mRNA_P-wetherbeei_contig58668.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58668.1.1
Unique NamemRNA_P-wetherbeei_contig58668.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58668.1.1 vs. uniprot
Match: A0A6N7GY85_9HYPH (FAD-dependent oxidoreductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GY85_9HYPH)

HSP 1 Score: 162 bits (410), Expect = 7.000e-45
Identity = 78/155 (50.32%), Postives = 111/155 (71.61%), Query Frame = 1
Query:    1 DTYPGSDQVEAVFTKIDDLAKAIDPEKPWAHPDAAALDAMTFAEWLRANVPNENVRALTGAEIASVACASPEEISILEMAYLVRACNGLDKLFSGEGGAQQDRLIGGTQPVALKVAQRLGASIKLGAPVRKIRWSDKGAVVYSDEISVAARHVIV 465
            + +PGS+ ++ ++ ++D +A  +D   PWAH D   LD++TFAEWLR NV +E  R     E+ SV  ASPEEIS+L +A+L++AC+G+ +LF   G AQ DR+IGGTQ VA +VA++L   IK+  PVR+I W+DK A+V SD+I+VAAR VIV
Sbjct:  140 EAFPGSEILKGIYRRLDAIADTVDVNAPWAHTDGKLLDSITFAEWLRQNVQHEGARQFAATEVGSVPSASPEEISVLHLAWLIKACHGIGELF---GDAQADRVIGGTQRVARRVAEKLKDEIKVNQPVRRIEWTDKSALVQSDDITVAARRVIV 291          
BLAST of mRNA_P-wetherbeei_contig58668.1.1 vs. uniprot
Match: Q31RB8_SYNE7 (Putative flavin-containing monoamine oxidase n=4 Tax=Synechococcus elongatus TaxID=32046 RepID=Q31RB8_SYNE7)

HSP 1 Score: 157 bits (396), Expect = 8.050e-43
Identity = 74/155 (47.74%), Postives = 107/155 (69.03%), Query Frame = 1
Query:    1 DTYPGSDQVEAVFTKIDDLAKAIDPEKPWAHPDAAALDAMTFAEWLRANVPNENVRALTGAEIASVACASPEEISILEMAYLVRACNGLDKLFSGEGGAQQDRLIGGTQPVALKVAQRLGASIKLGAPVRKIRWSDKGAVVYSDEISVAARHVIV 465
            ++ PGSD ++    K+  +   IDP+ PW HP AA  D +TF +WL  NVP+ N R    A + S ACASP+EIS+L++ +++RAC GL  L   EG AQQDR+IGG Q VA ++A+RLG+ I+   PVRKIRWSD+G  V++D+ ++AA+ V++
Sbjct:  140 ESVPGSDLIDEADEKLSAMVDQIDPKAPWQHPQAAIWDGLTFGQWLDQNVPDANARRFLIASV-SYACASPQEISMLQLLFIIRACGGLAMLDGFEGAAQQDRIIGGAQVVAKRLAERLGSRIQFNQPVRKIRWSDRGVTVFTDQQAIAAQSVVI 293          
BLAST of mRNA_P-wetherbeei_contig58668.1.1 vs. uniprot
Match: UPI001989FDD9 (FAD-dependent oxidoreductase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=UPI001989FDD9)

HSP 1 Score: 146 bits (369), Expect = 9.240e-39
Identity = 75/152 (49.34%), Postives = 102/152 (67.11%), Query Frame = 1
Query:   10 PGSDQVEAVFTKIDDLAKAIDPEKPWAHPDAAALDAMTFAEWLRANVPNENVRALTGAEIASVACASPEEISILEMAYLVRACNGLDKLFSGEGGAQQDRLIGGTQPVALKVAQRLGAS-IKLGAPVRKIRWSDKGAVVYSDEISVAARHVI 462
            PG  +VEA+  K+  +A A+DP  PWAHP A A D +T A WL  NV  +N+R     ++ S ACASPE+IS+L    LV+ C   DKL   +  AQQDR++GGTQPVA+ +A+ LGA+ I+L +PVR++RW+D  A V +D + V ARHVI
Sbjct:  167 PGYARVEAIKAKLQTMADALDPAAPWAHPQARAWDGITMAGWLAQNVKEQNIREFMVGDL-SYACASPEQISVLSFLSLVKQCVSFDKLNGFDDAAQQDRVVGGTQPVAIGMAELLGANNIRLKSPVRRVRWTDTEATVSTDTVDVKARHVI 317          
BLAST of mRNA_P-wetherbeei_contig58668.1.1 vs. uniprot
Match: A0A352QZ09_9ACTN (Oxidoreductase n=1 Tax=Dietzia sp. TaxID=1871616 RepID=A0A352QZ09_9ACTN)

HSP 1 Score: 114 bits (286), Expect = 4.020e-27
Identity = 61/142 (42.96%), Postives = 83/142 (58.45%), Query Frame = 1
Query:   40 TKIDDLAKAIDPEKPWAHPDAAALDAMTFAEWLRANVPNENVRALTGAEIASVACASPEEISILEMAYLVRACNGLDKLFSGEGGAQQDRLIGGTQPVALKVAQRLGASIKLGAPVRKIRWSDKGAVVYSDEISVAARHVIV 465
            +++D +A AI P++PW   DA  LD+ TF  WLR        RA   +   +V  A PE++S L   + + A  GLD L    GGAQQDR++GG Q +AL VA+ LG  + L +PV  I WSD GA V S    V+ARHV++
Sbjct:  119 SRLDRMAAAIPPDEPWRAADAERLDSQTFETWLRRAARTRRGRAYFRSVTEAVFAAGPEDLSALWAGFYIGAAGGLDALIDTAGGAQQDRVVGGAQAIALAVARELGERVVLDSPVIGIEWSDAGAHVRSHRGVVSARHVVI 260          
BLAST of mRNA_P-wetherbeei_contig58668.1.1 vs. uniprot
Match: A0A7V8WC85_9ACTN (FAD-dependent oxidoreductase (Fragment) n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7V8WC85_9ACTN)

HSP 1 Score: 110 bits (276), Expect = 3.610e-26
Identity = 63/142 (44.37%), Postives = 84/142 (59.15%), Query Frame = 1
Query:   43 KIDDLAKAIDPEKPWAHPDAAALDAMTFAEWLRANVPNENVRALTGAEIASVACASPEEISILEMAYLVRACNGLDKLFSGEGGAQQDRLIGGTQPVALKVAQRLGASIKLGAPVRKIRWSDKGAVVYSDE-ISVAARHVIV 465
            KID LA+ I PE PW    AA LDA+TF  W+R N+     R L    + +V  A PE++S+L + +  R+  G D L   EGGAQQDR +GG+Q VA +VA  L   + LGAPVR++  S +   V +D   SV+AR  IV
Sbjct:  127 KIDRLARRIPPEAPWQARGAARLDAVTFWSWMRRNLYTRGGRELIRLAVEAVWAAEPEDLSLLHVLFYTRSGGGFDMLLDTEGGAQQDRFVGGSQVVAERVAAELSGPVVLGAPVRRLSQSGESVRVEADGGASVSARRAIV 268          
BLAST of mRNA_P-wetherbeei_contig58668.1.1 vs. uniprot
Match: UPI00029A1225 (flavin monoamine oxidase family protein n=1 Tax=Dietzia alimentaria TaxID=665550 RepID=UPI00029A1225)

HSP 1 Score: 109 bits (272), Expect = 3.610e-25
Identity = 58/141 (41.13%), Postives = 81/141 (57.45%), Query Frame = 1
Query:   43 KIDDLAKAIDPEKPWAHPDAAALDAMTFAEWLRANVPNENVRALTGAEIASVACASPEEISILEMAYLVRACNGLDKLFSGEGGAQQDRLIGGTQPVALKVAQRLGASIKLGAPVRKIRWSDKGAVVYSDEISVAARHVIV 465
            ++D +A  I P +PW   +A  LDA TF  WLR     +  RA       +V  A PE++S L   + + +  GLD L    GGAQQDR+ GG Q +AL++A++LG  + LG PV  I W D GA V +D+  V ARHV++
Sbjct:  120 RLDRMAGDIPPAEPWVAAEADRLDAQTFDTWLRRTGLTKRGRAFFRLVTEAVFSAGPEDVSALWAGFYLSSAGGLDPLIDVAGGAQQDRVAGGAQVIALELARKLGDRVLLGTPVTAIDWDDSGARVRTDDQGVRARHVVI 260          
BLAST of mRNA_P-wetherbeei_contig58668.1.1 vs. uniprot
Match: A0A537ZHN5_9ACTN (Flavin monoamine oxidase family protein n=2 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537ZHN5_9ACTN)

HSP 1 Score: 108 bits (270), Expect = 7.200e-25
Identity = 57/147 (38.78%), Postives = 84/147 (57.14%), Query Frame = 1
Query:   25 VEAVFTKIDDLAKAIDPEKPWAHPDAAALDAMTFAEWLRANVPNENVRALTGAEIASVACASPEEISILEMAYLVRACNGLDKLFSGEGGAQQDRLIGGTQPVALKVAQRLGASIKLGAPVRKIRWSDKGAVVYSDEISVAARHVIV 465
            V+    K+D LA+ +  + PW  P A  LD+ T   W+R NV     RAL      +V  A P EIS+L + + + +    + L   EGGAQQDR +GG+Q V+L++A+ LG +++L APVR+I  S  G +V +D   + AR  IV
Sbjct:  113 VQQAMLKLDRLARRVPLDAPWEAPRAEHLDSQTLWSWMRRNVYTRGGRALLELATEAVWAAEPAEISLLHILFYIHSAGRFEVLLETEGGAQQDRFVGGSQLVSLRMAEELGDAVELSAPVRRIEHSSDGVLVVADGDEIRARRAIV 259          
BLAST of mRNA_P-wetherbeei_contig58668.1.1 vs. uniprot
Match: UPI001E62BF30 (FAD-dependent oxidoreductase n=1 Tax=Conexibacter sp. W3-3-2 TaxID=2675227 RepID=UPI001E62BF30)

HSP 1 Score: 105 bits (261), Expect = 1.600e-24
Identity = 55/148 (37.16%), Postives = 83/148 (56.08%), Query Frame = 1
Query:   22 QVEAVFTKIDDLAKAIDPEKPWAHPDAAALDAMTFAEWLRANVPNENVRALTGAEIASVACASPEEISILEMAYLVRACNGLDKLFSGEGGAQQDRLIGGTQPVALKVAQRLGASIKLGAPVRKIRWSDKGAVVYSDEISVAARHVIV 465
            +V     +++ +A+ +    PW  P AAA    T A WLR NV     RA        + CA P+EIS+L+    VR+  GL+ +   EGGAQQDR++GG+Q +A++ A+ +   ++LGAPVR +  S    +V +D +   AR VIV
Sbjct:  115 EVAVAQLRLERMARRVPAATPWEAPRAAAXXGTTLASWLRRNVRTRLGRAFFTHACEGLFCAQPQEISLLQFLAAVRSSGGLEAMLGTEGGAQQDRVVGGSQLLAIRAAETIADRVRLGAPVRAVAVSGDRVLVRADGVEARARRVIV 262          
BLAST of mRNA_P-wetherbeei_contig58668.1.1 vs. uniprot
Match: A0A7W0A7C3_9ACTN (Flavin monoamine oxidase family protein n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7W0A7C3_9ACTN)

HSP 1 Score: 107 bits (267), Expect = 1.750e-24
Identity = 55/141 (39.01%), Postives = 82/141 (58.16%), Query Frame = 1
Query:   43 KIDDLAKAIDPEKPWAHPDAAALDAMTFAEWLRANVPNENVRALTGAEIASVACASPEEISILEMAYLVRACNGLDKLFSGEGGAQQDRLIGGTQPVALKVAQRLGASIKLGAPVRKIRWSDKGAVVYSDEISVAARHVIV 465
            K+D +A  +  E PW  P A   D+ TF  W+RAN+      +L    + SV  A PE++S+L + + + +  G D L   EGGAQQDR++GG+Q V++ +A+RLG  + LGAPVR+I     G  V ++     AR V+V
Sbjct:  114 KLDAMADEVPLEAPWKAPKALEWDSQTFWSWMRANLFTRGGWSLVQLAVESVFAAEPEDLSLLHVLFYIHSAGGFDALVDTEGGAQQDRVVGGSQLVSIAIAKRLGGRVVLGAPVRRIAQEADGVRVVAEGAIATARRVLV 254          
BLAST of mRNA_P-wetherbeei_contig58668.1.1 vs. uniprot
Match: A0A346N2Z7_9GAMM (FAD-dependent oxidoreductase n=1 Tax=Solimonas sp. K1W22B-7 TaxID=2303331 RepID=A0A346N2Z7_9GAMM)

HSP 1 Score: 107 bits (267), Expect = 2.560e-24
Identity = 57/154 (37.01%), Postives = 89/154 (57.79%), Query Frame = 1
Query:    7 YPGSDQVEAVFTKIDDLAKAIDPEKPWAHPDAAALDAMTFAEWLRANVPNENVRALTGAEIASVACASPEEISILEMAYLVRACNGLDKLFSGEGGAQQDRLIGGTQPVALKVAQRLGAS-IKLGAPVRKIRWSDKGAVVYSDEISVAARHVIV 465
            + G+ + +   T+++ +A  +  +KPW    A   D+ TF  W+ AN+ ++N +AL    I SV  A P ++S+L + + + +   L+ L S EGGAQ  R++GG+Q +AL +AQ LG+S I L APV +I   DKG  +  D   V A  VIV
Sbjct:  159 FLGALEAQLAITRLNGMAADVPLDKPWTAASAVEWDSQTFQSWIDANLYSDNGKALLQLAIESVFSAQPRDLSLLGVLFYIHSAGSLENLISTEGGAQDSRIVGGSQRIALSMAQALGSSRILLNAPVLRIEHDDKGVTLRGDGFQVKAARVIV 312          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58668.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6N7GY85_9HYPH7.000e-4550.32FAD-dependent oxidoreductase n=1 Tax=Hyphomicrobia... [more]
Q31RB8_SYNE78.050e-4347.74Putative flavin-containing monoamine oxidase n=4 T... [more]
UPI001989FDD99.240e-3949.34FAD-dependent oxidoreductase n=1 Tax=Phycisphaerae... [more]
A0A352QZ09_9ACTN4.020e-2742.96Oxidoreductase n=1 Tax=Dietzia sp. TaxID=1871616 R... [more]
A0A7V8WC85_9ACTN3.610e-2644.37FAD-dependent oxidoreductase (Fragment) n=1 Tax=Th... [more]
UPI00029A12253.610e-2541.13flavin monoamine oxidase family protein n=1 Tax=Di... [more]
A0A537ZHN5_9ACTN7.200e-2538.78Flavin monoamine oxidase family protein n=2 Tax=Ac... [more]
UPI001E62BF301.600e-2437.16FAD-dependent oxidoreductase n=1 Tax=Conexibacter ... [more]
A0A7W0A7C3_9ACTN1.750e-2439.01Flavin monoamine oxidase family protein n=1 Tax=Th... [more]
A0A346N2Z7_9GAMM2.560e-2437.01FAD-dependent oxidoreductase n=1 Tax=Solimonas sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58668contigP-wetherbeei_contig58668:35..499 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1140.Synpcc7942_0369
PFAMsAmino_oxidase
Model size465
Max annot lvl1117|Cyanobacteria
KEGG rclassRC00062,RC00160,RC00225,RC00676,RC00807,RC00808,RC01808,RC02226,RC02713
KEGG koko:K00274
KEGG ReactionR02173,R02382,R02529,R02532,R02613,R02908,R02919,R04025,R04300,R04674,R04890,R04893,R04894,R04907,R04908,R08346,R08347,R08348,R11354
KEGG Pathwayko00260,ko00330,ko00340,ko00350,ko00360,ko00380,ko00950,ko00982,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00260,map00330,map00340,map00350,map00360,map00380,map00950,map00982,map01100,map01110,map04726,map04728,map05030,map05031,map05034
KEGG ModuleM00135
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.32e-43
EggNOG OGsCOG1231@1|root,COG1231@2|Bacteria,1G18A@1117|Cyanobacteria,1H03U@1129|Synechococcus
EC1.4.3.4
DescriptionMonoamine oxidase
Cds size465
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186868.0168126-CDS-P-wetherbeei_contig58668:34..4991683186868.0168126-CDS-P-wetherbeei_contig58668:34..499Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58668 35..499 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58668.1.1prot_P-wetherbeei_contig58668.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58668 35..499 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58668.1.1

>prot_P-wetherbeei_contig58668.1.1 ID=prot_P-wetherbeei_contig58668.1.1|Name=mRNA_P-wetherbeei_contig58668.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp
DTYPGSDQVEAVFTKIDDLAKAIDPEKPWAHPDAAALDAMTFAEWLRANV
PNENVRALTGAEIASVACASPEEISILEMAYLVRACNGLDKLFSGEGGAQ
QDRLIGGTQPVALKVAQRLGASIKLGAPVRKIRWSDKGAVVYSDEISVAA
RHVIV
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mRNA from alignment at P-wetherbeei_contig58668:35..499+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58668.1.1 ID=mRNA_P-wetherbeei_contig58668.1.1|Name=mRNA_P-wetherbeei_contig58668.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig58668:35..499+ (Phaeothamnion wetherbeei SAG_119_79)
GACACCTATCCCGGCTCCGATCAGGTCGAGGCGGTGTTCACCAAGATCGA CGACCTCGCCAAGGCGATCGATCCGGAAAAGCCGTGGGCGCATCCGGACG CTGCCGCACTCGACGCCATGACCTTCGCCGAATGGCTGCGCGCCAATGTG CCGAACGAGAATGTGCGCGCGCTGACCGGCGCCGAAATCGCCTCGGTCGC CTGCGCCAGCCCGGAGGAAATCTCGATCCTGGAAATGGCCTATCTGGTGC GCGCCTGCAACGGCCTCGACAAGTTGTTCTCCGGCGAGGGCGGCGCGCAG CAGGACCGCCTGATCGGCGGCACCCAGCCGGTCGCGCTGAAAGTGGCACA GCGCCTGGGCGCTTCGATCAAGCTTGGCGCGCCGGTGCGCAAGATCAGAT GGTCGGATAAAGGCGCGGTGGTCTACAGCGACGAGATCAGCGTCGCCGCG CGCCATGTCATTGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58668:35..499+

>mRNA_P-wetherbeei_contig58668.1.1 ID=mRNA_P-wetherbeei_contig58668.1.1|Name=mRNA_P-wetherbeei_contig58668.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig58668:35..499+ (Phaeothamnion wetherbeei SAG_119_79)
GACACCTATCCCGGCTCCGATCAGGTCGAGGCGGTGTTCACCAAGATCGA
CGACCTCGCCAAGGCGATCGATCCGGAAAAGCCGTGGGCGCATCCGGACG
CTGCCGCACTCGACGCCATGACCTTCGCCGAATGGCTGCGCGCCAATGTG
CCGAACGAGAATGTGCGCGCGCTGACCGGCGCCGAAATCGCCTCGGTCGC
CTGCGCCAGCCCGGAGGAAATCTCGATCCTGGAAATGGCCTATCTGGTGC
GCGCCTGCAACGGCCTCGACAAGTTGTTCTCCGGCGAGGGCGGCGCGCAG
CAGGACCGCCTGATCGGCGGCACCCAGCCGGTCGCGCTGAAAGTGGCACA
GCGCCTGGGCGCTTCGATCAAGCTTGGCGCGCCGGTGCGCAAGATCAGAT
GGTCGGATAAAGGCGCGGTGGTCTACAGCGACGAGATCAGCGTCGCCGCG
CGCCATGTCATTGTC
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