mRNA_P-wetherbeei_contig58473.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58473.1.1 vs. uniprot
Match: A0A7C4XTS4_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XTS4_9HYPH) HSP 1 Score: 136 bits (342), Expect = 3.370e-38 Identity = 73/132 (55.30%), Postives = 95/132 (71.97%), Query Frame = 1
Query: 1 EAKSAGLFVGTVLLALCAVQLVRIIAAVATGRGTLGFGELIADTRHNRQRLGLALLVALFIATIGWTGTTLGLFLLLVCSMLVMGVREPGKLIGVAFTTSAVVYLLLIYLLNTRLPHGVVEKAVASALGQGS 396
EA+ F+G +L +L A+Q R+ A + TGR +L GEL+A+T HNRQRL L LVA+FIATI W GTTLGL LLL+ ML++GVR+ L+ V+ TT+A VY+LLIYLL +RLP G VE +A ALG G+
Sbjct: 44 EARVTATFIGVILFSLSAIQFARLFARLVTGRASLSLGELVANTLHNRQRLALVSLVAVFIATIEWVGTTLGLVLLLMGCMLILGVRKITTLLAVSLTTAAAVYVLLIYLLESRLPKGPVEALIAHALGLGA 175
BLAST of mRNA_P-wetherbeei_contig58473.1.1 vs. uniprot
Match: UPI00062BBE65 (tripartite tricarboxylate transporter TctB family protein n=1 Tax=Microvirga massiliensis TaxID=1033741 RepID=UPI00062BBE65) HSP 1 Score: 115 bits (288), Expect = 4.540e-30 Identity = 60/129 (46.51%), Postives = 89/129 (68.99%), Query Frame = 1
Query: 1 EAKSAGLFVGTVLLALCAVQLVRIIAAVATGRGTLGFGELIADTRHNRQRLGLALLVALFIATIGWTGTTLGLFLLLVCSMLVMGVREPGKLIGVAFTTSAVVYLLLIYLLNTRLPHGVVEKAVASALG 387
EA++ G +G LL L +Q+++++ +GR TLGFG L + QRL + L++ +F+A I W GTTLGLFL+++ SM V+GVRE LIG+AF +A VY+L I LL++RLP G+VE+ ++S LG
Sbjct: 44 EARATGTLIGVCLLVLTFLQILKVVVQARSGRATLGFGSLFERSTVQSQRLAILLILIVFVAVIPWLGTTLGLFLVMMASMWVLGVREWRTLIGIAFAVAATVYILFIALLDSRLPTGLVERLLSSLLG 172
BLAST of mRNA_P-wetherbeei_contig58473.1.1 vs. uniprot
Match: UPI001300F259 (hypothetical protein n=1 Tax=Skermanella pratensis TaxID=2233999 RepID=UPI001300F259) HSP 1 Score: 108 bits (269), Expect = 3.610e-27 Identity = 63/131 (48.09%), Postives = 86/131 (65.65%), Query Frame = 1
Query: 1 EAKSAGLFVGTVLLALCAVQLVRIIAAVATGRGTLGFGELIADTRHNRQRLGLALLVALFIATIGWTGTTLGLFLLLVCSMLVMGVREPGKLIGVAFTTSAVVYLLLIYLLNTRLPHGVVEKAVASALGQG 393
EA++ G +G VLLAL AVQ+VRI+ + G G+LGFG+L T QRL L ++ LFI TI W GTTLGLFL+++ +M ++G+R+P L+ VA +A V+L+ I LL R P G VE+ V LG G
Sbjct: 44 EARANGTVIGVVLLALIAVQVVRIVLNLRNGTGSLGFGDLGRWTPAQGQRLALIGVLILFIVTIPWLGTTLGLFLVMLAAMWILGLRQPVTLLAVAGGVAASVFLVFIVLLGARFPPGPVERVVVPLLGGG 174
BLAST of mRNA_P-wetherbeei_contig58473.1.1 vs. uniprot
Match: UPI00155396A7 (hypothetical protein n=1 Tax=Devosia sp. 919 TaxID=2726065 RepID=UPI00155396A7) HSP 1 Score: 107 bits (266), Expect = 5.970e-27 Identity = 57/128 (44.53%), Postives = 87/128 (67.97%), Query Frame = 1
Query: 1 EAKSAGLFVGTVLLALCAVQLVRIIAAVATGRGTLGFGELIADTRHNRQRLGLALLVALFIATIGWTGTTLGLFLLLVCSMLVMGVREPGKLIGVAFTTSAVVYLLLIYLLNTRLPHGVVEKAVASAL 384
EA+S G +G+VLL CA+Q++ + GR + GFG+L ++++NR+RL L L V +F A + +TGTTLGL L+L ML+MGVR +L G++ T++ V++LLI+L +RLP G +E A+ S L
Sbjct: 27 EARSTGWLIGSVLLLFCALQVLLTLRQAVAGRISFGFGDLFENSQNNRRRLALLLAVTVFTALLPFTGTTLGLALVLCAGMLIMGVRNIWQLAGISLATASFVFILLIWLAGSRLPQGALEHALLSIL 154
BLAST of mRNA_P-wetherbeei_contig58473.1.1 vs. uniprot
Match: A0A512DNG8_9PROT (Uncharacterized protein n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DNG8_9PROT) HSP 1 Score: 103 bits (258), Expect = 1.640e-25 Identity = 56/131 (42.75%), Postives = 79/131 (60.31%), Query Frame = 1
Query: 1 EAKSAGLFVGTVLLALCAVQLVRIIAAVATGRGTLGFGELIADTRHNRQRLGLALLVALFIATIGWTGTTLGLFLLLVCSMLVMGVREPGKLIGVAFTTSAVVYLLLIYLLNTRLPHGVVEKAVASALGQG 393
EA++ G VG LL L A+Q+ R++ + G G+LGFG+ T QRL L + +F+ TI W GTTLGLF +++ +M ++GVR P L+GVA SA VY++ I LL R P G +E +A G G
Sbjct: 44 EARANGTVVGVTLLVLIAIQVARVVVQLRNGTGSLGFGDFAQWTPAQGQRLMLIAALIVFVMTIPWLGTTLGLFAVMLAAMWILGVRSPATLLGVAVGVSATVYIVFIVLLGARFPAGPIENGLAPLFGGG 174
BLAST of mRNA_P-wetherbeei_contig58473.1.1 vs. uniprot
Match: UPI0019A4F6CA (Tripartite tricarboxylate transporter TctB family protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019A4F6CA) HSP 1 Score: 101 bits (252), Expect = 9.070e-25 Identity = 56/126 (44.44%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 1 EAKSAGLFVGTVLLALCAVQLVRIIAAVATGRGTLGFGELIADTRHNRQRLGLALLVALFIATIGWTGTTLGLFLLLVCSMLVMGVREPGKLIGVAFTTSAVVYLLLIYLLNTRLPHGVVEKAVAS 378
EAK+ G+ +GT L+ L AVQLVRI +A GRG L L A +R+G+ ++ FIATI W G TLGLF+ + S+ ++GVR+P ++ ++F +A YLL I LN+ PHG VE A+A+
Sbjct: 33 EAKANGVIIGTALVLLIAVQLVRIAVEIAKGRGDLSTEPLWAPREVLMKRVGMVAVLIAFIATIKWLGLTLGLFIGMAVSLWILGVRKPARVAAISFVVAASAYLLFILALNSSFPHGPVEHAIAA 158
BLAST of mRNA_P-wetherbeei_contig58473.1.1 vs. uniprot
Match: A0A6N7GL05_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GL05_9HYPH) HSP 1 Score: 101 bits (252), Expect = 1.490e-24 Identity = 58/129 (44.96%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 1 EAKSAGLFVGTVLLALCAVQLVRIIAAVATGRGTLGFGELIADTRHNRQRLGLALLVALFIATIGWTGTTLGLFLLLVCSMLVMGVREPGKLIGVAFTTSAVVYLLLIYLLNTRLPHGVVEKAVASALG 387
EA++ G +G LL L A+Q+VRIIA G GT+ FGE T +++RL + L++ +F+ATI W GTTLGL + M V+GVR+ L+GV+F T+A VYLL I L T+LP G +E + G
Sbjct: 52 EARANGTVIGLTLLTLIAIQVVRIIALWREGAGTMSFGEFGRMTAGHQKRLTVLLILVVFVATIPWLGTTLGLLFSMFALMWVLGVRDIKTLVGVSFVTAAAVYLLFIAFLKTQLPAGPIEHLLQPLFG 180
BLAST of mRNA_P-wetherbeei_contig58473.1.1 vs. uniprot
Match: W9H726_9PROT (Uncharacterized protein n=2 Tax=Skermanella TaxID=204447 RepID=W9H726_9PROT) HSP 1 Score: 100 bits (248), Expect = 3.450e-24 Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = 1
Query: 1 EAKSAGLFVGTVLLALCAVQLVRIIAAVATGRGTLGFGELIADTRHNRQRLGLALLVALFIATIGWTGTTLGLFLLLVCSMLVMGVREPGKLIGVAFTTSAVVYLLLIYLLNTRLPHGVVEKAVASALGQG 393
EA++ G VG LL L A+Q+ R++ + G+LGFG+L T QRL L + +F+ TI W GTTLGLF +++ +M ++GVR P L+GVA S VYLL I L R P G +E +A G G
Sbjct: 28 EARANGTVVGVTLLTLIAIQVARVVIQLRRSTGSLGFGDLGRWTPAQAQRLMLIATLIVFVITIPWLGTTLGLFAVMLAAMWILGVRAPSTLLGVALGVSTTVYLLFIVTLGARFPAGPIENGLAPLFGGG 158 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58473.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58473.1.1 >prot_P-wetherbeei_contig58473.1.1 ID=prot_P-wetherbeei_contig58473.1.1|Name=mRNA_P-wetherbeei_contig58473.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp EAKSAGLFVGTVLLALCAVQLVRIIAAVATGRGTLGFGELIADTRHNRQRback to top mRNA from alignment at P-wetherbeei_contig58473:100..498- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58473.1.1 ID=mRNA_P-wetherbeei_contig58473.1.1|Name=mRNA_P-wetherbeei_contig58473.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig58473:100..498- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58473:100..498- >mRNA_P-wetherbeei_contig58473.1.1 ID=mRNA_P-wetherbeei_contig58473.1.1|Name=mRNA_P-wetherbeei_contig58473.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig58473:100..498- (Phaeothamnion wetherbeei SAG_119_79)back to top |