mRNA_P-wetherbeei_contig61.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig61.7.1 vs. uniprot
Match: A0A6H5KLD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLD9_9PHAE) HSP 1 Score: 127 bits (319), Expect = 3.070e-31 Identity = 82/187 (43.85%), Postives = 116/187 (62.03%), Query Frame = 2
Query: 188 MVAIPALKFFTLTVKTAAKPMANALKAKAIQHPKMNSLLVKLGQTTHEISARIAIRAAGHSTASIKPLDEAKALARGGNILAEGVIYTIGAGLVIYEYKASNDKSAASAAKTAMEKAEETQQLQERLAAID---ARLEALEKT--------------RWGLGLGPSSKRSKNDQAPARTTAMAPSTP 697
MVAIP LK F++TVKT AKPMA ++ +A +HP+ +L +GQ T+ ISARI+IR AGH+T IKPL+E KA+A GGN+LAEG IY +G L+++EY ++ A A + ++K EE +++ + L I+ ARLEAL++T +W LGL QAP+R T + STP
Sbjct: 1 MVAIPVLKLFSMTVKTLAKPMARKIRTEAQRHPRFRGVLNSMGQATNRISARISIRLAGHTTTKIKPLEEDKAIADGGNMLAEGFIYGLGTSLMVFEYMSNAKDKEAKEAISKLKKEEEKREIAQALEDINRRLARLEALDRTGNRTHEVDDGADQRKWPLGLA--------FQAPSRKTCVGDSTP 179
BLAST of mRNA_P-wetherbeei_contig61.7.1 vs. uniprot
Match: A0A835YQK9_9STRA (Optic atrophy 3 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQK9_9STRA) HSP 1 Score: 103 bits (257), Expect = 3.320e-22 Identity = 62/153 (40.52%), Postives = 97/153 (63.40%), Query Frame = 2
Query: 188 MVAIPALKFFTLTVKTAAKPMANALKAKAIQHPKMNSLLVKLGQTTHEISARIAIRAAGHSTASIKPLDEAKALARGGNILAEGVIYTIGAGLVIYEYKASNDKSAASAAKTAMEKAEETQQLQERLAAIDARLEALEKTR------WGLGLG 628
M +PA K F+L VKT AKP+A L+ +A + + ++ +GQ++H++S I++RAAG + ++IKPLDE+KALA GG++L+E I+++ GL++++Y S K+AA A +QL+ L AI ARL+ +E WGLGLG
Sbjct: 1 MAQVPAAKVFSLVVKTIAKPLAKELRRQASANATLKRAVIWMGQSSHKVSTIISVRAAGFTASNIKPLDESKALAIGGDLLSEIFIFSVAGGLLVWDYNNSAAKAAAKAXXXXXXXXXXARQLKASLEAIHARLDEIEHKVYGSGGIWGLGLG 153
BLAST of mRNA_P-wetherbeei_contig61.7.1 vs. uniprot
Match: A0A7S4VC20_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VC20_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.540e-18 Identity = 52/137 (37.96%), Postives = 85/137 (62.04%), Query Frame = 2
Query: 194 AIPALKFFTLTVKTAAKPMANALKAKAIQHPKMNSLLVKLGQTTHEISARIAIRAAGHSTASIKPLDEAKALARGGNILAEGVIYTIGAGLVIYEYKASNDKSAASAAKTAMEKAEETQQLQERLAAIDARLEALEK 604
A+P K L +KT +KP A +K ++ ++L+ +GQTTH++++R+ I +AG+ SI PL+ KAL +G ++L E +++ I V+YEY S +K A A+ E +E+ +LQ +L A+DAR+ ALEK
Sbjct: 4 ALPITKLAGLLIKTLSKPAAKRIKHDFSRYDFTKNILIGIGQTTHQLTSRMTIWSAGYKVRSITPLEPEKALTKGADLLGESIVFLISGVTVVYEYNRSKEKEKAKEAQKLKEIEDESDRLQGKLNALDARIHALEK 140
BLAST of mRNA_P-wetherbeei_contig61.7.1 vs. uniprot
Match: A0A7S4NHT5_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NHT5_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.190e-16 Identity = 49/137 (35.77%), Postives = 81/137 (59.12%), Query Frame = 2
Query: 194 AIPALKFFTLTVKTAAKPMANALKAKAIQHPKMNSLLVKLGQTTHEISARIAIRAAGHSTASIKPLDEAKALARGGNILAEGVIYTIGAGLVIYEYKASNDKSAASAAKTAMEKAEETQQLQERLAAIDARLEALEK 604
A+P K L VKT AKP+A +K + P +LL+++GQTTH +++R+ I +AG+ SI PL++ KA+++G + L E +++ +G G+V++EY S + +LQ +L A+D RL ALE+
Sbjct: 4 ALPVTKLAGLLVKTLAKPLAKRIKHDFSRFPVTQTLLIRVGQTTHALTSRLTIWSAGYKVRSITPLEQEKAMSKGADFLGESIVFLVGGGVVVWEYNLSKEXXXXXXXXXXXXXXXXXDRLQAKLNALDKRLAALER 140
BLAST of mRNA_P-wetherbeei_contig61.7.1 vs. uniprot
Match: Q6C339_YARLI (YALI0F02871p n=4 Tax=Yarrowia TaxID=4951 RepID=Q6C339_YARLI) HSP 1 Score: 82.8 bits (203), Expect = 5.400e-15 Identity = 39/92 (42.39%), Postives = 59/92 (64.13%), Query Frame = 2
Query: 203 ALKFFTLTVKTAAKPMANALKAKAIQHPKMNSLLVKLGQTTHEISARIAIRAAGHSTASIKPLDEAKALARGGNILAEGVIYTIGAGLVIYE 478
ALK +L V+T AKPMA A+K +A QHP+ + + L Q H+ + +R G ST ++PL+EAKA+ G +AEG I+++ GL++YE
Sbjct: 5 ALKLTSLLVRTIAKPMATAIKGQAKQHPRFKQICISLAQRLHQTDTNLKMRLMGKSTFKVRPLNEAKAIESGATFVAEGFIFSVAGGLILYE 96
BLAST of mRNA_P-wetherbeei_contig61.7.1 vs. uniprot
Match: A0A7S0VKV8_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VKV8_9CRYP) HSP 1 Score: 82.0 bits (201), Expect = 1.420e-14 Identity = 52/135 (38.52%), Postives = 80/135 (59.26%), Query Frame = 2
Query: 197 IPALKFFTLTVKTAAKPMANALKAKAIQHPKMNSLLVKLGQTTHEISARIAIRAAGHSTASIKPLDEAKALARGGNILAEGVIYTIGAGLVIYEYKASNDKSAASAAKTAMEKAEETQQLQERLAAIDARLEALE 601
+P KF TL ++T +KP+ANA+K +A+ HP Q H + + ++ GH+ +IKPL EA+A+A+G +IL EGVI++I A L+ E N ++AAS A+ + Q+QE + +ARLE LE
Sbjct: 2 MPLFKFGTLFIRTLSKPVANAIKKRAVGHPSFRDRCASFAQWWHRMEVSLQVQLMGHTARTIKPLGEAEAVAQGADILGEGVIFSIAALLLAIE----NRRAAASDAR-------KKAQIQEEFSRQNARLEELE 125
BLAST of mRNA_P-wetherbeei_contig61.7.1 vs. uniprot
Match: A0A6U4UFC5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4UFC5_HEMAN) HSP 1 Score: 75.5 bits (184), Expect = 3.060e-12 Identity = 49/135 (36.30%), Postives = 79/135 (58.52%), Query Frame = 2
Query: 197 IPALKFFTLTVKTAAKPMANALKAKAIQHPKMNSLLVKLGQTTHEISARIAIRAAGHSTASIKPLDEAKALARGGNILAEGVIYTIGAGLVIYEYKASNDKSAASAAKTAMEKAEETQQLQERLAAIDARLEALE 601
+P KF TL ++T +KP+A A+K +A+ H + Q H + + ++ GH+ +IKPL EA+A+A+G +IL EGVI++I A L+ E N ++AAS A+ + Q+Q+ + +ARLE LE
Sbjct: 2 MPLFKFGTLLIRTLSKPVAAAIKRRAVGHQSFRNRCASFAQWWHRMEVSLQVQLMGHTARTIKPLGEAEAVAQGADILGEGVIFSIAAILLAVE----NRRAAASDAR-------KKAQIQDEFSRQNARLEELE 125
BLAST of mRNA_P-wetherbeei_contig61.7.1 vs. uniprot
Match: A0A0F7SGD4_PHARH (Predicted coiled-coil protein n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SGD4_PHARH) HSP 1 Score: 73.9 bits (180), Expect = 1.920e-11 Identity = 37/99 (37.37%), Postives = 62/99 (62.63%), Query Frame = 2
Query: 203 ALKFFTLTVKTAAKPMANALKAKAIQHPKMNSLLVKLGQTTHEISARIAIRAAGHSTASIKPLDEAKALARGGNILAEGVIYTIGAGLVIYE-YKASND 496
++K +L +KT +KP+AN LK +A +H + + + L Q H ++ G S ASI+PL++AKA+A G N LAEG ++ +G L++ E Y++S +
Sbjct: 3 SVKIASLFIKTVSKPIANKLKQQAAEHERFRQVCISLAQFMHSTEVKLRTNVMGESRASIRPLNDAKAVANGANSLAEGFLFLVGISLIVGEAYRSSRN 101
BLAST of mRNA_P-wetherbeei_contig61.7.1 vs. uniprot
Match: A0A5B8MMV1_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MMV1_9CHLO) HSP 1 Score: 69.3 bits (168), Expect = 1.360e-10 Identity = 39/100 (39.00%), Postives = 55/100 (55.00%), Query Frame = 2
Query: 203 ALKFFTLTVKTAAKPMANALKAKAIQHPKMNSLLVKLGQTTHEISARIAIRAAGHST---ASIKPLDEAKALARGGNILAEGVIYTIGAGLVIYEYKASN 493
A+K FT+TVKTA+KP+A + + HP + + Q H + RI A G A I PL++ +AL G +E IYT+G GL++YEY SN
Sbjct: 5 AIKVFTMTVKTASKPLAYVFQDYMLSHPVVRQRAIDWAQVLHRWNVRINRAARGQEKKKGAEISPLNDERALNLAGKFFSESFIYTVGGGLLLYEYDRSN 104
BLAST of mRNA_P-wetherbeei_contig61.7.1 vs. uniprot
Match: UPI001DE1E46E (uncharacterized protein n=1 Tax=Ogataea philodendri TaxID=1378263 RepID=UPI001DE1E46E) HSP 1 Score: 65.5 bits (158), Expect = 1.630e-8 Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 2
Query: 182 GKMVAIPALKFFTLTVKTAAKPMANALKAKAIQHPKMNSLLVKLGQTTHEISARIAIRAAGHSTASIKPLDEAKALARGGNILAEGVIYTIGAGLVIYE 478
G M +I ALK TL V+ AKP+AN +K++A H V++ Q H + R+ G I+PL+EAKA+ G IL+E I+++ AG ++YE
Sbjct: 98 GNMSSI-ALKLTTLFVRQIAKPIANTIKSEAKNHQGFKVTCVRVAQYFHFLDERLKTSLMGSKARQIRPLNEAKAIQNGAEILSETFIFSVAAGALLYE 195 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig61.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig61.7.1 >prot_P-wetherbeei_contig61.7.1 ID=prot_P-wetherbeei_contig61.7.1|Name=mRNA_P-wetherbeei_contig61.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=245bp MVAIPALKFFTLTVKTAAKPMANALKAKAIQHPKMNSLLVKLGQTTHEISback to top mRNA from alignment at P-wetherbeei_contig61:10263..11481- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig61.7.1 ID=mRNA_P-wetherbeei_contig61.7.1|Name=mRNA_P-wetherbeei_contig61.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1219bp|location=Sequence derived from alignment at P-wetherbeei_contig61:10263..11481- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig61:10263..11481- >mRNA_P-wetherbeei_contig61.7.1 ID=mRNA_P-wetherbeei_contig61.7.1|Name=mRNA_P-wetherbeei_contig61.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig61:10263..11481- (Phaeothamnion wetherbeei SAG_119_79)back to top |