mRNA_P-wetherbeei_contig5941.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: A0A6H5KZ63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ63_9PHAE) HSP 1 Score: 134 bits (337), Expect = 3.650e-36 Identity = 65/103 (63.11%), Postives = 81/103 (78.64%), Query Frame = 1
Query: 1 ANKSAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGGPKGSFRTTDG 309
AN+ A +P GC+T+FVKNLPY+ + E AV+ A A CGR++SVRLA+WNHT KLKGFGYV+F ERGAE VR Q S+ +GGRPL+VD++ G PKGSFR DG
Sbjct: 215 ANRKAEQPAGCRTVFVKNLPYD-VEEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQSLSIGGRPLVVDFET-GAPKGSFRRQDG 315
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: D7FP47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP47_ECTSI) HSP 1 Score: 133 bits (334), Expect = 1.290e-35 Identity = 64/103 (62.14%), Postives = 81/103 (78.64%), Query Frame = 1
Query: 1 ANKSAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGGPKGSFRTTDG 309
AN+ A +P GC+T+FVKNLPY+ + E AV+ A A CGR++SVRLA+WNHT KLKGFGYV+F ERGAE VR Q ++ +GGRPL+VD++ G PKGSFR DG
Sbjct: 227 ANRKAEQPTGCRTVFVKNLPYD-VDEDAVSEALAGCGRIASVRLAMWNHTRKLKGFGYVEFSTERGAETCVRTQQNLSIGGRPLVVDFET-GAPKGSFRRQDG 327
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: A0A836CEI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI7_9STRA) HSP 1 Score: 122 bits (306), Expect = 9.610e-31 Identity = 61/100 (61.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query: 10 SAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGGPKGSFRTTDG 309
+APRP GC+T+FVKNLPY+ E+ V AF+ CG V+ VRLA+WN+T + KGFGYV F DE GA+AAV QA+I + GRP+LVDY+ VG KGSFR DG
Sbjct: 319 AAPRPKGCRTVFVKNLPYDA-DEQMVTKAFSKCGEVAIVRLAIWNNTKQRKGFGYVDFADETGAQAAVERQANIKVAGRPVLVDYE-VGRVKGSFRLADG 416
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: W7TYE4_9STRA (31 kDa chloroplastic n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYE4_9STRA) HSP 1 Score: 110 bits (274), Expect = 3.350e-27 Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 19 RPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGGPKGSFRTTDG 309
+PPGC T+FVKNLPY TE AV AF CG++ +VRLAVW HT + KGF YVQF E AE AV+ Q +I +GGR + VDY+ G PK S+R DG
Sbjct: 189 KPPGCDTVFVKNLPYN-TTEDAVREAFTFCGKIKTVRLAVWQHTQQQKGFCYVQFEKENAAEIAVKKQGAIQVGGRKVFVDYET-GAPKASYRAPDG 283
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: A0A8J2SUI0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUI0_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.010e-26 Identity = 55/99 (55.56%), Postives = 68/99 (68.69%), Query Frame = 1
Query: 16 PRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGG-PKGSFRTTDG 309
PRP GC+T+FVKNLPY+ + A+ +F G+++ VRLAV NHT + KGFGYV F E AEAAVRGQ + + GR + VDYDA GG PK SFR G
Sbjct: 182 PRPDGCRTVFVKNLPYD-IPSDALRRSFEKFGKINDVRLAVHNHTQRQKGFGYVTFVKETSAEAAVRGQGGVTVRGRAVYVDYDAPGGGPKASFRAATG 279
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: K3WSU1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU1_GLOUD) HSP 1 Score: 107 bits (266), Expect = 1.460e-25 Identity = 51/94 (54.26%), Postives = 68/94 (72.34%), Query Frame = 1
Query: 28 GCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGGPKGSFRTTDG 309
GCKT+FVK LPY+ + E+A+ A A CG + SVRL +WNHT KLKGFGYV+F E A AAV+ ++ + +GGR ++++ D G PK SFR TDG
Sbjct: 236 GCKTVFVKQLPYD-IEEQALRDALASCGTIMSVRLPIWNHTKKLKGFGYVEFSKEEEAVAAVK-RSGMKVGGRMVIINLDVAGAPKASFRQTDG 327
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: F0YMG0_AURAN (RRM domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMG0_AURAN) HSP 1 Score: 98.6 bits (244), Expect = 6.680e-25 Identity = 50/90 (55.56%), Postives = 61/90 (67.78%), Query Frame = 1
Query: 40 IFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGGPKGSFRTTDG 309
+F +NLPY+ E AV AFA G V+ VRLAVWNHT + KGFGYVQF E AEAAVRGQ ++ + GR + DYD G P+GS+R G
Sbjct: 1 VFARNLPYDA-GEDAVRRAFARYGAVADVRLAVWNHTQRRKGFGYVQFVKEAAAEAAVRGQPAVEVDGRAVACDYDDRGAPRGSYRAGAG 89
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: H3GKN1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GKN1_PHYRM) HSP 1 Score: 100 bits (250), Expect = 2.330e-23 Identity = 55/104 (52.88%), Postives = 72/104 (69.23%), Query Frame = 1
Query: 1 ANKSAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGG-PKGSFRTTDG 309
ANK A + GC+T+++K LPY+ + E+AV A APCG +SSVRL +WNHT KLKGFGYV+F E A AA R ++ + +G R +L+ DA G PK SFR DG
Sbjct: 206 ANKKAIK--GCRTVYIKQLPYD-VEEEAVREALAPCGTISSVRLPMWNHTKKLKGFGYVEFSSEDEALAASR-RSGMRIGDRMVLISLDAPGSAPKASFRQRDG 305
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: A0A225WYL6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYL6_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 5.570e-23 Identity = 53/103 (51.46%), Postives = 69/103 (66.99%), Query Frame = 1
Query: 4 NKSAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGG-PKGSFRTTDG 309
NK A + GC+T+F+K LPYE + E A+ A A CG ++SVRL +WNHT KLKGFGYV+F E A AA R ++ + +G R +L+ DA G PK SFR DG
Sbjct: 156 NKKAVK--GCRTVFIKQLPYE-VEEDAIREALASCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAAAR-RSGMKIGDRMVLISLDAAGSAPKASFRQRDG 254
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Match: A0A6A3YU63_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YU63_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.330e-22 Identity = 52/103 (50.49%), Postives = 68/103 (66.02%), Query Frame = 1
Query: 4 NKSAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTGKLKGFGYVQFFDERGAEAAVRGQASILLGGRPLLVDYDAVGG-PKGSFRTTDG 309
NK A + GC+T+F+K LPYE + E + A APCG ++SVRL +WNHT KLKGFGYV+F E A AA R ++ + +G R +L+ D G PK SFR DG
Sbjct: 216 NKKAVK--GCRTVFIKQLPYE-VEEDTIREALAPCGTITSVRLPIWNHTKKLKGFGYVEFSSEDEALAAAR-RSGMKIGDRMVLISLDVAGSAPKASFRQRDG 314 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5941.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5941.1.1 >prot_P-wetherbeei_contig5941.1.1 ID=prot_P-wetherbeei_contig5941.1.1|Name=mRNA_P-wetherbeei_contig5941.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=103bp ANKSAPRPPGCKTIFVKNLPYEGLTEKAVASAFAPCGRVSSVRLAVWNHTback to top mRNA from alignment at P-wetherbeei_contig5941:5..313+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5941.1.1 ID=mRNA_P-wetherbeei_contig5941.1.1|Name=mRNA_P-wetherbeei_contig5941.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=309bp|location=Sequence derived from alignment at P-wetherbeei_contig5941:5..313+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5941:5..313+ >mRNA_P-wetherbeei_contig5941.1.1 ID=mRNA_P-wetherbeei_contig5941.1.1|Name=mRNA_P-wetherbeei_contig5941.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=309bp|location=Sequence derived from alignment at P-wetherbeei_contig5941:5..313+ (Phaeothamnion wetherbeei SAG_119_79)back to top |