mRNA_P-wetherbeei_contig59161.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig59161.1.1
Unique NamemRNA_P-wetherbeei_contig59161.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig59161.1.1 vs. uniprot
Match: A0A7C2LVN1_9HYPH (DUF1003 domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LVN1_9HYPH)

HSP 1 Score: 255 bits (652), Expect = 8.250e-85
Identity = 131/154 (85.06%), Postives = 145/154 (94.16%), Query Frame = 1 
Query:    1 MNSEIRYLAQQLLHAGLGPLCERDRRVIARVARRVHTARDVNQVFEQNLTFGDKLADRVAVLGGSWTFILGFCAFLVAWAILNAVLLSERAFDPYPFIFLNLLLSMLAALQAPIIMMSQNRQAAKDRLAAGLDYEVNVKAESAIMELHDKIDRL 462
            MN EIRYLAQQLLHAGLGPLCERDRRVIARVARRVHTAR+VNQVFEQNL+FGD+LADRVA +GGSW FI+GFCAFL+AWA +NAV+L+  A DPYPF+FLNLLLSMLAALQAPIIMMSQNRQAAKDRLAA LDY+VN+KAES+I ELHDK+DRL
Sbjct:    1 MNPEIRYLAQQLLHAGLGPLCERDRRVIARVARRVHTARNVNQVFEQNLSFGDRLADRVAAVGGSWAFIVGFCAFLLAWAFVNAVVLAG-AVDPYPFVFLNLLLSMLAALQAPIIMMSQNRQAAKDRLAAALDYQVNIKAESSIAELHDKVDRL 153
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BLAST of mRNA_P-wetherbeei_contig59161.1.1 vs. uniprot
Match: A0A2T1HT77_9HYPH (Uncharacterized protein n=2 Tax=Alsobacter TaxID=1502180 RepID=A0A2T1HT77_9HYPH)

HSP 1 Score: 236 bits (603), Expect = 2.160e-77
Identity = 118/154 (76.62%), Postives = 138/154 (89.61%), Query Frame = 1 
Query:    1 MNSEIRYLAQQLLHAGLGPLCERDRRVIARVARRVHTARDVNQVFEQNLTFGDKLADRVAVLGGSWTFILGFCAFLVAWAILNAVLLSERAFDPYPFIFLNLLLSMLAALQAPIIMMSQNRQAAKDRLAAGLDYEVNVKAESAIMELHDKIDRL 462
            MN+EIRYLAQ LLHAG+ PLCERDRRVIARVARR+H AR+VNQVF+  LT+ +++AD+VA +GGSW+FI+G   FL AWA LNA +L+E AFDPYPF+FLNLLLSM+AALQAP+IMMSQNRQAAKDRLAA LDYEVNVKAE+AI ELHDK+DRL
Sbjct:    1 MNNEIRYLAQHLLHAGVSPLCERDRRVIARVARRMHVARNVNQVFDDRLTWSERIADKVAAIGGSWSFIIGCVVFLGAWAALNAFILAESAFDPYPFVFLNLLLSMVAALQAPVIMMSQNRQAAKDRLAAALDYEVNVKAETAISELHDKVDRL 154
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BLAST of mRNA_P-wetherbeei_contig59161.1.1 vs. uniprot
Match: A0A5P9JZA2_9HYPH (DUF1003 domain-containing protein n=1 Tax=Microvirga thermotolerans TaxID=2651334 RepID=A0A5P9JZA2_9HYPH)

HSP 1 Score: 221 bits (563), Expect = 2.400e-71
Identity = 114/154 (74.03%), Postives = 130/154 (84.42%), Query Frame = 1 
Query:    1 MNSEIRYLAQQLLHAGLGPLCERDRRVIARVARRVHTARDVNQVFEQNLTFGDKLADRVAVLGGSWTFILGFCAFLVAWAILNAVLLSERAFDPYPFIFLNLLLSMLAALQAPIIMMSQNRQAAKDRLAAGLDYEVNVKAESAIMELHDKIDRL 462
            MN+E+R+LAQ LLHAGL PL  RDRRVIARVARRVHTAR++N+ F+  LT G +LADRVA +GGSW FI+GF  FL AWA+LN VLL E AFDPYPF+FLNLLLSMLAALQAP+IMMSQNRQAAKDRLAA LDYEVN+K+E  I  L DK+D L
Sbjct:    1 MNTEVRFLAQHLLHAGLSPLDARDRRVIARVARRVHTARNLNREFDDRLTMGQRLADRVAAIGGSWGFIVGFAVFLGAWALLNVVLLKEGAFDPYPFVFLNLLLSMLAALQAPVIMMSQNRQAAKDRLAAALDYEVNLKSEMEIASLSDKMDAL 154
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BLAST of mRNA_P-wetherbeei_contig59161.1.1 vs. uniprot
Match: UPI001CCF1AE0 (DUF1003 domain-containing protein n=1 Tax=Microvirga sp. WGZ8 TaxID=2876078 RepID=UPI001CCF1AE0)

HSP 1 Score: 219 bits (558), Expect = 1.430e-70
Identity = 114/154 (74.03%), Postives = 131/154 (85.06%), Query Frame = 1 
Query:    1 MNSEIRYLAQQLLHAGLGPLCERDRRVIARVARRVHTARDVNQVFEQNLTFGDKLADRVAVLGGSWTFILGFCAFLVAWAILNAVLLSERAFDPYPFIFLNLLLSMLAALQAPIIMMSQNRQAAKDRLAAGLDYEVNVKAESAIMELHDKIDRL 462
            MN+E+R+LAQ LLHAGL PL  RDRRVIARVARRVHTAR++N+ F+  LT G +LADRVA +GGSW FI+GF  FL  WA+LN VLLSE+AFDPYPF+FLNLLLSMLAALQAP+IMMSQNRQAAKDRLAA LDYEVN+K+E  I  L DK+D L
Sbjct:    1 MNTEVRFLAQHLLHAGLTPLDARDRRVIARVARRVHTARNLNREFDDRLTMGQRLADRVAAVGGSWGFIVGFGVFLGIWALLNVVLLSEKAFDPYPFVFLNLLLSMLAALQAPVIMMSQNRQAAKDRLAAALDYEVNLKSEVQIANLGDKMDAL 154
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BLAST of mRNA_P-wetherbeei_contig59161.1.1 vs. uniprot
Match: A0A1B2EB58_9HYPH (Uncharacterized protein n=2 Tax=Microvirga ossetica TaxID=1882682 RepID=A0A1B2EB58_9HYPH)

HSP 1 Score: 214 bits (544), Expect = 2.270e-68
Identity = 108/154 (70.13%), Postives = 131/154 (85.06%), Query Frame = 1 
Query:    1 MNSEIRYLAQQLLHAGLGPLCERDRRVIARVARRVHTARDVNQVFEQNLTFGDKLADRVAVLGGSWTFILGFCAFLVAWAILNAVLLSERAFDPYPFIFLNLLLSMLAALQAPIIMMSQNRQAAKDRLAAGLDYEVNVKAESAIMELHDKIDRL 462
            MN+EIR+LAQ LLHAGL PL  R RRVIARVARRVHTA+++NQ F+  LT G +LADRVA +GGSW+FI+GF  FL  WA++N +LL+  AFDPYP+IFLNLLLSMLAA+QAPIIMMSQNR AAKDRLAA +DYE+N+K+E+ I  L+DK+DRL
Sbjct:    1 MNAEIRFLAQHLLHAGLSPLGTRGRRVIARVARRVHTAKNLNQEFDGRLTLGQRLADRVAAIGGSWSFIMGFGLFLGGWALINTILLASNAFDPYPYIFLNLLLSMLAAVQAPIIMMSQNRHAAKDRLAAAMDYEINLKSEAEIAALNDKMDRL 154
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BLAST of mRNA_P-wetherbeei_contig59161.1.1 vs. uniprot
Match: A0A0N1FEQ4_9HYPH (Membrane protein n=5 Tax=Bosea TaxID=85413 RepID=A0A0N1FEQ4_9HYPH)

HSP 1 Score: 200 bits (509), Expect = 4.190e-63
Identity = 101/154 (65.58%), Postives = 129/154 (83.77%), Query Frame = 1 
Query:    1 MNSEIRYLAQQLLHAGLGPLCERDRRVIARVARRVHTARDVNQVFEQNLTFGDKLADRVAVLGGSWTFILGFCAFLVAWAILNAVLLSERAFDPYPFIFLNLLLSMLAALQAPIIMMSQNRQAAKDRLAAGLDYEVNVKAESAIMELHDKIDRL 462
            MNS+++ LA++LL+ G G L ERD++V+ R+A+R H +RD+ Q F   LTFG++L+DRVA +GGSW+FI+GF AFLVAWAILN+V+L+  AFDPYP+IFLNLLLSM+AA+QAPIIMMSQNRQA KDRLA   DYEVN+KAE  IM LH+K+D L
Sbjct:    1 MNSDLQRLAERLLNQGSGSLPERDQKVLNRIAKRAHISRDLEQEFSATLTFGERLSDRVAEIGGSWSFIIGFGAFLVAWAILNSVILATSAFDPYPYIFLNLLLSMIAAIQAPIIMMSQNRQAEKDRLAVSHDYEVNLKAEIEIMALHEKLDAL 154
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BLAST of mRNA_P-wetherbeei_contig59161.1.1 vs. uniprot
Match: UPI001FBA2210 (DUF1003 domain-containing protein n=2 Tax=unclassified Methylobacterium TaxID=2615210 RepID=UPI001FBA2210)

HSP 1 Score: 191 bits (484), Expect = 7.270e-59
Identity = 98/155 (63.23%), Postives = 124/155 (80.00%), Query Frame = 1 
Query:    1 MNSEIRYLAQQLLHAGLGPLCERDRRVIARVARRVHTARDVNQVFEQNLTFGDKLADRVAVLGGSWTFILGFCAFLVAWAILNAVLLSER-AFDPYPFIFLNLLLSMLAALQAPIIMMSQNRQAAKDRLAAGLDYEVNVKAESAIMELHDKIDRL 462
            ++  +  LA+QL+ AGL  L ER+RRVI  +A+R H ARDVN V  +  TFG++LADRVA +GGSW FIL F   LVAW ++N V+L+   AFDPYP+IFLNL+LSM+AALQAP+I+MSQNRQAA+DRLAAGLDYE+N+KAE  IM LHDK+DR+
Sbjct:   27 VDGAVTQLARQLMEAGLEGLSERERRVILHIAKRQHVARDVNSVLVERQTFGERLADRVAQMGGSWGFILVFTGMLVAWVVVNTVVLARAGAFDPYPYIFLNLILSMVAALQAPVILMSQNRQAARDRLAAGLDYEINLKAEVEIMALHDKLDRI 181
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BLAST of mRNA_P-wetherbeei_contig59161.1.1 vs. uniprot
Match: UPI001FBBFFB0 (DUF1003 domain-containing protein n=1 Tax=Methylobacterium sp. J-078 TaxID=2836657 RepID=UPI001FBBFFB0)

HSP 1 Score: 189 bits (480), Expect = 1.730e-58
Identity = 98/155 (63.23%), Postives = 124/155 (80.00%), Query Frame = 1 
Query:    1 MNSEIRYLAQQLLHAGLGPLCERDRRVIARVARRVHTARDVNQVFEQNLTFGDKLADRVAVLGGSWTFILGFCAFLVAWAILNAVLLSERA-FDPYPFIFLNLLLSMLAALQAPIIMMSQNRQAAKDRLAAGLDYEVNVKAESAIMELHDKIDRL 462
            ++  + +LA+QL+ AGL  L ER+RRVI  VA+R H +RDVN+V  +  TFG++LADRVA LGGSW FIL F   L AW +LN V+L   A FDPYP+IFLNL+LSM+AALQAP+I+MSQNRQAA+DR+AAGLDYE+N+KAE  IM LHDK+DR+
Sbjct:   10 VDGAVTHLARQLMEAGLEGLSERERRVILHVAKRCHVSRDVNRVLVERQTFGERLADRVAQLGGSWGFILVFTGMLGAWVVLNTVILGGAAGFDPYPYIFLNLILSMVAALQAPVILMSQNRQAARDRVAAGLDYEINLKAEVEIMALHDKLDRI 164
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BLAST of mRNA_P-wetherbeei_contig59161.1.1 vs. uniprot
Match: UPI0006F8627F (DUF1003 domain-containing protein n=1 Tax=Methylobacterium sp. Leaf117 TaxID=1736260 RepID=UPI0006F8627F)

HSP 1 Score: 187 bits (476), Expect = 4.080e-58
Identity = 98/149 (65.77%), Postives = 118/149 (79.19%), Query Frame = 1 
Query:   19 YLAQQLLHAGLGPLCERDRRVIARVARRVHTARDVNQVFEQNLTFGDKLADRVAVLGGSWTFILGFCAFLVAWAILNAVLLSERA-FDPYPFIFLNLLLSMLAALQAPIIMMSQNRQAAKDRLAAGLDYEVNVKAESAIMELHDKIDRL 462
            YLA+QL  AGL  L ER+RRVI  VARR H +RDVN V  +  TFG++LADRVA LGGSW FIL F   LVAW ++N V+L     FDPYP+IFLNL+LSM+AALQAP+I+MSQNRQAA+DRLAAGLDYE+N+KAE  IM LH+K+D +
Sbjct:    3 YLARQLAEAGLEGLSERERRVILHVARRCHVSRDVNHVLVERQTFGERLADRVAQLGGSWGFILVFSGMLVAWVVVNTVILGRLGGFDPYPYIFLNLILSMVAALQAPVILMSQNRQAARDRLAAGLDYEINLKAEVEIMALHEKLDHV 151
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BLAST of mRNA_P-wetherbeei_contig59161.1.1 vs. uniprot
Match: A0A7H1N176_9PROT (DUF1003 domain-containing protein n=1 Tax=Defluviicoccus vanus TaxID=111831 RepID=A0A7H1N176_9PROT)

HSP 1 Score: 187 bits (474), Expect = 1.090e-57
Identity = 94/153 (61.44%), Postives = 122/153 (79.74%), Query Frame = 1 
Query:    1 MNSEIRYLAQQLLHAGLGPLCERDRRVIARVARRVHTARDVNQVFEQNLTFGDKLADRVAVLGGSWTFILGFCAFLVAWAILNAVLLSE-RAFDPYPFIFLNLLLSMLAALQAPIIMMSQNRQAAKDRLAAGLDYEVNVKAESAIMELHDKID 456
            MN ++ +LA++LLH GL  L ER+RRV+AR+A   H +RD+N+  +Q +T G++LAD+VA  GGSWTFIL F  F+V WA++N V+L   + FDPYPF+FLNL+LSMLAA+QAPIIMMSQNRQ+ KDRLAA  DYEVN+KAE  IM LH+K+D
Sbjct:    1 MNEQVTHLAERLLHRGLDGLAERERRVLARIAEHSHISRDINRDHDQQMTLGERLADKVAEFGGSWTFILIFAGFMVIWALINTVVLVVGKPFDPYPFVFLNLILSMLAAIQAPIIMMSQNRQSDKDRLAAAHDYEVNLKAELEIMRLHEKLD 153
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59161.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C2LVN1_9HYPH8.250e-8585.06DUF1003 domain-containing protein n=1 Tax=Hyphomic... [more]
A0A2T1HT77_9HYPH2.160e-7776.62Uncharacterized protein n=2 Tax=Alsobacter TaxID=1... [more]
A0A5P9JZA2_9HYPH2.400e-7174.03DUF1003 domain-containing protein n=1 Tax=Microvir... [more]
UPI001CCF1AE01.430e-7074.03DUF1003 domain-containing protein n=1 Tax=Microvir... [more]
A0A1B2EB58_9HYPH2.270e-6870.13Uncharacterized protein n=2 Tax=Microvirga ossetic... [more]
A0A0N1FEQ4_9HYPH4.190e-6365.58Membrane protein n=5 Tax=Bosea TaxID=85413 RepID=A... [more]
UPI001FBA22107.270e-5963.23DUF1003 domain-containing protein n=2 Tax=unclassi... [more]
UPI001FBBFFB01.730e-5863.23DUF1003 domain-containing protein n=1 Tax=Methylob... [more]
UPI0006F8627F4.080e-5865.77DUF1003 domain-containing protein n=1 Tax=Methylob... [more]
A0A7H1N176_9PROT1.090e-5761.44DUF1003 domain-containing protein n=1 Tax=Defluvii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59161contigP-wetherbeei_contig59161:11..472 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog420324.KI912066_gene6573
PFAMsDUF1003
Model size462
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal anchor
Exons1
Evalue6.29e-72
EggNOG OGsCOG4420@1|root,COG4420@2|Bacteria,1RIDY@1224|Proteobacteria,2U9GU@28211|Alphaproteobacteria,1JUIN@119045|Methylobacteriaceae
DescriptionProtein of unknown function (DUF1003)
Cds size462
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186874.7060056-CDS-P-wetherbeei_contig59161:10..4721683186874.7060056-CDS-P-wetherbeei_contig59161:10..472Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig59161 11..472 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59161.1.1prot_P-wetherbeei_contig59161.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig59161 11..472 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig59161.1.1

>prot_P-wetherbeei_contig59161.1.1 ID=prot_P-wetherbeei_contig59161.1.1|Name=mRNA_P-wetherbeei_contig59161.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp
MNSEIRYLAQQLLHAGLGPLCERDRRVIARVARRVHTARDVNQVFEQNLT
FGDKLADRVAVLGGSWTFILGFCAFLVAWAILNAVLLSERAFDPYPFIFL
NLLLSMLAALQAPIIMMSQNRQAAKDRLAAGLDYEVNVKAESAIMELHDK
IDRL
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mRNA from alignment at P-wetherbeei_contig59161:11..472-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig59161.1.1 ID=mRNA_P-wetherbeei_contig59161.1.1|Name=mRNA_P-wetherbeei_contig59161.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig59161:11..472- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACTCCGAAATCCGCTATCTCGCCCAGCAGCTGCTGCACGCAGGTCT
GGGTCCACTGTGTGAACGCGACCGGCGCGTGATTGCCCGTGTCGCCAGGC
GCGTGCACACGGCCCGCGACGTCAACCAGGTCTTCGAGCAGAACCTGACC
TTCGGCGACAAGCTGGCCGACCGGGTCGCCGTGCTCGGCGGCTCGTGGAC
CTTCATTCTCGGTTTTTGCGCCTTCCTGGTGGCGTGGGCGATCCTCAACG
CCGTGCTCTTGTCCGAGCGCGCGTTCGATCCCTACCCCTTCATTTTCCTC
AATCTTCTGCTGTCGATGCTGGCCGCCCTGCAGGCGCCGATCATCATGAT
GAGCCAGAACCGGCAGGCCGCGAAAGACCGACTAGCTGCCGGCCTCGACT
ACGAGGTCAACGTGAAGGCCGAGTCGGCCATCATGGAGCTGCACGACAAG
ATCGATCGGCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig59161:11..472-

>mRNA_P-wetherbeei_contig59161.1.1 ID=mRNA_P-wetherbeei_contig59161.1.1|Name=mRNA_P-wetherbeei_contig59161.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig59161:11..472- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACTCCGAAATCCGCTATCTCGCCCAGCAGCTGCTGCACGCAGGTCT
GGGTCCACTGTGTGAACGCGACCGGCGCGTGATTGCCCGTGTCGCCAGGC
GCGTGCACACGGCCCGCGACGTCAACCAGGTCTTCGAGCAGAACCTGACC
TTCGGCGACAAGCTGGCCGACCGGGTCGCCGTGCTCGGCGGCTCGTGGAC
CTTCATTCTCGGTTTTTGCGCCTTCCTGGTGGCGTGGGCGATCCTCAACG
CCGTGCTCTTGTCCGAGCGCGCGTTCGATCCCTACCCCTTCATTTTCCTC
AATCTTCTGCTGTCGATGCTGGCCGCCCTGCAGGCGCCGATCATCATGAT
GAGCCAGAACCGGCAGGCCGCGAAAGACCGACTAGCTGCCGGCCTCGACT
ACGAGGTCAACGTGAAGGCCGAGTCGGCCATCATGGAGCTGCACGACAAG
ATCGATCGGCTG
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