prot_P-wetherbeei_contig58563.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig58563.1.1
Unique Nameprot_P-wetherbeei_contig58563.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length90
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig58563.1.1 vs. uniprot
Match: UPI001B8A7D4E (TetR/AcrR family transcriptional regulator n=1 Tax=Bradyrhizobium diazoefficiens TaxID=1355477 RepID=UPI001B8A7D4E)

HSP 1 Score: 175 bits (444), Expect = 6.160e-54
Identity = 88/89 (98.88%), Postives = 88/89 (98.88%), Query Frame = 0 
Query:    1 MRTLTNKRRLEAMLDFLAPLVPELSKRDRHSMASGIVSVSSVLSWMFMRDNCGYDGKRAGEAAAYAVQLIIEGGQQRCSALRAQRPGGA 89
            MRTLTNKRRLEAMLDFLAPLVPELSKRDRHSMASGIVSVSSVLSWMFMRDNCGYDGKRAGEAAAYAVQLIIEGGQQRCSALRAQRP GA
Sbjct:  124 MRTLTNKRRLEAMLDFLAPLVPELSKRDRHSMASGIVSVSSVLSWMFMRDNCGYDGKRAGEAAAYAVQLIIEGGQQRCSALRAQRPSGA 212
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58563.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001B8A7D4E6.160e-5498.88TetR/AcrR family transcriptional regulator n=1 Tax... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58563contigP-wetherbeei_contig58563:33..302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58563.1.1mRNA_P-wetherbeei_contig58563.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig58563 3..302 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig58563.1.1 ID=prot_P-wetherbeei_contig58563.1.1|Name=mRNA_P-wetherbeei_contig58563.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=90bp
MRTLTNKRRLEAMLDFLAPLVPELSKRDRHSMASGIVSVSSVLSWMFMRD
NCGYDGKRAGEAAAYAVQLIIEGGQQRCSALRAQRPGGA*
back to top