prot_P-wetherbeei_contig59127.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig59127.1.1
Unique Nameprot_P-wetherbeei_contig59127.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length77
Homology
BLAST of mRNA_P-wetherbeei_contig59127.1.1 vs. uniprot
Match: A0A401UC50_9BACT (RNA polymerase n=1 Tax=Chryseotalea sanaruensis TaxID=2482724 RepID=A0A401UC50_9BACT)

HSP 1 Score: 76.6 bits (187), Expect = 1.140e-15
Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    1 LKDELNEERSTEHLLPKLQSTLEKLSEQELYLIELRFFEELSFKEIGEILSITEVHAKVKTYRTLDKLRKF 71
            L  EL EE S EHL  +L+  L++L   EL+L+ELRFFE   FKE+  IL+I+EV+AKVKTYRTL+KL+K+
Sbjct:  110 LHSELTEEFSLEHLQVRLEELLQRLEPDELHLLELRFFESRPFKEVAAILNISEVYAKVKTYRTLEKLKKY 180          
BLAST of mRNA_P-wetherbeei_contig59127.1.1 vs. uniprot
Match: A0A1G9RIV9_9BACT (RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Catalinimonas alkaloidigena TaxID=1075417 RepID=A0A1G9RIV9_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 4.230e-14
Identity = 41/73 (56.16%), Postives = 57/73 (78.08%), Query Frame = 0
Query:    1 LKDELNEE-RSTEHLLPKLQSTLEKLSEQELYLIELRFFEELSFKEIGEILSITEVHAKVKTYRTLDKLRKFL 72
            L  EL+EE    E L+ +L  TLEKLSEQE+ LIELRF+E++SF++IG  L ITE +AKV+TYR L+K++K++
Sbjct:  101 LVSELHEEGEEKERLVERLALTLEKLSEQEVQLIELRFYEQMSFRDIGYTLRITENNAKVRTYRLLEKMKKYM 173          
BLAST of mRNA_P-wetherbeei_contig59127.1.1 vs. uniprot
Match: A0A2N5YJI3_9BACT (Sigma-70 family RNA polymerase sigma factor n=1 Tax=Marinilabiliales bacterium TaxID=2053303 RepID=A0A2N5YJI3_9BACT)

HSP 1 Score: 68.9 bits (167), Expect = 1.070e-12
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 0
Query:   10 STEHLLPKLQSTLEKLSEQELYLIELRFFEELSFKEIGEILSITEVHAKVKTYRTLDKLR 69
            S E L+  L   L+ L +QEL LIE+RFFE+ SFKEI +ILSITE +AKVKTYR LDK+R
Sbjct:  114 SNEELIEILYKVLDDLPQQELILIEMRFFEKRSFKEIADILSITESNAKVKTYRLLDKIR 173          
BLAST of mRNA_P-wetherbeei_contig59127.1.1 vs. uniprot
Match: A0A5C7Z3G3_9BACT (Sigma-70 family RNA polymerase sigma factor n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A5C7Z3G3_9BACT)

HSP 1 Score: 68.9 bits (167), Expect = 1.110e-12
Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    1 LKDELNEERSTEHLLPKLQSTLEKLSEQELYLIELRFFEELSFKEIGEILSITEVHAKVKTYRTLDKLRK 70
            L DEL   ++ +    +L   LE+L+ QEL LIELRFF+ LSFKE+ EIL ITE +AKV+TYR LDK++K
Sbjct:  115 LVDELTSNQTVDEWHARLPHILEQLTAQELQLIELRFFDLLSFKEVAEILEITESNAKVRTYRILDKMKK 184          
BLAST of mRNA_P-wetherbeei_contig59127.1.1 vs. uniprot
Match: A0A7W1SQB7_9BACT (Sigma-70 family RNA polymerase sigma factor n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7W1SQB7_9BACT)

HSP 1 Score: 68.6 bits (166), Expect = 1.370e-12
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 0
Query:   18 LQSTLEKLSEQELYLIELRFFEELSFKEIGEILSITEVHAKVKTYRTLDKLR 69
            L++ L KL E EL LIE+RFFEE+SFK IGEIL ITE +AKVKTYR +DKL+
Sbjct:  122 LENALAKLKEVELQLIEMRFFEEMSFKSIGEILEITENNAKVKTYRIIDKLK 173          
BLAST of mRNA_P-wetherbeei_contig59127.1.1 vs. uniprot
Match: A0A661XUU3_9BACT (Uncharacterized protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A661XUU3_9BACT)

HSP 1 Score: 68.6 bits (166), Expect = 2.390e-12
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 0
Query:    1 LKDELNEERSTEHLLPKLQSTLEKLSEQELYLIELRFFEELSFKEIGEILSITEVHAKVKTYRTLDKLRKFLTSG 75
            L  E  EE   EH L ++   L +L+E EL  IELRFFE+ SFKEIG +L +TEV+AKV+TYR L KL+   TS 
Sbjct:  139 LSQETIEESRYEHALEEVPKLLSQLNENELQCIELRFFEKKSFKEIGFMLGLTEVNAKVRTYRILKKLKNIATSS 213          
BLAST of mRNA_P-wetherbeei_contig59127.1.1 vs. uniprot
Match: A0A556N640_9FLAO (Sigma-70 family RNA polymerase sigma factor n=2 Tax=Fluviicola TaxID=332102 RepID=A0A556N640_9FLAO)

HSP 1 Score: 67.8 bits (164), Expect = 3.420e-12
Identity = 35/60 (58.33%), Postives = 48/60 (80.00%), Query Frame = 0
Query:   12 EHLLPKLQSTLEKLSEQELYLIELRFFEELSFKEIGEILSITEVHAKVKTYRTLDKLRKF 71
            EH    L S ++KL +++L LIE+RFFE+LSFKEIGE + ITE +AKVKT+R L+KLR++
Sbjct:  127 EHNRSLLLSAMQKLKQEQLKLIEMRFFEQLSFKEIGETIGITENNAKVKTFRALEKLREY 186          
BLAST of mRNA_P-wetherbeei_contig59127.1.1 vs. uniprot
Match: A0A3D6ES74_9BACT (RNA polymerase n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D6ES74_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 6.310e-12
Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 0
Query:    1 LKDELNEERSTEHLLPKLQSTLEKLSEQELYLIELRFFEELSFKEIGEILSITEVHAKVKTYRTLDKLRK 70
            L DEL  +++ E    +L   LE L+E EL LIELRFFE   FKEI EIL +TE +AKV+TYR LDK++K
Sbjct:  115 LVDELTSDQTIEEWHQRLPQILELLTEAELQLIELRFFEARPFKEIAEILELTENNAKVRTYRVLDKMKK 184          
BLAST of mRNA_P-wetherbeei_contig59127.1.1 vs. uniprot
Match: A0A350JK99_9FLAO (RNA polymerase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A350JK99_9FLAO)

HSP 1 Score: 67.0 bits (162), Expect = 6.420e-12
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    3 DELNEERSTEHLLPKLQSTLEKLSEQELYLIELRFFEELSFKEIGEILSITEVHAKVKTYRTLDKLRKFLT 73
            +E ++    E +L  L+S L  + E  L LIE+RFF++ SFKEIGEIL I+E +AK+KTYR LDKL+K LT
Sbjct:  117 EESDDAMELEMVLQNLESVLATIDEPLLALIEMRFFDQKSFKEIGEILGISEGNAKIKTYRALDKLKKKLT 187          
BLAST of mRNA_P-wetherbeei_contig59127.1.1 vs. uniprot
Match: A0A1F3QBQ0_9BACT (Heat-shock protein n=1 Tax=Bacteroidetes bacterium RIFCSPLOWO2_12_FULL_35_15 TaxID=1797364 RepID=A0A1F3QBQ0_9BACT)

HSP 1 Score: 66.6 bits (161), Expect = 8.570e-12
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:   23 EKLSEQELYLIELRFFEELSFKEIGEILSITEVHAKVKTYRTLDKLRKFL 72
            E L E EL LIE+RFFE+ SFKE+GEIL ITE +AKVKTYR LDKL+K +
Sbjct:  137 ENLEEDELQLIEMRFFEKRSFKEMGEILEITENNAKVKTYRILDKLKKII 186          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59127.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401UC50_9BACT1.140e-1557.75RNA polymerase n=1 Tax=Chryseotalea sanaruensis Ta... [more]
A0A1G9RIV9_9BACT4.230e-1456.16RNA polymerase sigma-70 factor, ECF subfamily n=2 ... [more]
A0A2N5YJI3_9BACT1.070e-1263.33Sigma-70 family RNA polymerase sigma factor n=1 Ta... [more]
A0A5C7Z3G3_9BACT1.110e-1255.71Sigma-70 family RNA polymerase sigma factor n=1 Ta... [more]
A0A7W1SQB7_9BACT1.370e-1269.23Sigma-70 family RNA polymerase sigma factor n=1 Ta... [more]
A0A661XUU3_9BACT2.390e-1253.33Uncharacterized protein n=1 Tax=Bacteroidetes bact... [more]
A0A556N640_9FLAO3.420e-1258.33Sigma-70 family RNA polymerase sigma factor n=2 Ta... [more]
A0A3D6ES74_9BACT6.310e-1255.71RNA polymerase n=1 Tax=Cytophagales bacterium TaxI... [more]
A0A350JK99_9FLAO6.420e-1253.52RNA polymerase n=1 Tax=Flavobacteriales bacterium ... [more]
A0A1F3QBQ0_9BACT8.570e-1270.00Heat-shock protein n=1 Tax=Bacteroidetes bacterium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007630RNA polymerase sigma-70 region 4PFAMPF04545Sigma70_r4coord: 22..70
e-value: 9.2E-12
score: 44.3
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 2..74
e-value: 5.8E-13
score: 50.2
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 11..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59127contigP-wetherbeei_contig59127:269..499 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59127.1.1mRNA_P-wetherbeei_contig59127.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig59127 180..499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig59127.1.1 ID=prot_P-wetherbeei_contig59127.1.1|Name=mRNA_P-wetherbeei_contig59127.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=77bp
LKDELNEERSTEHLLPKLQSTLEKLSEQELYLIELRFFEELSFKEIGEIL
SITEVHAKVKTYRTLDKLRKFLTSGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007630RNA_pol_sigma70_r4
IPR036388WH-like_DNA-bd_sf
IPR013324RNA_pol_sigma_r3/r4-like