Frame = 3
Query:  165 QENTWILDIVSQSGDERREGVHISRREQHELEGSRGKANFIVRWPGERKQSYINVVDVKSVMGTLRQEQSEEFVAVAAFECRGLQPVVWHPSTDFIAESIGGRGF 479
            +E+ W LD+   SG+E RE + ++  ++ E+ GSRG  NF+VRW G + QS +NV  +K V      + S + V + AFECRG++PVVWHP   +  +S GG+ F
Sbjct:   22 REHIWCLDVKQSSGEEMRERITVNPLDEFEMAGSRGTCNFVVRWGG-KSQSSMNVQHIKGVTRDYTADDSGKEVPIVAFECRGVEPVVWHPQGGYTVKSTGGKVF 125          
BLAST of mRNA_P-wetherbeei_contig6200.1.1 vs. uniprot
Match: A0A0D2MT16_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MT16_9CHLO)

HSP 1 Score: 94.0 bits (232), Expect = 5.610e-19
Identity = 48/132 (36.36%), Postives = 82/132 (62.12%), Query Frame = 3
Query:  135 IPSF-LQTKAQQENT----------WILDIVSQSGDERREGVHISRREQHELEGSRGKANFIVRWPGERK-QSYINVVDVKSVMGTLRQEQSEEFVAVAAFECRGLQPVVWHPSTDFIAESIGGRGFGVVSL 494
            +P+F L  KA+ EN           + +D+   +G E+R+GV+++  + HEL GS+G ANF++++    K ++Y+NV+++K V   + +E + ++V V AFECRGL+PV +HP  ++ A   GG+ F  V L
Sbjct:    1 MPTFVLHVKAELENVRTLSLQKSAHYCIDVKESAGSEQRDGVYVTANDTHELSGSKGTANFVMKFDKASKHEAYLNVLEIKGVTRDITEEDNGKWVPVIAFECRGLEPVAYHPEEEWAAVGGGGQKFDQVDL 132          
BLAST of mRNA_P-wetherbeei_contig6200.1.1 vs. uniprot
Match: A0A2A9M4L8_9APIC (DUF866 domain-containing protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9M4L8_9APIC)

HSP 1 Score: 93.6 bits (231), Expect = 7.120e-19
Identity = 50/116 (43.10%), Postives = 68/116 (58.62%), Query Frame = 3
Query:  147 LQTKAQQEN----------TWILDIVSQSGDERREGVHISRREQHELEGSRGKANFIVRWPGERKQSYINVVDVKSVMG-TLRQEQSEEFVAVAAFECRGLQPVVWHPSTDFIAES 461
            L+ KA+ EN          TW+LD+   +G++ RE V +S  E  E+  SRG ANF+VRW G +  S IN+ DVK+V   T   E S +FV V AFECRG +P+ WHP+  +   S
Sbjct:    6 LRMKAELENVESIEIPADHTWVLDVKQATGEDVRERVTLSAAETLEIPNSRGTANFLVRWNGSKSVSTINIQDVKNVTRRTYTAEDSGKFVPVVAFECRGAEPIKWHPADGYTVRS 121          
BLAST of mRNA_P-wetherbeei_contig6200.1.1 vs. uniprot
Match: A0A485K9I0_9STRA (Aste57867_3374 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K9I0_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.090e-18
Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = 3
Query:  177 WILDIVSQSGDERREGVHISRREQHELEGSRGKANFIVRWPGERKQSYINVV-DVKSVMGTLRQEQSEEFVAVAAFECRGLQPVVWHPSTDFIAESIGG 470
            W LD+   +GDE+R+ V +   E+ E++GSRG A+F+++WPG +K+S + VV DVK +   +  + S E+V V  FECRG++PV W P   +   S GG
Sbjct:   26 WCLDLKEPTGDEKRDAVWVCDDEELEIDGSRGTAHFLMKWPGAKKESQLTVVRDVKKLTRPITADDSGEYVPVVGFECRGIEPVGWSPEGGYTITSAGG 124          
BLAST of mRNA_P-wetherbeei_contig6200.1.1 vs. uniprot
Match: A0A2K3DD74_CHLRE (Uncharacterized protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DD74_CHLRE)

HSP 1 Score: 92.0 bits (227), Expect = 2.720e-18
Identity = 41/107 (38.32%), Postives = 68/107 (63.55%), Query Frame = 3
Query:  177 WILDIVSQSGDERREGVHISRREQHELEGSRGKANFIVRWP-GERKQSYINVVDVKSVMGTLRQEQSEEFVAVAAFECRGLQPVVWHPSTDFIAESIGGRGFGVVSL 494
            W LD+   +G E ++GV+++  E+HEL GS+G AN ++++  G +K+S +NV+++K V      +   +FV + AFECRGL+P+ +HP  D+   S GG  +  V L
Sbjct:   26 WCLDVKESAGSEEKKGVYVTSTEEHELNGSKGTANLVMKFAKGSKKESSVNVLEIKGVTRPYTADDDGKFVPIIAFECRGLEPIAFHPEGDWHVVSSGGTKYDNVDL 132          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6200.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ13_ECTSI7.000e-2730.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3HIK3_9STRA2.180e-2431.05Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A2D4BGF5_PYTIN1.390e-2244.34Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
B9PTV6_TOXGV6.090e-2143.97DUF866 domain-containing protein n=15 Tax=Toxoplas... [more]
A0A7S2Y364_9STRA6.420e-2142.52Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G4FS65_VITBC2.830e-1941.90Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A0D2MT16_9CHLO5.610e-1936.36Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
A0A2A9M4L8_9APIC7.120e-1943.10DUF866 domain-containing protein n=1 Tax=Besnoitia... [more]
A0A485K9I0_9STRA2.090e-1842.42Aste57867_3374 protein n=1 Tax=Aphanomyces stellat... [more]
A0A2K3DD74_CHLRE2.720e-1838.32Uncharacterized protein n=4 Tax=Chlamydomonas TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6200contigP-wetherbeei_contig6200:278..2035 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQ13
Preferred nameC1orf123
PFAMsDUF866
Model size1418
Max annot lvl2759|Eukaryota
KEGG koko:K11292
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
Exons3
Evalue1.34e-08
EggNOG OGsKOG1296@1|root,KOG1296@2759|Eukaryota
DescriptionEukaryotic protein of unknown function (DUF866)
Cds size303
COG categoryJ
BRITEko00000,ko03021,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186896.4037764-UTR-P-wetherbeei_contig6200:277..10451683186896.4037764-UTR-P-wetherbeei_contig6200:277..1045Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6200 278..1045 -
1683186896.4334445-UTR-P-wetherbeei_contig6200:1573..16251683186896.4334445-UTR-P-wetherbeei_contig6200:1573..1625Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6200 1574..1625 -
1683186896.4486842-UTR-P-wetherbeei_contig6200:1740..20351683186896.4486842-UTR-P-wetherbeei_contig6200:1740..2035Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6200 1741..2035 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186896.4148123-CDS-P-wetherbeei_contig6200:1045..13451683186896.4148123-CDS-P-wetherbeei_contig6200:1045..1345Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6200 1046..1345 -
1683186896.4242866-CDS-P-wetherbeei_contig6200:1570..15731683186896.4242866-CDS-P-wetherbeei_contig6200:1570..1573Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6200 1571..1573 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6200.1.1prot_P-wetherbeei_contig6200.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6200 1046..1573 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6200.1.1

>prot_P-wetherbeei_contig6200.1.1 ID=prot_P-wetherbeei_contig6200.1.1|Name=mRNA_P-wetherbeei_contig6200.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp
MGTLRQEQSEEFVAVAAFECRGLQPVVWHPSTDFIAESIGGRGFGVVSLV
AKKEGAKLYCGSSLRSFSRSCCRVTSFIFHLFYLFCSDDARLLIYLFQNR
*
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mRNA from alignment at P-wetherbeei_contig6200:278..2035-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6200.1.1 ID=mRNA_P-wetherbeei_contig6200.1.1|Name=mRNA_P-wetherbeei_contig6200.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1758bp|location=Sequence derived from alignment at P-wetherbeei_contig6200:278..2035- (Phaeothamnion wetherbeei SAG_119_79)
TGCCTATAACCGCGACAAACGTCGGCGTCCTGGCTTACCAGCACCGGCGA CGAGCTGGAATGAATGATTCTATCCGGACACACACAAGGTGCGTTCGGTG AAGTTTTCCTGTCCACTGCGTCCGCTCCCGTGTCATACCCTCGTTTTTGC AAACAAAGGCTCAACAAGAAAACACGTGGATTTTGGACATCGTCAGCCAA AGCGGGGACGAGCGGCGAGAGGGCGTTCACATCAGCCGAAGGGAACAGCA CGAGCTGGAAGGAAGCCGAGGGAAGGCGAACTTCATCGTAAGGTGGTAAG TGAATATGACTTGATAGAATTGGTACTTATTCGGTACTTGTCACGGTTGC TAGAGTTGACGTTAGTTTAATCTCCCCCCCGCTCTCCCGCACTTCTTTCG CCATCGTAAGGCCGGGAGAACGGAAGCAGAGTTACATCAACGTCGTGGAC GTCAAGAGCGTCATGGTAAGAAAGAGGGGAGGGCATGGCGCGCGCGCACT GACTGAGCTGTTTGGATCTCATAACTCGGAGATTTCCCGTTCGAGCCTCT CATTTGAGTGCGTTTGAGTTTTGGTCTACGGGCTGGCCAGAAATCTATTC AAACCCAATCCCCGAAATAGAGCTTCTTTGCTTCGGCGCGCTCTCCCGAC TCTCCATTCCCACGATCTGGTGGACGCGGCGGGCTGGCAGGGCACGTTGA GGCAGGAGCAAAGCGAGGAGTTCGTGGCGGTGGCGGCATTTGAGTGCCGA GGGCTGCAGCCAGTGGTGTGGCACCCCAGCACTGACTTCATCGCGGAGAG CATCGGCGGGCGCGGTTTCGGAGTGGTGAGTCTAGTCGCGAAGAAGGAAG GAGCGAAGTTGTACTGTGGGAGCAGCTTACGTAGTTTTAGTCGGTCTTGC TGCAGAGTTACCTCATTTATTTTTCATTTATTTTATCTTTTTTGCAGTGA TGATGCTCGCCTCCTTATCTATCTCTTCCAAAACCGATGACTCGGCGTGG CACCGCGCGGCTAAACCGATGGGCGACCGGCCGCAATAGATAGAAAAAAT GCGGCGCGCCCATGTCGCGGCCGGCAGGTGGACCTCCAGGAAGGTGACTG GGCGGATTACGATGAGGACAACAGCGTCCCCGTCTCCGTCACAGAGCTCC AACACAAGTTCGAACCGGCCGGCTGAGCGGGAGGGAGGGAAGGATAGGCG GCGGCGGCGCCTGCGCTACCGGCGCCGGCCGCGATGGACGAGGCCGGCTT GAGCTGCTAACGCTAGGGCTTGCTGGCGCCGCTGCTCGCTACCGTCGCGC CCTGGTTGCTACTGCTGCTCGCTACCGCTGCTCCCTGGCTGCCACTGCTG CTCGCCAACCGTAGGTCATCGCGGCCGTCACCTAACGCAGCACTCTCAGC GCCGCTAAGGATTTCATGGCTAGCCGTTTTGCATGTCCAGCAAGAACAGA GGGGAGAGAAAAGACGTGGGGGTAGAGCTCTGGAACGGGCTTGTGGCTAC GCGGGGCCTGTCTAGGTCAGGCACCGGTGTCATGATGCGGGTTAACGGGC CTGAGGAAAGGCCCTTTCAATCTATTCCGTGCGTTGTTGGGCGGGAAGAT GTACTGTGAATAGGCAGAGCAGCTGGAAAGCGTACGTGCTTGTCCATGCG TTGCGTGGCGGTGGGAGCGCGGAGCGCCGCTGCCAGGATGGCGACGCTGT GTGGAGTCCCTGCACGTTTGGCGGCCGCAATATAAGATTCTTGGAGATTC TATGCGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6200:278..2035-

>mRNA_P-wetherbeei_contig6200.1.1 ID=mRNA_P-wetherbeei_contig6200.1.1|Name=mRNA_P-wetherbeei_contig6200.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig6200:278..2035- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCACGTTGAGGCAGGAGCAAAGCGAGGAGTTCGTGGCGGTGGCGGC
ATTTGAGTGCCGAGGGCTGCAGCCAGTGGTGTGGCACCCCAGCACTGACT
TCATCGCGGAGAGCATCGGCGGGCGCGGTTTCGGAGTGGTGAGTCTAGTC
GCGAAGAAGGAAGGAGCGAAGTTGTACTGTGGGAGCAGCTTACGTAGTTT
TAGTCGGTCTTGCTGCAGAGTTACCTCATTTATTTTTCATTTATTTTATC
TTTTTTGCAGTGATGATGCTCGCCTCCTTATCTATCTCTTCCAAAACCGA
TGA
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