mRNA_P-wetherbeei_contig619.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig619.6.1
Unique NamemRNA_P-wetherbeei_contig619.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig619.6.1 vs. uniprot
Match: A0A6H5L0W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W2_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.650e-30
Identity = 52/77 (67.53%), Postives = 64/77 (83.12%), Query Frame = 2
Query:  215 QPVGTLRIQEDWSGEGNGIAGLQWLGGVMLSRYLDSRKVYPENFFFGKRVVEVGAGCGLTGIYLAARGAQVALTDMD 445
            +PVG + I EDWSG+GNG+AGLQW GGV+LSRY+D R+ +PE+ F G+RV+EVGAGCGLT IY A RGA V +TDMD
Sbjct:   61 EPVGDIHITEDWSGDGNGLAGLQWPGGVVLSRYMDCRQAFPEDHFVGRRVIEVGAGCGLTSIYTALRGANVTITDMD 137          
BLAST of mRNA_P-wetherbeei_contig619.6.1 vs. uniprot
Match: D7FIW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIW1_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 2.600e-29
Identity = 52/77 (67.53%), Postives = 64/77 (83.12%), Query Frame = 2
Query:  215 QPVGTLRIQEDWSGEGNGIAGLQWLGGVMLSRYLDSRKVYPENFFFGKRVVEVGAGCGLTGIYLAARGAQVALTDMD 445
            +PVG + I EDWSG+GNG+AGLQW GGV+LSRY+D R+ +PE+ F G+RV+EVGAGCGLT IY A RGA V +TDMD
Sbjct:   66 EPVGDIHITEDWSGDGNGLAGLQWPGGVVLSRYMDCRQAFPEDHFVGRRVIEVGAGCGLTSIYTALRGADVTITDMD 142          
BLAST of mRNA_P-wetherbeei_contig619.6.1 vs. uniprot
Match: L8H975_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H975_ACACA)

HSP 1 Score: 61.6 bits (148), Expect = 1.100e-7
Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 2
Query:  266 GIAGLQWLGGVMLSRYLDSRKVYP-----ENFFFGKRVVEVGAGCGLTGIYLAARGAQVALTDM 442
            GIA   W   ++L+ Y +S + +P     EN++ GKRVVE+GAG G+ GI+LA++GA+V LTD+
Sbjct:  107 GIAHQVWHASLVLTDYFNSSEAFPPTAGGENWWAGKRVVELGAGTGIPGIFLASKGARVVLTDL 170          
BLAST of mRNA_P-wetherbeei_contig619.6.1 vs. uniprot
Match: UPI0009E49D8E (protein N-lysine methyltransferase METTL21A-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E49D8E)

HSP 1 Score: 57.8 bits (138), Expect = 1.660e-6
Identity = 29/72 (40.28%), Postives = 46/72 (63.89%), Query Frame = 2
Query:  230 LRIQEDWSGEGNGIAGLQWLGGVMLSRYLDSRKVYPENFFFGKRVVEVGAGCGLTGIYLAARGAQ-VALTDM 442
            L++Q+ ++  G  +    W G + L++  D+++V+P +     RV+E+GAGCGL GIYL   GA+ V LTDM
Sbjct:   59 LKLQQSYAALGTTV----WDGSIALAKMFDNQEVFPSSHLQTCRVLELGAGCGLVGIYLCLLGAKMVVLTDM 126          
BLAST of mRNA_P-wetherbeei_contig619.6.1 vs. uniprot
Match: A0A835YRK7_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRK7_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 2.170e-6
Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 2
Query:  284 WLGGVMLSRYL-DSRKVYPENFFFGKRVVEVGAGCGLTGIYLAARGAQVALTDMD 445
            W   V+L  YL D+ K + +    GKRV+E+GAGCGL GIY A  GA V LTD++
Sbjct:   38 WDASVILVHYLNDNSKQFNQRTMDGKRVLELGAGCGLAGIYCATLGADVTLTDLE 92          
BLAST of mRNA_P-wetherbeei_contig619.6.1 vs. uniprot
Match: A0A699ULC8_TANCI (Protein N-lysine methyltransferase METTL21A (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699ULC8_TANCI)

HSP 1 Score: 52.8 bits (125), Expect = 3.700e-6
Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 2
Query:  284 WLGGVMLSRYLDSRKVYPENFFFGKRVVEVGAGCGLTGIYLAARGAQVALTDM 442
            W  G++L ++L+      + F  GK++VE+GAGCGL G   A  G+QV LTDM
Sbjct:    2 WDSGIVLGKFLEHAVETGQLFLQGKKLVELGAGCGLVGCIAALLGSQVILTDM 54          
BLAST of mRNA_P-wetherbeei_contig619.6.1 vs. uniprot
Match: A0A7S2G4P6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2G4P6_9EUKA)

HSP 1 Score: 53.9 bits (128), Expect = 7.180e-6
Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 2
Query:  266 GIAGLQWLGGVMLSRYLDSRKVYPENFFFGKRVVEVGAGCGLTGIYLAARGAQVALTDM 442
            G   + W GG+ L+RYL+ R  Y  +   G+RV+E+G GCGL  +  AA GA V  TD+
Sbjct:   21 GTGNVLWSGGIGLARYLEHR--YGSDGLAGRRVLELGCGCGLVSLAAAALGASVTATDL 77          
BLAST of mRNA_P-wetherbeei_contig619.6.1 vs. uniprot
Match: UPI000F551F60 (protein N-lysine methyltransferase METTL21A-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F551F60)

HSP 1 Score: 54.7 bits (130), Expect = 1.120e-5
Identity = 26/74 (35.14%), Postives = 46/74 (62.16%), Query Frame = 2
Query:  221 VGTLRIQEDWSGEGNGIAGLQWLGGVMLSRYLDSRKVYPENFFFGKRVVEVGAGCGLTGIYLAARGAQVA-LTD 439
            V  +++++ ++  G  +    W G + L++  D+R ++P ++    RV+E+GAGCGL GIYL   GA++  LTD
Sbjct:   37 VSLIKLRQSYTALGTTV----WDGSIALAKMFDNRDIFPLHYLQECRVLELGAGCGLVGIYLCLLGAKMTVLTD 106          
BLAST of mRNA_P-wetherbeei_contig619.6.1 vs. uniprot
Match: D7FPY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPY2_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 1.290e-5
Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 2
Query:  194 SAHDSRPQPV---GT-LRIQEDWSGEGNGIAGLQWLGGVMLSRYLDSR-KVYPENFFFGKRVVEVGAGCGLTGIYLAARGAQVALTDM 442
            + H S   P+   GT L I +D + +  G     W   V+L RY++   ++Y      GKRV+E+GAGCGL G+Y A +GA V  TD+
Sbjct:    8 NTHHSHVVPIEVCGTQLNIAQDPTSDNLGTT--IWDASVILVRYMERNPQLYSRRRLEGKRVLELGAGCGLAGMYFALQGAHVTFTDL 93          
BLAST of mRNA_P-wetherbeei_contig619.6.1 vs. uniprot
Match: A0A833THE5_PHYIN (Lysine methyltransferase n=3 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833THE5_PHYIN)

HSP 1 Score: 55.8 bits (133), Expect = 1.370e-5
Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 2
Query:  266 GIAGLQWLGGVMLSRYLDSRKVYPENFFFGKRVVEVGAGCGLTGIYLAARGAQVALTDMD 445
            GI G  W   ++L+RYL +R+       FGKRVVE+G+G GL GI+ +  GA+V LTD++
Sbjct:  349 GIGGKLWDSCLVLTRYLAARR----EILFGKRVVELGSGLGLVGIFCSLLGARVTLTDLE 404          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig619.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5L0W2_9PHAE2.650e-3067.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIW1_ECTSI2.600e-2967.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
L8H975_ACACA1.100e-746.88Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
UPI0009E49D8E1.660e-640.28protein N-lysine methyltransferase METTL21A-like n... [more]
A0A835YRK7_9STRA2.170e-650.91Putative methyltransferase-domain-containing prote... [more]
A0A699ULC8_TANCI3.700e-645.28Protein N-lysine methyltransferase METTL21A (Fragm... [more]
A0A7S2G4P6_9EUKA7.180e-644.07Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
UPI000F551F601.120e-535.14protein N-lysine methyltransferase METTL21A-like n... [more]
D7FPY2_ECTSI1.290e-538.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A833THE5_PHYIN1.370e-546.67Lysine methyltransferase n=3 Tax=Phytophthora infe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig619contigP-wetherbeei_contig619:7254..8135 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIW1
PFAMsMethyltransf_16
Model size660
Max annot lvl2759|Eukaryota
KEGG koko:K21806
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.25e-31
EggNOG OGsKOG2793@1|root,KOG2793@2759|Eukaryota
Descriptionlysine N-methyltransferase activity
Cds size375
COG categoryS
BRITEko00000,ko01000,ko03019
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186895.2144148-UTR-P-wetherbeei_contig619:7253..74411683186895.2144148-UTR-P-wetherbeei_contig619:7253..7441Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig619 7254..7441 -
1683186895.2465959-UTR-P-wetherbeei_contig619:8038..81351683186895.2465959-UTR-P-wetherbeei_contig619:8038..8135Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig619 8039..8135 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186895.2257414-CDS-P-wetherbeei_contig619:7441..76071683186895.2257414-CDS-P-wetherbeei_contig619:7441..7607Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig619 7442..7607 -
1683186895.2366636-CDS-P-wetherbeei_contig619:7829..80381683186895.2366636-CDS-P-wetherbeei_contig619:7829..8038Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig619 7830..8038 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig619.6.1prot_P-wetherbeei_contig619.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig619 7442..8038 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig619.6.1

>prot_P-wetherbeei_contig619.6.1 ID=prot_P-wetherbeei_contig619.6.1|Name=mRNA_P-wetherbeei_contig619.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp
MTVYRFGLVDVVVPILEDVSANLPLLHVPFCCSAHDSRPQPVGTLRIQED
WSGEGNGIAGLQWLGGVMLSRYLDSRKVYPENFFFGKRVVEVGAGCGLTG
IYLAARGAQVALTDMDTGGFRYGS*
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mRNA from alignment at P-wetherbeei_contig619:7254..8135-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig619.6.1 ID=mRNA_P-wetherbeei_contig619.6.1|Name=mRNA_P-wetherbeei_contig619.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=882bp|location=Sequence derived from alignment at P-wetherbeei_contig619:7254..8135- (Phaeothamnion wetherbeei SAG_119_79)
AAGGAAGCGTGCAGCACGCAAACAAGAGCGTTTGGAGGACGAGGACGCGG GCGACGACCTCTTCTCGCTGAGATACGACTTTCCCGAAGTCAGTCAAATG ACTGTTTACCGATTCGGACTTGTGGATGTAGTTGTACCGATCCTCGAAGA CGTTTCCGCCAATCTCCCTCTCCTTCATGTTCCCTTTTGTTGTTCGGCGC ATGACTCCCGCCCACAGCCAGTTGGCACGCTGCGTATTCAAGAGGACTGG AGCGGCGAGGGCAACGGCATTGCAGGGCTTCAATGGCTTGGTGGCGTGAT GCTGAGGTGACGCGTTGTCGAGCAGAAAGGAGATTGATGGCCGGGGCTTT TTATCCCGCTCTCCTGCACATCTCTTTTAGGTGGAAAGTCAACGACGGAG ATGAAACGTTCTGTGCTATTTCTCATCCTCTTCTATTTTCTTAATCATAT CATGGTCAGATCGCCTTTTCGATTGGTAATTGTGTTGCCGCCGGCCTCCC TCGACGCACTTCTCTCACTCCACCCCAGCCGATACCTGGACAGCCGGAAA GTATACCCTGAGAATTTCTTCTTTGGAAAGCGGGTCGTGGAGGTCGGTGC AGGCTGCGGCCTGACCGGCATCTACCTGGCGGCGCGAGGGGCGCAGGTCG CCCTCACCGACATGGACACAGGTGGGTTCCGTTACGGTTCGTAAGCGAGC TTTCGACAGCAGCCTTTAGTGCTAATCCGCCGTTTCCTTGTAGGTGCTGG TCGCGGCATGACACTTCCAGTTCCTCGGGAGCCTCCTAAAGCAACTTTAA AGTCAAATGCCGCCCGAACTCTACCGTACAGTTGCTTGTCGCGGCGCGAC AAGAGAATATAATTGCTTCAAGGAATCCGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig619:7254..8135-

>mRNA_P-wetherbeei_contig619.6.1 ID=mRNA_P-wetherbeei_contig619.6.1|Name=mRNA_P-wetherbeei_contig619.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig619:7254..8135- (Phaeothamnion wetherbeei SAG_119_79)
ATGACTGTTTACCGATTCGGACTTGTGGATGTAGTTGTACCGATCCTCGA
AGACGTTTCCGCCAATCTCCCTCTCCTTCATGTTCCCTTTTGTTGTTCGG
CGCATGACTCCCGCCCACAGCCAGTTGGCACGCTGCGTATTCAAGAGGAC
TGGAGCGGCGAGGGCAACGGCATTGCAGGGCTTCAATGGCTTGGTGGCGT
GATGCTGAGCCGATACCTGGACAGCCGGAAAGTATACCCTGAGAATTTCT
TCTTTGGAAAGCGGGTCGTGGAGGTCGGTGCAGGCTGCGGCCTGACCGGC
ATCTACCTGGCGGCGCGAGGGGCGCAGGTCGCCCTCACCGACATGGACAC
AGGTGGGTTCCGTTACGGTTCGTAA
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