mRNA_P-wetherbeei_contig600.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig600.7.1 vs. uniprot
Match: A0A812U7Y0_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U7Y0_SYMMI) HSP 1 Score: 139 bits (349), Expect = 1.430e-38 Identity = 72/128 (56.25%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 1 LHQNLGVTGPRDGTNRNILTHAFVHCTHLEVFGGRFFPRSFRNWWSDDWISAVYGEAHTFR-DHRETVVHKVGAQKLRGATTRYSVDEAAEGRLEAELKRGFVRLSTWMAVQRLPPPCAPDVCGYTPL 381
L N+GVTGP D NR I TH+FVH TH E+FG FP +F+NWWSDDWIS VYG++HTFR + H VGAQK G T RYSVDE A+ LE EL +GFV + W+A Q P P +CGY PL
Sbjct: 96 LAPNVGVTGPSDTHNRQIFTHSFVHRTHFEIFG-YLFPPAFKNWWSDDWISLVYGQSHTFRLGDSVQIQHMVGAQKTSGET-RYSVDEGAKLILERELMKGFVTIDKWLAKQSYPRLPLPVLCGYIPL 221
BLAST of mRNA_P-wetherbeei_contig600.7.1 vs. uniprot
Match: A0A7S3HK59_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK59_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.640e-38 Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 10 NLGVTGPRDGTNRNILTHAFVHCTHLEVFGGRFFPRSFRNWWSDDWISAVYGEAHTFRDHRETVVHKVGAQKLRGATTRYSVDEAAEGRLEAELKRGFVRLSTWMAVQRLPPPCAPDVCGYTPLAGEL 393
N GVTGP D N I TH+FVH TH+EVFG FP F+NWWSDDWIS VYG HTFR T+ H V AQK + TRY+VD++A+ +L+ EL++G V++ W+ +LP P +CGY PL L
Sbjct: 97 NFGVTGPSDSNNEKIFTHSFVHRTHIEVFG-HLFPPFFKNWWSDDWISTVYGVEHTFRCEDVTIKHNVNAQKT-SSLTRYNVDQSAQVQLDKELRKGHVQVDEWLKKNKLPRLSLPVICGYIPLVTYL 222
BLAST of mRNA_P-wetherbeei_contig600.7.1 vs. uniprot
Match: A0A7S2XZB2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZB2_9STRA) HSP 1 Score: 135 bits (341), Expect = 6.090e-38 Identity = 65/123 (52.85%), Postives = 79/123 (64.23%), Query Frame = 1
Query: 10 NLGVTGPRDGTNRNILTHAFVHCTHLEVFGGRFFPRSFRNWWSDDWISAVYGEAHTFRDHRETVVHKVGAQKLRGATTRYSVDEAAEGRLEAELKRGFVRLSTWMAVQRLPPPCAPDVCGYTP 378
N GVTGP D N I TH+FVH THLEVF G +FP F+NWWSDDWIS VYG HTFR V H V AQK G+ RY +D A+ LE EL++GFV +S ++ + LP P +C Y+P
Sbjct: 24 NFGVTGPTDTLNPKIFTHSFVHRTHLEVFQGAYFPEGFKNWWSDDWISTVYGRRHTFRQQDVKVTHNVKAQKT-GSWERYEIDYTAQWILEKELRQGFVTVSRYLRQKGLPGLPLPSICSYSP 145
BLAST of mRNA_P-wetherbeei_contig600.7.1 vs. uniprot
Match: A0A6V1PYQ3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PYQ3_HETAK) HSP 1 Score: 135 bits (340), Expect = 3.430e-35 Identity = 66/128 (51.56%), Postives = 83/128 (64.84%), Query Frame = 1
Query: 10 NLGVTGPRDGTNRNILTHAFVHCTHLEVFGGRFFPRSFRNWWSDDWISAVYGEAHTFRDHRETVVHKVGAQKLRGATTRYSVDEAAEGRLEAELKRGFVRLSTWMAVQRLPPPCAPDVCGYTPLAGEL 393
N GVTGP D N I THAFVH TH+E G FFP +F+NWWSDDWIS VYGE HTFR + H V AQK G RY +D +A+ LE E+++GFV L+ ++ + P PDVCG++P G+L
Sbjct: 266 NFGVTGPTDSLNPKIFTHAFVHRTHIEAIGS-FFPSTFKNWWSDDWISTVYGEKHTFRHADVQITHNVEAQKTSG-WNRYDIDYSAQYFLEKEIRQGFVTLNRFLRGRGAPGLPLPDVCGFSPAVGDL 391
BLAST of mRNA_P-wetherbeei_contig600.7.1 vs. uniprot
Match: A0A7S0SZW8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZW8_9STRA) HSP 1 Score: 134 bits (336), Expect = 3.730e-34 Identity = 66/128 (51.56%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 10 NLGVTGPRDGTNRNILTHAFVHCTHLEVFGGRFFPRSFRNWWSDDWISAVYGEAHTFRDHRETVVHKVGAQKLRGATTRYSVDEAAEGRLEAELKRGFVRLSTWMAVQRLPPPCAPDVCGYTPLAGEL 393
N GVTGP D N ILTH+FVH TH+EVFG FP F+NWWSDDWI+ VYG HTF + H V +QK G T RY VD++A+ +LE EL RG V++ W+ LP P++CGY PL L
Sbjct: 424 NFGVTGPTDTNNEKILTHSFVHRTHIEVFG-HLFPPYFKNWWSDDWITTVYGSEHTFLCPDVQIKHNVESQKQHGFT-RYDVDQSAQLKLEEELMRGHVQIDEWLKKNSLPRLPLPNICGYIPLTRHL 549
BLAST of mRNA_P-wetherbeei_contig600.7.1 vs. uniprot
Match: A0A7S2MG38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MG38_9STRA) HSP 1 Score: 122 bits (306), Expect = 8.830e-32 Identity = 62/102 (60.78%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 1 LHQNLGVTGPRDGTNRNILTHAFVHCTHLEVFGGRFFPRSFRNWWSDDWISAVYGEAHTFRDHRETVVHKVGAQKLRGATTRYSVDEAAEGRLEAELKRGFV 306
+H NLGVTGP D N ILTHAFVH THL+VFG FFP +F+NWWSDDWIS VYG HTFR V H V +QK GA RY VD +A+ L EL GFV
Sbjct: 166 IHPNLGVTGPVDTNNDRILTHAFVHRTHLDVFG-HFFPPAFKNWWSDDWISTVYGSLHTFRMPDVLVTHNVQSQKT-GAFNRYEVDSSAQYNLRRELALGFV 265
BLAST of mRNA_P-wetherbeei_contig600.7.1 vs. uniprot
Match: D8LNG2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG2_ECTSI) HSP 1 Score: 125 bits (315), Expect = 4.090e-31 Identity = 62/101 (61.39%), Postives = 72/101 (71.29%), Query Frame = 1
Query: 1 LHQNLGVTGPRDGTNRNILTHAFVHCTHLEVFGGRFFPRSFRNWWSDDWISAVYGEAHTFRDHRETVVHKVGAQKLRGATTRYSVDEAAEGRLEAELKRGF 303
L +N+GVTGP D NR ILTHAFVH TH+++FG RFFP SF+NWWSDDWIS VYG HT RDH T+ H V +QK A RY VD +AE L ELK G+
Sbjct: 497 LGRNVGVTGPADTNNRRILTHAFVHRTHIDIFG-RFFPLSFKNWWSDDWISNVYGREHTLRDHAVTITHDVRSQK-EDAPNRYDVDTSAERSLLKELKIGW 595
BLAST of mRNA_P-wetherbeei_contig600.7.1 vs. uniprot
Match: A0A7S0HFJ4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HFJ4_9EUKA) HSP 1 Score: 108 bits (270), Expect = 4.860e-28 Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = 1
Query: 1 LHQNLGVTGPRDGTNRNILTHAFVHCTHLEVFGGRFFPRSFRNWWSDDWISAVYGEAHTFRDHRETVVHKVGAQKLRGATTRYSVDEAAEGRLEAELKRGFVRLSTWM 324
++ LG TGP D N I THAFVH TH+++ G RFFPR+F NW+SDDWI++VYG + TF+ + + H+V AQK GA RY++ A+ +L AE+ +G +R+ W+
Sbjct: 12 VYPGLGATGPTDENNARIFTHAFVHRTHIDIHG-RFFPRAFLNWYSDDWITSVYGASSTFKLQQVRMRHQVEAQKTAGAE-RYAISWEAKDKLNAEVSKGALRVRRWL 117
BLAST of mRNA_P-wetherbeei_contig600.7.1 vs. uniprot
Match: A0A7S2CTF8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTF8_9STRA) HSP 1 Score: 106 bits (265), Expect = 5.890e-25 Identity = 61/127 (48.03%), Postives = 76/127 (59.84%), Query Frame = 1
Query: 13 LGVTGPRDGTNRNILTHAFVHCTHLEVFGGRFFPRSFRNWWSDDWISAVYGEAHTFRDHRETVVHKVGAQKLRGATTRYSVDEAAEGRLEAELKRGFVRLSTWMAVQRLPPPCAP--DVCGYTPLAG 387
LGVTGP D TN I TH FVH THLE+ G FFP +FRN++SDDWISAVYG + TFR + H+ QK G RY D +A L +++ G R+ W+ V+ P P VCG+ PLAG
Sbjct: 217 LGVTGPTDLTNPRIFTHVFVHRTHLEIHGS-FFPPAFRNYYSDDWISAVYGTSSTFRLPDVKMKHETKKQKT-GKIERYKPDMSARKALGKQVEDGTKRVLRWLRVRGQDPLRFPLDSVCGFVPLAG 341
BLAST of mRNA_P-wetherbeei_contig600.7.1 vs. uniprot
Match: A0A7S2SID6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SID6_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.340e-23 Identity = 54/131 (41.22%), Postives = 77/131 (58.78%), Query Frame = 1
Query: 1 LHQNLGVTGPRDGTNRNILTHAFVHCTHLEVFGGRFFPRSFRNWWSDDWISAVYGEAHTFRDHRETVVHKVGAQKLRGATTRYSVDEAAEGRLEAELKRGFVRLSTWMAVQ----RLPPPCAPDVCGYTPL 381
+H LG TGP D +N+ I TH F H TH+++ RFFP++F+N++SDDWI++VYG A TF+ + H+ AQK +GA RY D A L E+ G +R+ W+ + P VCGYTP+
Sbjct: 49 IHPFLGATGPVDASNKRIFTHVFTHRTHMDIHK-RFFPKAFKNYFSDDWITSVYGAASTFKLPTVRMTHQTKAQK-KGAIERYHPDHNARRSLGTEVHSGALRIVHWLNSTLDGGKWP---VHAVCGYTPI 174 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig600.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig600.7.1 >prot_P-wetherbeei_contig600.7.1 ID=prot_P-wetherbeei_contig600.7.1|Name=mRNA_P-wetherbeei_contig600.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=131bp LHQNLGVTGPRDGTNRNILTHAFVHCTHLEVFGGRFFPRSFRNWWSDDWIback to top mRNA from alignment at P-wetherbeei_contig600:9047..9439- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig600.7.1 ID=mRNA_P-wetherbeei_contig600.7.1|Name=mRNA_P-wetherbeei_contig600.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig600:9047..9439- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig600:9047..9439- >mRNA_P-wetherbeei_contig600.7.1 ID=mRNA_P-wetherbeei_contig600.7.1|Name=mRNA_P-wetherbeei_contig600.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig600:9047..9439- (Phaeothamnion wetherbeei SAG_119_79)back to top |