mRNA_P-wetherbeei_contig12686.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A835YQT7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT7_9STRA) HSP 1 Score: 348 bits (894), Expect = 1.630e-111 Identity = 171/223 (76.68%), Postives = 198/223 (88.79%), Query Frame = 1 Query: 1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669 P +V+ VL+ LN +A+Y+DTINTIPF VIVKM IWLFV+ PLAV G +FGRHWGGK SFPCRVNSI RPIP GPWYT P V+PLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVY IL+VV+VC TIVAVYFVLNAEN+ WQW++F A+GSTAGYVF+YS+YYF+F+T+MFGFLQ +FYFGYM LFC+ LFVLCGT+G+ G++VFVK IY+NIKVD Sbjct: 378 PALVITVLSFLNTVAVYYDTINTIPFMVIVKMALIWLFVAFPLAVVGCMFGRHWGGKASFPCRVNSIARPIPPGPWYTRPAAVIPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYAILSVVLVCATIVAVYFVLNAENYHWQWISFLASGSTAGYVFLYSIYYFYFKTEMFGFLQISFYFGYMGLFCVALFVLCGTIGLAGSSVFVKQIYKNIKVD 600
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A7S4DBZ3_HETAK (Transmembrane 9 superfamily member n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBZ3_HETAK) HSP 1 Score: 333 bits (855), Expect = 1.360e-107 Identity = 160/223 (71.75%), Postives = 191/223 (85.65%), Query Frame = 1 Query: 1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669 PT + ++ LN +A Y+DT NTIPFGVI+KMFAIW+FVS PLAV+GT+FGRHWGG+ FPCRVN+ PRPIP G WYT P V +PLTGILPFGSIFIEMYF+FTSFWNYKFYYVYGFMLLVY+ILAVV +CT +VA YFVLNAEN+ WQW++F A+GST+GYVF+YS+YYF F+TQM GFLQ +FYFGYM +FC LF+L GT+G GA+ FV+AIYRN+KVD Sbjct: 227 PTALALAVSALNAVAAYYDTTNTIPFGVILKMFAIWVFVSFPLAVSGTMFGRHWGGRADFPCRVNTFPRPIPLGKWYTKPWVFIPLTGILPFGSIFIEMYFVFTSFWNYKFYYVYGFMLLVYMILAVVTMCTAVVATYFVLNAENYHWQWISFTASGSTSGYVFLYSIYYFLFKTQMSGFLQISFYFGYMAIFCFGLFLLTGTIGHFGASKFVRAIYRNVKVD 449
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A7R9U3Y7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3Y7_9STRA) HSP 1 Score: 308 bits (788), Expect = 3.370e-97 Identity = 156/225 (69.33%), Postives = 186/225 (82.67%), Query Frame = 1 Query: 1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIP-AGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNY-KFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669 P V+V V++ LN+IA+ + T N + F V+ +F IW+F+S PLAV GTLFGRHWGGKN+FPCRVN+ PR +P A PWY V+P TG+LPFGSIFIEMYFIFTSFWNY KFYYVYGFMLLVYLIL VV +CTT+VAVYFVLNAENH+WQWL+F AAGSTA YVF Y+VYYF+F+T M GFLQ AFYFGYM++FCI L++LCGT+GV G+ FV+ IY NIKVD Sbjct: 250 PGVIVGVVSFLNIIAMSYSTSNVLSFTVVANLFLIWIFISFPLAVIGTLFGRHWGGKNTFPCRVNTYPRDLPEATPWYAKWYFVIPATGLLPFGSIFIEMYFIFTSFWNYNKFYYVYGFMLLVYLILMVVTICTTVVAVYFVLNAENHKWQWLSFNAAGSTAVYVFAYAVYYFYFKTSMKGFLQVAFYFGYMSVFCIGLYILCGTVGVAGSMAFVRTIYMNIKVD 474
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: W7TF26_9STRA (Transmembrane 9 superfamily member n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF26_9STRA) HSP 1 Score: 308 bits (790), Expect = 5.730e-96 Identity = 153/223 (68.61%), Postives = 182/223 (81.61%), Query Frame = 1 Query: 1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669 P +V+ V+ GLN+IA Y+DT + + I K+FAIWLFVSLPL V GTLFGRHW GK FPCR+NS+ RPIP GPWYTHP ++ +TGILPFGSIFIEMYFIFTSFWNYKFYYVY F+LLVYLIL VV +CTTIVAVYF+LN EN+ WQWL+F A+GSTAGYVF+YS+YYF +TQM G LQ AFYFGY +FC LF+LCG LGVIG ++FV+ IY +K+D Sbjct: 379 PVLVLTVVFGLNIIAEYYDTTHALHLSTIFKIFAIWLFVSLPLTVVGTLFGRHWAGKADFPCRINSMARPIPLGPWYTHPALIAAVTGILPFGSIFIEMYFIFTSFWNYKFYYVYHFLLLVYLILMVVSICTTIVAVYFLLNVENYHWQWLSFMASGSTAGYVFLYSIYYFAVKTQMTGLLQTAFYFGYTFVFCAGLFLLCGALGVIGGSLFVRRIYSGLKID 601
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A6U4JKR6_9STRA (Transmembrane 9 superfamily member n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JKR6_9STRA) HSP 1 Score: 303 bits (777), Expect = 1.320e-93 Identity = 148/219 (67.58%), Postives = 182/219 (83.11%), Query Frame = 1 Query: 1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIP-AGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYR 654 P ++V +++ LNM+A+Y+ T N + F V++K+ IW+F+S PLAV GTLFGRHWGGKN+FPCRVN+ PR +P A PW+ V+P TG+LPFGSIFIEMYFIFTSFWNYKFYYVYG ML+VYLIL VV VCTT+VAVYFVLNAENH+WQWL+F AAGSTA YVF Y+VYY++F+T M GFLQ+AFYFGY T+FC+ LF+LCGT+G GA FVK I+R Sbjct: 403 PCIIVGIVSCLNMVAMYYQTSNVLSFTVLLKLMGIWMFISFPLAVLGTLFGRHWGGKNTFPCRVNTYPRDLPEAAPWFAQWYFVIPATGLLPFGSIFIEMYFIFTSFWNYKFYYVYGLMLVVYLILTVVTVCTTVVAVYFVLNAENHKWQWLSFNAAGSTAFYVFCYAVYYYYFKTNMQGFLQWAFYFGYTTVFCVGLFILCGTVGSAGAMTFVKTIFR 621
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: D8LEX9_ECTSI (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX9_ECTSI) HSP 1 Score: 280 bits (716), Expect = 1.030e-89 Identity = 143/223 (64.13%), Postives = 173/223 (77.58%), Query Frame = 1 Query: 1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669 P+V+ V+ LN++A++++T+NTIPF ++KM IW+FVS PL VAG++FGRHWGGK +FPCRVNSIPRPIP WY P VVVPL GILPFGSIFIEMYFI TS W +YYVYGF+LLV+ IL VV+VCTTIVAVYFVLN EN+ WQW++F +A STAGYVF+YS YY +F+T GF+Q +FYFGYM LFC G+TVFVK IYRNIKVD Sbjct: 9 PSVLFPVVFLLNLVAMHYNTVNTIPFMAVLKMALIWVFVSFPLCVAGSMFGRHWGGKGNFPCRVNSIPRPIPESVWYLQPNVVVPLAGILPFGSIFIEMYFILTSLWANMYYYVYGFVLLVFAILVVVLVCTTIVAVYFVLNGENYHWQWVSFLSAASTAGYVFLYSGYYLWFKTHQSGFMQISFYFGYMGLFCAAXXXXXXXXXXXGSTVFVKQIYRNIKVD 231
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A6H5KXN7_9PHAE (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXN7_9PHAE) HSP 1 Score: 286 bits (731), Expect = 4.200e-87 Identity = 143/223 (64.13%), Postives = 176/223 (78.92%), Query Frame = 1 Query: 1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669 P+++ V+ LN++A++++T+NTIPF + KM IW+FVS PL VAG++FGRHWGGK +FPCRVNSIPRPIP WY+ P VVVPL GILPFGSIFIEMYFI S W YK+YYVYGF+LLV+ IL VV+VCT+IVAVYFVLN EN+ WQW++F +A STAGYVF+YS YY +F+T+ GF+Q +FYFGYM LFC L G+TVFVK IYRNIKVD Sbjct: 388 PSILFPVVFVLNLVAMHYNTVNTIPFMAVFKMALIWVFVSFPLCVAGSMFGRHWGGKGNFPCRVNSIPRPIPESVWYSQPNVVVPLAGILPFGSIFIEMYFILASLWAYKYYYVYGFVLLVFAILVVVLVCTSIVAVYFVLNGENYHWQWVSFLSAASTAGYVFLYSAYYLWFKTRQSGFIQISFYFGYMGLFCAALXXXXXXXXXXGSTVFVKQIYRNIKVD 610
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A5D6XY69_9STRA (Transmembrane 9 superfamily member n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY69_9STRA) HSP 1 Score: 276 bits (706), Expect = 2.160e-83 Identity = 139/223 (62.33%), Postives = 168/223 (75.34%), Query Frame = 1 Query: 1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669 PTV+ + +N +A+ + T IPF IV++ +W FVS PLAV GT+ GRH K+ FPCRVN PR IP WY P V++ LTGILPFGSIFIEMYFIF SFW+YKFYYVYGFMLLV LIL V +C TIV YF+LNAEN+RW W +FAAAGSTAGYVFVY+VY++FF+T M GFLQ FYFGYM LFC F++CGT+G +G++VF K IYRNIK + Sbjct: 389 PTVIFVAVFFINALAVAYGTTYAIPFVTIVQVVLVWFFVSCPLAVLGTILGRHGAAKSGFPCRVNKFPREIPEARWYLRPPVLILLTGILPFGSIFIEMYFIFASFWSYKFYYVYGFMLLVVLILGTVTLCVTIVCTYFLLNAENYRWHWTSFAAAGSTAGYVFVYAVYFYFFKTNMSGFLQTCFYFGYMGLFCFAFFIMCGTIGYLGSSVFTKRIYRNIKCE 611
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: H3G842_PHYRM (Transmembrane 9 superfamily member n=37 Tax=Peronosporaceae TaxID=4777 RepID=H3G842_PHYRM) HSP 1 Score: 274 bits (700), Expect = 7.490e-83 Identity = 134/223 (60.09%), Postives = 168/223 (75.34%), Query Frame = 1 Query: 1 PTVVVAVLAGLNMIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669 PTV + +N +A+++ T IPF IV++ +W FVS PLAV GT+ GRH K FPCRVN PR +P WY P V++ LTG+LPFGSIFIEMYFIF SFWNYKFYYVYGFMLLV++IL +V +C TIV YF+LNAEN+RW W +FAAAGSTA YVF+Y++Y++FF+T M GFLQ FYFGYM LFC F++CGT+G +G++VF K IYRNIK + Sbjct: 356 PTVTFVSVFFINALAVFYGTTYAIPFVTIVQVVLVWFFVSCPLAVLGTILGRHGAAKAGFPCRVNKFPREVPEARWYLRPPVLIALTGVLPFGSIFIEMYFIFASFWNYKFYYVYGFMLLVFIILTIVTLCVTIVCTYFLLNAENYRWHWTSFAAAGSTALYVFIYAIYFYFFKTNMSGFLQTCFYFGYMGLFCFAFFIMCGTVGYLGSSVFTKRIYRNIKCE 578
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Match: A0A7S3M571_9STRA (Transmembrane 9 superfamily member n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M571_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.270e-82 Identity = 125/180 (69.44%), Postives = 150/180 (83.33%), Query Frame = 1 Query: 130 AVAGTLFGRHWGGKNSFPCRVNSIPRPIPAGPWYTHPLVVVPLTGILPFGSIFIEMYFIFTSFWNYKFYYVYGFMLLVYLILAVVVVCTTIVAVYFVLNAENHRWQWLAFAAAGSTAGYVFVYSVYYFFFRTQMFGFLQFAFYFGYMTLFCIMLFVLCGTLGVIGATVFVKAIYRNIKVD 669 AV GT+FGRHW GK PCRVNSIPRPIP G WYT P V+P GILPFGSIFIEMYFIFT+FW+YKFYYVYGFMLLVY IL +V +CTT+VAVYF+LNAEN+ WQW+A +AGST+ YVF+YS++YF+++TQM G LQ ++YFGYM LFCI LF +CG LGV GA +FV IY+N+K+D Sbjct: 1 AVVGTIFGRHWMGKYEPPCRVNSIPRPIPVGAWYTSPSFVIPAAGILPFGSIFIEMYFIFTAFWSYKFYYVYGFMLLVYTILTLVTICTTVVAVYFILNAENYNWQWIALGSAGSTSFYVFLYSIFYFYYKTQMSGLLQVSYYFGYMALFCIGLFFICGALGVWGANIFVHKIYKNVKID 180 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12686.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12686.1.1 >prot_P-wetherbeei_contig12686.1.1 ID=prot_P-wetherbeei_contig12686.1.1|Name=mRNA_P-wetherbeei_contig12686.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=212bp MIALYHDTINTIPFGVIVKMFAIWLFVSLPLAVAGTLFGRHWGGKNSFPCback to top mRNA from alignment at P-wetherbeei_contig12686:119..1951- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12686.1.1 ID=mRNA_P-wetherbeei_contig12686.1.1|Name=mRNA_P-wetherbeei_contig12686.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1833bp|location=Sequence derived from alignment at P-wetherbeei_contig12686:119..1951- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12686:119..1951- >mRNA_P-wetherbeei_contig12686.1.1 ID=mRNA_P-wetherbeei_contig12686.1.1|Name=mRNA_P-wetherbeei_contig12686.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=636bp|location=Sequence derived from alignment at P-wetherbeei_contig12686:119..1951- (Phaeothamnion wetherbeei SAG_119_79)back to top |