prot_P-wetherbeei_contig6144.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6144.1.1
Unique Nameprot_P-wetherbeei_contig6144.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length100
Homology
BLAST of mRNA_P-wetherbeei_contig6144.1.1 vs. uniprot
Match: R7Q619_CHOCR (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 80.9 bits (198), Expect = 1.900e-16
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 0
Query:    1 DCGCFPPTALVQLESGATKRMSDVCIGDRLAIGDGEFGDVYLITHSSKGGGDEHENAASLPYVSIIDESGHRIQLTPNHLLHVNGEMRPAAEVR 94
            D  CFP  ALV+LE+GATK MS V +GDR+ +G  +F DV++ TH +         A    +V++  +SGH + LT  H L+VNG +  A  VR
Sbjct:   66 DSVCFPANALVELENGATKMMSQVQLGDRVRVGPNDFSDVFMFTHKTA--------AIKYSFVTLATQSGHTLSLTKGHYLYVNGVVAAAKTVR 151          
BLAST of mRNA_P-wetherbeei_contig6144.1.1 vs. uniprot
Match: A0A2V3ISE7_9FLOR (Tiggy-winkle hedgehog protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISE7_9FLOR)

HSP 1 Score: 63.9 bits (154), Expect = 9.870e-10
Identity = 29/93 (31.18%), Postives = 52/93 (55.91%), Query Frame = 0
Query:    3 GCFPPTALVQLESGATKRMSDVCIGDRLAIGDGEFGDVYLITHSSKGGGDEHENAASLPYVSIIDESGHRIQLTPNHLLHVNGEMRPAAEVRR 95
            GCFP +A++ L SG   RM+++  G R+   + +   VYL +H         +   + P+V I+ E  H I+L+  H ++ N +++PA +V+R
Sbjct:  557 GCFPSSAVIHLSSGQDIRMANLEAGHRIMSSESKSSTVYLFSH--------RQPLGTYPFVRIVSEHNHSIELSAEHYIYANRQLKPAIDVKR 641          
BLAST of mRNA_P-wetherbeei_contig6144.1.1 vs. uniprot
Match: A0A7S2GEJ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GEJ8_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.650e-7
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0
Query:    4 CFPPTALVQLESGATKRMSDVCIGDRL----AIGDGEFGDVYLITHSSKGGGDEHENAASLPYVSIIDESGHRIQLTPNHLL 81
            CF   +LVQLESGATK M+D+ IGD +    A G   F DV  + H +        N     ++++  E G  I++TP+HLL
Sbjct:   28 CFSGDSLVQLESGATKTMADLEIGDAILSVDAAGRKSFSDVVFLPHGA--------NLKKTIFLAVTTEFGKTIKVTPSHLL 101          
BLAST of mRNA_P-wetherbeei_contig6144.1.1 vs. uniprot
Match: UPI001BD499C0 (desert hedgehog protein n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD499C0)

HSP 1 Score: 53.1 bits (126), Expect = 5.830e-6
Identity = 30/87 (34.48%), Postives = 48/87 (55.17%), Query Frame = 0
Query:    3 GCFPPTALVQLESGATKRMSDVCIGDRL----AIGDGEFGDVYLITHSSKGGGDEHENAASLPYVSIIDESGHRIQLTPNHLLHVNG 85
            GCFP  A V +  G  K +S + +GDR+      G   F  V L  H       +HE+ ++  ++S+  E+GHR+ LTP+HL+ ++G
Sbjct:  200 GCFPGWARVTVAGGGQKSLSSLSLGDRVMALSVTGQVVFSQVLLFLHQ------DHESWST--FLSLETETGHRLTLTPHHLVFLSG 278          
BLAST of mRNA_P-wetherbeei_contig6144.1.1 vs. uniprot
Match: UPI0008405B29 (sonic hedgehog protein A n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI0008405B29)

HSP 1 Score: 52.8 bits (125), Expect = 7.930e-6
Identity = 31/86 (36.05%), Postives = 48/86 (55.81%), Query Frame = 0
Query:    3 GCFPPTALVQLESGATKRMSDVCIGDRLAIGDGEFGDVY--LITHSSKGGGDEHENAASLPYVSIIDESGHRIQLTPNHLLHVNGE 86
            GCFP  +LV+ ESG TKR+  V +G+R+A  D +   VY  +I    +   +  +      +V +I ESG  + LTP HL+ + G+
Sbjct:  225 GCFPGRSLVRTESGTTKRLDQVQLGERIAALDSKGDIVYSEVIAFLDRSLTERRQ------FVQLITESGRVLTLTPAHLVPIEGK 304          
BLAST of mRNA_P-wetherbeei_contig6144.1.1 vs. uniprot
Match: UPI0014903A56 (desert hedgehog protein n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI0014903A56)

HSP 1 Score: 50.4 bits (119), Expect = 5.160e-5
Identity = 30/90 (33.33%), Postives = 46/90 (51.11%), Query Frame = 0
Query:    3 GCFPPTALVQLESGATKRMSDVCIGDRL----AIGDGEFGDVYLITHSSKGGGDEHENAASLPYVSIIDESGHRIQLTPNHLLHVNGEMR 88
            GCFP  A V +  G  K +  V  GD++     +G   F  V L  H       +HE+ ++  ++S+  E GHR+ LTP+HL+ +N   R
Sbjct:  200 GCFPGWAQVTIAGGVQKSLFSVAPGDKVMALSGMGQVVFSPVLLFLHR------DHESWST--FLSLETEDGHRLTLTPHHLVFLNSHCR 281          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6144.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
R7Q619_CHOCR1.900e-1642.55HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A2V3ISE7_9FLOR9.870e-1031.18Tiggy-winkle hedgehog protein n=1 Tax=Gracilariops... [more]
A0A7S2GEJ8_9STRA1.650e-739.02Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
UPI001BD499C05.830e-634.48desert hedgehog protein n=1 Tax=Cheilinus undulatu... [more]
UPI0008405B297.930e-636.05sonic hedgehog protein A n=1 Tax=Ceratina calcarat... [more]
UPI0014903A565.160e-533.33desert hedgehog protein n=1 Tax=Notolabrus celidot... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 4..97
e-value: 5.9E-13
score: 51.4
NoneNo IPR availableCDDcd00081Hintcoord: 4..81
e-value: 1.31207E-7
score: 44.1822
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 3..90
e-value: 1.0E-11
score: 44.7
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 4..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6144contigP-wetherbeei_contig6144:377..676 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6144.1.1mRNA_P-wetherbeei_contig6144.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6144 377..676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6144.1.1 ID=prot_P-wetherbeei_contig6144.1.1|Name=mRNA_P-wetherbeei_contig6144.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=100bp
DCGCFPPTALVQLESGATKRMSDVCIGDRLAIGDGEFGDVYLITHSSKGG
GDEHENAASLPYVSIIDESGHRIQLTPNHLLHVNGEMRPAAEVRRLAIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001767Hedgehog_Hint
IPR036844Hint_dom_sf