mRNA_P-wetherbeei_contig583.3.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig583.3.3
Unique NamemRNA_P-wetherbeei_contig583.3.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig583.3.3 vs. uniprot
Match: A0A7S2WFU9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFU9_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.300e-70
Identity = 274/522 (52.49%), Postives = 331/522 (63.41%), Query Frame = 3
Query:  168 AAIAQAKAAGNINIHDTAHTQVLALSAESRAEQEKHAELLRRLEAERRARQLIVPTKAEDVRAALRKLGQPVRLFGEKVGDVRERLKAYLARLEVDGEEAHKV--DFLATAKPPAAAAXXXXXXXXXARATGEEGATIKTEAVYTTASEALVAARREIAAFSFPRTEKRLAGVKRRRDSLPYRQAGDTAAAELYAAMRGLVVDLSAIGDERPLSALRVAPDGTAAATGSWTSFVHVWDASSLERRCLLIG---HTERVTGVAWHPNAYGAASVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAAADRTARLWDCRTKKCVHVLRGHADRLARVDFHPSGCFVGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGCVYCLPAHTALISDVRYGPQ-TGEVLATCGFDGAVKVWSTRDFGLLKALAGHEGKVTACDFSPDERRVLT 1715
            AA+  A  AGNINI +    +VL LSA S  EQ++HA LLRR+EAERRAR ++VPT  E+VR  LR +GQPVRLFGE + D+RERL+ ++AR ++DG+EA  +  + +   KP A                       K   VY+ AS  LV AR+ I  +S   T +R+AGVKRRR+S   R   D +A E Y  MR L +  S   DERPL A R AP     A+ S   ++ +WD  SLE + +L G   HTER TG+AWHP A+G+    P                                 AS++AD TA+LWD R    V    GH +R++ VDFHPSG ++GTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R C Y +PAH  L+S++R+     GE L +  FDG ++VW TRD+  L  L+GHEGKV   DF    + V T
Sbjct:   18 AALQAAVRAGNINIAEGGKMEVLELSATSLDEQDRHAVLLRRVEAERRARSIVVPTNPEEVRQQLRSIGQPVRLFGENLADIRERLREFIARRQLDGDEAPGMLTEPMEEDKPKAPE---------------------KKADVYSEASADLVEARQRIFDYSSTHTVERMAGVKRRRESAEERARVDESAKETYKDMRALAISASQFADERPLGACRCAPHADVVASASLAPYIKLWDTESLESKGILGGPGAHTERATGLAWHPQAFGSMDAAP-------------------------------LLASSSADTTAKLWDVRGLAPVQTFTGHQNRVSNVDFHPSGEYIGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRACAYTVPAHMGLVSELRFLQHGLGEALLSTSFDGTIRVWGTRDWRKLADLSGHEGKVMGGDFERGGKAVFT 487          
BLAST of mRNA_P-wetherbeei_contig583.3.3 vs. uniprot
Match: A0A835YL38_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL38_9STRA)

HSP 1 Score: 246 bits (629), Expect = 3.260e-70
Identity = 158/352 (44.89%), Postives = 207/352 (58.81%), Query Frame = 3
Query:  159 LGEAAIAQAKAAGNINIHDTAHTQVLALSAESRAEQEKHAELLRRLEAERRARQLIVPTKAEDVRAALRKLGQPVRLFGEKVGDVRERLKAYLARLEVDGE-EAHKVDFLATAKPPAAAAXXXXXXXXXARATGEEGATIKTEAVYTTASEALVAARREIAAFSFPRTEKRLAGVKRRRDSLPYRQAGDTAAAELYAAMRGLVVDLSAIGDERPLSALRVAPDGTAAATGSWTSFVHVWDASSLERRCLLIGHTERVTGVAWHPNAYGAASVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAAADRTARLWDCRTKKCVHVLRGHADRLARVDFHPSGCFVGTA 1211
            LG +A+ +A+A+GNINIHD A T+V+ LSA SR EQ+KHAE+LR++EA RRAR + VPT  E+V  ALR+LGQP+RLF E + DVRERL+ +LA+L++DGE +A     LA A+P  AAA           A  EEG   K E VYT A+  L+ AR  IA++SF    +RLA  KRRR       A D AAA     ++GLV+++SA+GDERPLSA+RV+PDG+  A+ +W+    +W+   L    +  GH ER+TGVAWHP A   A                                      +AAAD+          KC+  L GHADRLARV+FHP G +VGTA
Sbjct:   27 LGASAVEKARASGNINIHDIAQTEVMELSAASREEQDKHAEMLRKVEAHRRARTMAVPTLPEEVARALRRLGQPIRLFSETLADVRERLREHLAQLQLDGEGDAAVASLLAAAEPAKAAA-----------AAVEEG---KAEVVYTVAAAPLIEAREVIASYSFAAAPQRLARAKRRRLDSAVASAEDAAAAAACTRLKGLVINVSAVGDERPLSAVRVSPDGSLVASAAWSGVAKLWNMKDLRPCGVFRGHKERLTGVAWHPRALTEAG--------------------------------PALLVTAAADKVGACV-VHAGKCLQTLTGHADRLARVEFHPCGRYVGTA 331          
BLAST of mRNA_P-wetherbeei_contig583.3.3 vs. uniprot
Match: D8LGI0_ECTSI (SFM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI0_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 3.680e-62
Identity = 204/550 (37.09%), Postives = 262/550 (47.64%), Query Frame = 3
Query:  162 GEAAIAQAKAAGNINIHDTAHTQVLALSAESRAEQEKHAELLRRLEAERRARQLIVPTKAEDVRAALRKLGQPVRLFGEKVGDVRERLKAYLARLEVDGEEAHKVDFLATAKP---PAAAAXXXXXXXXXARATGEEGATIKTEAVYTTASEALVAARREIAAFSFPRTEKRLAGVKRRRDSLPYRQAGDTAAAELYAAMRGLVVDLSAIGDERPLSALRVAPDGTAAATGSWTSFVHVWDASSLERRCLLIGHTERVTGVAWHPNAYGAASVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAAADRTARLWDCRTKKCVHVLRGHADRLARVDFHPSGCFVGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGCVYCLPA----------HTA-------------------LISDVRYGPQTGEVLATCGFDGAVKVWSTRDFGLLKALAGHEGKVTACDFSPDERRVLT 1715
            G  AI  A  AGNINIH   HT+++ LS ES+  Q++HA LL+++EA+RRAR ++VPTK EDV   LR+LGQPVRLF E V D+RERL+ ++A  E++ EEA K++ +   KP   P             A       A  K E VYT AS+AL+ AR  IA  SF R + RLAG KRRR +     A D  A E ++ M+ L ++ S   D+RPLSA++V+PDG   A+GSWT  V +WD  +LE R +L GH+ERVTGV WHP AY +      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    + R                    + L +  F  +   +                                                                                                   R  C+   P           HT                    L++D+RY   +GEVL +  FD   KVWSTRD+ LL+ L+GHEGKVT CD SPDER+++T
Sbjct:   51 GSDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEADRRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAAXXXXXPPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEETSAVDRRAVETFSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPEAYSSDKTLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRYLGTASXXXXXXXXXXXXXEELLLQFIFSWNLRPLSGNDTTISFCVSPPSVFSSYFLVLAFGFYNELISCSPFVFALCLVLHDPLDRTATTRKCTGFLSQADGALVATGDLGGVGRVWDLRSGKSVWTMEGHVKRITCMDFSPCAYEVASGSDDHTVXXXXXXXXXXXXXXXXXSTLVADIRYSRTSGEVLVSASFDSTAKVWSTRDWSLLRTLSGHEGKVTGCDVSPDERKIVT 600          
BLAST of mRNA_P-wetherbeei_contig583.3.3 vs. uniprot
Match: A0A2P4X876_9STRA (U4/U6 small nuclear ribonucleoprotein Prp4 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X876_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.480e-47
Identity = 150/403 (37.22%), Postives = 197/403 (48.88%), Query Frame = 3
Query:   51 KRIFFGSIDA-----LSLKRESAEGTGAPAAALDEELEEVALGEAAIAQAKAAGNINIHDTAHTQVLALSAESRAEQEKHAELLRRLEAERRARQLIVPTKAEDVRAALRKLGQPVRLFGEKVGDVRERLKAYLARLEVDGEEA---HKVDFLATAKPPAAAAXXXXXXXXXARATGEEGATIKTEAVYTTA-SEALVAARREIAAFSFPRTEKRLAGVKRRRDSLPYRQAG--DTAAAELYAAMRGLVVDLSAIGDERPLSALRVAPDGTAAATGSWTSFVHVWDASSLERRCLLIGHTERVTGVAWHPNAY------GAASVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAAADRTARLWDCRTKKCVHVLRGHADRLARVDFHPSGCFVGT 1208
            K I+FG+IDA     +     ++  +G  A+ L          EAAI     AGN+N+ D   T+VL LS  SRA QEKHA+LLRR+EAE+RAR + VPT  E+V   LR+LG+P+ LFGE+  D RERL+  L+RLE++ EE    H+V      +     A          R  G      + +  Y    +E L +AR  I A +      RL   ++ R      +A   D  AAELYA    +    S  GD RPL+++R + DG   ATGSW+S V VWDASS     +  GH +RVTGVAWHPN        GA SV                                    S +AD TARLW     + + VL+GH  RL +V FHP G +VGT
Sbjct:    5 KGIYFGAIDASAGDMVPSNVRNSSSSGRMASNL----------EAAIR----AGNVNVSDNVETEVLELSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHQVLADIQKQEVGTGAGESGAATREERRAGRYTKPQEDQLFYVPIKNEKLKSARAAIFAHTTTVVGARLKRERQERQMSAEERARTVDQHAAELYATALKMANIASQNGDVRPLASVRFSADGNHVATGSWSSLVKVWDASSANEVKVFRGHEDRVTGVAWHPNNVFSEMTDGADSV---------------------------------CLCSGSADGTARLWSAARNEPLAVLQGHKARLGKVAFHPLGNYVGT 360          
BLAST of mRNA_P-wetherbeei_contig583.3.3 vs. uniprot
Match: A0A8K1CIV4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIV4_PYTOL)

HSP 1 Score: 181 bits (458), Expect = 4.640e-46
Identity = 139/389 (35.73%), Postives = 188/389 (48.33%), Query Frame = 3
Query:   51 KRIFFGSIDALSLKRESAEGTGAPAAALDEELEEVALGEAAIAQAKAAGNINIHDTAHTQVLALSAESRAEQEKHAELLRRLEAERRARQLIVPTKAEDVRAALRKLGQPVRLFGEKVGDVRERLKAYLARLEVDGEEAHKVD-FLATAKPPAAAAXXXXXXXXXARATGEEGATIKTEAVYTTASEALVAARREIAAFSFPRTEKRLAGVKRRRDSLPYRQAG-DTAAAELYAAMRGLVVDLSAIGDERPLSALRVAPDGTAAATGSWTSFVHVWDASSLERRCLLIGHTERVTGVAWHP-NAYGAASVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAAADRTARLWDCRTKKCVHVLRGHADRLARVDFHPSGCFVGT 1208
            K I+FG+I+  S    +A G G   +++  E        + +  A  AGN+N  DT   +VL LS  S A QEKHA+LLRR+EAE+RAR + VPT  E+V   LR+L QP+ LFGE   D RERL+  LAR+E++ EE   VD  L   +    AA         A A G++             +  L  AR  I  ++  RT+KRL   +  +   P      D  AA LYA  + +V   S  GD RPL+ +R APD    ATGSW+  V VWDA+S     +  GH +R+TG+ WHP  ++   S                                     S +AD TA+LW     +    L+GH  RL +V FHPSG +VGT
Sbjct:    5 KGIYFGAINGASGTEPAASGDGLIPSSVRRETARAPGSNSLLEAAIRAGNVNTADTGEKEVLQLSESSLAAQEKHAQLLRRIEAEKRARNISVPTSVEEVILRLRQLHQPITLFGEGPADRRERLRELLARIELEAEEGGFVDHLLGQLRQQQQAAEGASSGAEEASALGKDQKVEDQLFYIPVRNNELKTARANIFTYAAERTQKRLKQERLEKTYGPNDMMRIDQQAASLYATAQKMVNVASQNGDVRPLANVRYAPDAKHVATGSWSGLVKVWDANSANEVKVFRGHEDRITGLDWHPATSFSDMS----------------------------DASDVVCLCSGSADSTAKLWSASGTEAKVTLKGHKARLGKVAFHPSGNYVGT 365          
BLAST of mRNA_P-wetherbeei_contig583.3.3 vs. uniprot
Match: W2R6V2_PHYPN (SFM domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2R6V2_PHYPN)

HSP 1 Score: 177 bits (448), Expect = 9.380e-45
Identity = 155/409 (37.90%), Postives = 204/409 (49.88%), Query Frame = 3
Query:   51 KRIFFGSIDAL-------SLKRESAEGTGAPAAALDEELEEVALGEAAIAQAKAAGNINIHDTAHTQVLALSAESRAEQEKHAELLRRLEAERRARQLIVPTKAEDVRAALRKLGQPVRLFGEKVGDVRERLKAYLARLEVDGEEAHKV-DFLATAKPPAAAAXXXXXXXXXARATGEEGATIKT------EAVYTTA-SEALVAARREIAAFSFPRTEKRLAGVKR-RRDSLPYR-QAGDTAAAELYAAMRGLVVDLSAIGDERPLSALRVAPDGTAAATGSWTSFVHVWDASSLERRCLLIGHTERVTGVAWHPNAY------GAASVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAAADRTARLWDCRTKKCVHVLRGHADRLARVDFHPSGCFVGT 1208
            K I+FG+IDA        S++  SA G       +   LE      AAI     AGN+N+ D   T+VL LS  SRA QEKHA+LLRR+EAE+RAR + VPT  E+V   LR+LG+P+ LFGE+  D RERL+  L+RLE++ EE   V + LA  +   A A           A G EGA  K       +  Y    +EAL   R  I A +      RL   ++ +R SL  R +  D  AAELYA    +    S  GD RPL+++R + DG   ATGSW+S V +WDA++     +  GH +RVTGVAWHP +       GA SV                                    S +AD TARLW     + + VL+GH  RL +V FHP G ++GT
Sbjct:    5 KGIYFGAIDASAGDMVPSSVRNASANGH------MSSNLE------AAIR----AGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHEVLADIQRQDAGAG----------AAGAEGAARKATKPQEDQLFYVPIKNEALKGVRATIFAHTASVVGTRLKRERQEQRMSLEERARTIDHHAAELYATALKMANVASQNGDVRPLASVRYSADGAHVATGSWSSLVKIWDATNANEVKVFRGHEDRVTGVAWHPTSAFSEMTDGADSV---------------------------------CLCSGSADGTARLWSAARNESLAVLQGHKARLGKVAFHPLGNYLGT 354          
BLAST of mRNA_P-wetherbeei_contig583.3.3 vs. uniprot
Match: M4B2G3_HYAAE (SFM domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2G3_HYAAE)

HSP 1 Score: 177 bits (448), Expect = 1.000e-44
Identity = 143/393 (36.39%), Postives = 193/393 (49.11%), Query Frame = 3
Query:   51 KRIFFGSIDALSLKRESAEGTGAPAAALDEELEEVALGEAAIAQAKAAGNINIHDTAHTQVLALSAESRAEQEKHAELLRRLEAERRARQLIVPTKAEDVRAALRKLGQPVRLFGEKVGDVRERLKAYLARLEVDGEEAHKV----DFLATAKPPAAAAXXXXXXXXXARATGEEGATIKTEAVYTT-ASEALVAARREIAAFSFPRTEKRLAGVKRRRDSLPYRQAG--DTAAAELYAAMRGLVVDLSAIGDERPLSALRVAPDGTAAATGSWTSFVHVWDASSLERRCLLIGHTERVTGVAWHPNAYGAASVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAAADRTARLWDCRTKKCVHVLRGHADRLARVDFHPSGCFVGT 1208
            K I+FG+IDA +    +   + A            A GE AI      GN+N+ D   T+VL LS  SRA QEKHA+LLRR+EAE+RAR + VPT  E+V   LR+LG+P+ LFGE+  D RERL+  L+RL+V+ EE   V      +   +  A AA           ATG+     +++  Y    +E +   R  I A +   T  RL   ++ R      +A   D  AA LY+A + +    S  GD RP+SA+R + DG   ATGSW+S V VWDA++     +  GH +RVTGVAWHP    +     G                                 S +AD TARLW     + + VL GH  RL +V FHP G +VGT
Sbjct:    5 KGIYFGAIDASASDGHARLASDASTVN--------ASGEVAIR----VGNVNVSDAVETEVLELSESSRAAQEKHAQLLRRVEAEKRARNVAVPTVVEEVIRKLRQLGEPITLFGERPADRRERLREILSRLDVEAEENGYVRQVFGDIEKQEIAADAAGDERAAGAGETATGKLSRAHESQLFYVPLTNEKMKKVRATIFAHASSATGARLKRERQERSMSAEERARTVDQYAAGLYSAAQKMANVASQNGDVRPISAVRFSADGGHVATGSWSSLVKVWDATNANEVKVFRGHEDRVTGVAWHPTKAFSEMTDSGDSVCL---------------------------CSGSADGTARLWSAGRNEPLAVLEGHKARLGKVAFHPLGDYVGT 358          
BLAST of mRNA_P-wetherbeei_contig583.3.3 vs. uniprot
Match: A0A5D6XP59_9STRA (SFM domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XP59_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.700e-44
Identity = 145/407 (35.63%), Postives = 199/407 (48.89%), Query Frame = 3
Query:   42 AAPKRIFFGSIDALSLKRESAEGTGAPAAALDEELEEVALGEAAIAQAKAAGNINIHDTAHTQVLALSAESRAEQEKHAELLRRLEAERRARQLIVPTKAEDVRAALRKLGQPVRLFGEKVGDVRERLKAYLARLEVDGEEAHKVDFLAT------AKPPAAAAXXXXXXXXXARATG----EEGATIKTEAVY--TTASEALVAARREIAAFSFPRTEKRLAGVKRRRDSLPYRQAG-----DTAAAELYAAMRGLVVDLSAIGDERPLSALRVAPDGTAAATGSWTSFVHVWDASSLERRCLLIGHTERVTGVAWHPN-AYGAASVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAAADRTARLWDCRTKKCVHVLRGHADRLARVDFHPSGCFVGT 1208
            A  K I+FG+I    L   S     + A A      + A+          AGN+N+ D+   +VL LS  SRA QEKHA+LLRR+EAE+RAR + VPT  ++V   LR+LG+PV LFGE+  D RERL+  L+RLE++ EE   V  +         +P  A           A  TG    + G   + + ++     +EAL  AR  + A +  RT +RL   +  R +     A      D  AAELYA    ++   S  GD RP+S+++ A DG   ATGSW+  V VWDAS+     +  GH +R+TGVAWHP+ A+   S                                     SA+AD TARLW     + + VL+GH  RL +V FHPSG +VGT
Sbjct:    2 AERKGIYFGAIAPSDLVPASVRSASSAATATTSGGLDAAI---------RAGNVNVGDSGEKEVLQLSETSRAAQEKHAQLLRRVEAEKRARNISVPTSVDEVVLRLRQLGEPVTLFGERPADRRERLREILSRLELEAEETGLVHQVLLDIQQQGGRPIEAHFTVAGSSAMSAAVTGAAVAQPGDEKQEDQLFYIPIQNEALKQARAAMFAMAATRTAERLHQQRAERANADLGAAAGPSDADRHAAELYATADKMINVSSQNGDVRPISSVQYACDGQYVATGSWSGLVKVWDASTASESKVFRGHEDRITGVAWHPSRAFSEMS----------------------------DASDAVCLCSASADSTARLWAASRAEPLAVLKGHRARLGKVAFHPSGDYVGT 371          
BLAST of mRNA_P-wetherbeei_contig583.3.3 vs. uniprot
Match: K3WUN3_GLOUD (SFM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUN3_GLOUD)

HSP 1 Score: 176 bits (445), Expect = 2.830e-44
Identity = 144/404 (35.64%), Postives = 195/404 (48.27%), Query Frame = 3
Query:   42 AAPKRIFFGSIDALS---LKRESAEGTGAPAAALDEELEEVALGEAAIAQAKAAGNINIHDTAHTQVLALSAESRAEQEKHAELLRRLEAERRARQLIVPTKAEDVRAALRKLGQPVRLFGEKVGDVRERLKAYLARLEVDGEEA---HKV--DFLATAKPPAAAAXXXXXXXXXARATGEEGATIKTEA---VYTTASEALVAARREIAAFSFPRTEKRLAGVKRRRDSL---PYRQAGDTAAAELYAAMRGLVVDLSAIGDERPLSALRVAPDGTAAATGSWTSFVHVWDASSLERRCLLIGHTERVTGVAWHP-NAYGAASVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAAADRTARLWDCRTKKCVHVLRGHADRLARVDFHPSGCFVGT 1208
            A  K I+FG+I A +   L   SA       +ALD     +A+          AGN+N+ DT   +VL LS  S+  QEKHA+LLRR+EAE+RAR + VPT AEDV   LR+L +P+ LFGE+  D RERL+  L+RLE++ EE    H+V  D       P  A             T E  A    E         +  L  AR  +  ++  RT +RL   ++ +        + A D  AAELYA  + ++   S  GD RP+++++ + DG   ATGSW+  V VWDA+S     +  GH +RVTGVAWHP N +   S                                     S +AD TARLW     +   VL+GH  RL +V FHPSG +VGT
Sbjct:    2 AERKGIYFGAISAAASSDLVPASARKDSKTVSALD-----IAI---------RAGNVNVSDTVEKEVLQLSESSKLAQEKHAQLLRRIEAEKRARNIAVPTIAEDVILRLRQLNEPITLFGERPADRRERLREILSRLELEAEETGFVHQVLRDIQQQGGRPLEAHFDAGAAAAAVSETQENRAQQAQEDQLFYIPIQNNELKTARTAMFTYAATRTAERLQAERKEKAMTVDDEAKHAIDHHAAELYATAQKMINVASQNGDVRPIASIQYSSDGAHVATGSWSGLVKVWDAASAAETKVFRGHEDRVTGVAWHPSNCFSDMS----------------------------DQSDAVCLCSGSADSTARLWSASRAEPAAVLKGHRARLGKVAFHPSGDYVGT 363          
BLAST of mRNA_P-wetherbeei_contig583.3.3 vs. uniprot
Match: G4ZDF0_PHYSP (SFM domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZDF0_PHYSP)

HSP 1 Score: 175 bits (444), Expect = 3.700e-44
Identity = 151/410 (36.83%), Postives = 200/410 (48.78%), Query Frame = 3
Query:   51 KRIFFGSIDALS--LKRESAEGT---GAPAAALDEELEEVALGEAAIAQAKAAGNINIHDTAHTQVLALSAESRAEQEKHAELLRRLEAERRARQLIVPTKAEDVRAALRKLGQPVRLFGEKVGDVRERLKAYLARLEVDGEEA---HKVDFLATAKPPAAAAXXXXXXXXXARATGEEGATIKTEAVYT--------TASEALVAARREI--AAFSFPRTEKRLAGVKRRRDSLPYRQAGDTAAAELYAAMRGLVVDLSAIGDERPLSALRVAPDGTAAATGSWTSFVHVWDASSLERRCLLIGHTERVTGVAWHP-NAY-----GAASVPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAAADRTARLWDCRTKKCVHVLRGHADRLARVDFHPSGCFVGT 1208
            K I+FG+IDA +  +   S  GT   G  A+ L          EAAI     AGN+N+ D   T+VL LS  SRA QEKHA+LLRR+EAE+RAR + VPT  E+V   LR+LG+P+ LFGE+  D RERL+  L+RLE++ EE    H+V      +   A A           A G+     + +  Y         TA  A+ A    +  A     R EK+++  +R R         D  AAELYA    +    S  GD RPL+++R + DG   ATGSW+S V VWDA++     +  GH +RV+ VAWHP N +     GA SV                                    S +AD TARLW     + + VLRGH  RL +V FHP G +VGT
Sbjct:    5 KGIYFGAIDASAGDMVPSSVRGTSGGGRMASNL----------EAAIR----AGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHQVLADIQKQDGGAGAPAEGTAAGDEGAAGQASKPQEDQLFYVPIKNDGLKTARAAVFAHTTSVVGARLKRERQEKQMSAEERARTM-------DHHAAELYATALRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWDANNAAEVKVFRGHEDRVSAVAWHPSNTFSEMTDGADSV---------------------------------CLCSGSADGTARLWSAARSEPLAVLRGHKARLGKVAFHPLGNYVGT 360          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig583.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2WFU9_9STRA1.300e-7052.49Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YL38_9STRA3.260e-7044.89Quinon protein alcohol dehydrogenase-like superfam... [more]
D8LGI0_ECTSI3.680e-6237.09SFM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A2P4X876_9STRA1.480e-4737.22U4/U6 small nuclear ribonucleoprotein Prp4 (Fragme... [more]
A0A8K1CIV4_PYTOL4.640e-4635.73Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W2R6V2_PHYPN9.380e-4537.90SFM domain-containing protein n=14 Tax=Phytophthor... [more]
M4B2G3_HYAAE1.000e-4436.39SFM domain-containing protein n=1 Tax=Hyaloperonos... [more]
A0A5D6XP59_9STRA1.700e-4435.63SFM domain-containing protein n=1 Tax=Pythium bras... [more]
K3WUN3_GLOUD2.830e-4435.64SFM domain-containing protein n=1 Tax=Globisporang... [more]
G4ZDF0_PHYSP3.700e-4436.83SFM domain-containing protein n=5 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig583contigP-wetherbeei_contig583:2605..4761 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LGI0
PFAMsPRP4,WD40
Model size1842
Max annot lvl2759|Eukaryota
KEGG koko:K12662
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0015030,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0017069,GO:0017070,GO:0030532,GO:0030621,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0046540,GO:0070013,GO:0071001,GO:0071005,GO:0071011,GO:0071704,GO:0090304,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1901363,GO:1990904
Exons3
Evalue2.81e-63
EggNOG OGsKOG0272@1|root,KOG0272@2759|Eukaryota
DescriptionU4 snRNA binding
Cds size1734
COG categoryS
BRITEko00000,ko00001,ko00002,ko03041
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186863.556675-UTR-P-wetherbeei_contig583:2604..26361683186863.556675-UTR-P-wetherbeei_contig583:2604..2636Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig583 2605..2636 +
1683186863.590147-UTR-P-wetherbeei_contig583:4685..47611683186863.590147-UTR-P-wetherbeei_contig583:4685..4761Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig583 4686..4761 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186863.5660245-CDS-P-wetherbeei_contig583:2636..28261683186863.5660245-CDS-P-wetherbeei_contig583:2636..2826Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig583 2637..2826 +
1683186863.574076-CDS-P-wetherbeei_contig583:2947..40141683186863.574076-CDS-P-wetherbeei_contig583:2947..4014Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig583 2948..4014 +
1683186863.5821626-CDS-P-wetherbeei_contig583:4208..46851683186863.5821626-CDS-P-wetherbeei_contig583:4208..4685Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig583 4209..4685 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig583.3.3prot_P-wetherbeei_contig583.3.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig583 2637..4685 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig583.3.3

>prot_P-wetherbeei_contig583.3.3 ID=prot_P-wetherbeei_contig583.3.3|Name=mRNA_P-wetherbeei_contig583.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=578bp
MSGAAPKRIFFGSIDALSLKRESAEGTGAPAAALDEELEEVALGEAAIAQ
AKAAGNINIHDTAHTQVLALSAESRAEQEKHAELLRRLEAERRARQLIVP
TKAEDVRAALRKLGQPVRLFGEKVGDVRERLKAYLARLEVDGEEAHKVDF
LATAKPPAAAAAPAAAEGAAARATGEEGATIKTEAVYTTASEALVAARRE
IAAFSFPRTEKRLAGVKRRRDSLPYRQAGDTAAAELYAAMRGLVVDLSAI
GDERPLSALRVAPDGTAAATGSWTSFVHVWDASSLERRCLLIGHTERVTG
VAWHPNAYGAASVPPGAAAAGGGLDAMDDDGGVNSGSGINGGGGPILLAS
AAADRTARLWDCRTKKCVHVLRGHADRLARVDFHPSGCFVGTASFDHTWR
LWDCETGQELLLQDGHRKEVYAISFQKEGGLVMTGDLGGAAMAWDLRSGK
SVARFEGHIKRITCGDFSPNGHEIATGSDDNTARIWDLRRRGCVYCLPAH
TALISDVRYGPQTGEVLATCGFDGAVKVWSTRDFGLLKALAGHEGKVTAC
DFSPDERRVLTCGFDRTVKVWAAEGPM*
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mRNA from alignment at P-wetherbeei_contig583:2605..4761+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig583.3.3 ID=mRNA_P-wetherbeei_contig583.3.3|Name=mRNA_P-wetherbeei_contig583.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2157bp|location=Sequence derived from alignment at P-wetherbeei_contig583:2605..4761+ (Phaeothamnion wetherbeei SAG_119_79)
GGCACAGGGAGCCCTAAAACCAGAAGAGTCCAATGAGTGGTGCAGCCCCA AAGCGAATCTTTTTCGGTTCGATAGATGCGCTTTCCCTCAAGCGTGAGTC TGCTGAAGGCACAGGAGCTCCTGCTGCAGCTCTCGATGAGGAGCTGGAGG AGGTCGCTCTCGGCGAGGCGGCGATTGCGCAGGCCAAGGCGGCCGGTAAC ATCAACATTCATGATACAGCACGTGAGTTTGGCTGAGAGAAAGATAGCTA CTTGGTTTTGCCATCGGCAACTCACTTCTAGAACCACGACCTCTTCTTTT CATAATCCCTTTCTCCCTTTGTAATACGCACACATGTACGCAGACACCCA AGTGCTGGCCTTATCGGCAGAGAGCCGTGCGGAGCAAGAAAAGCATGCGG AGCTGCTCCGGCGCTTGGAGGCGGAGCGGCGTGCGCGCCAGCTCATTGTG CCCACAAAGGCGGAGGATGTCAGGGCGGCGCTGCGCAAGCTGGGACAGCC TGTACGATTGTTCGGCGAAAAGGTCGGGGATGTTCGGGAGCGCTTAAAGG CCTATCTCGCCCGCCTCGAAGTGGACGGAGAAGAGGCGCACAAAGTAGAC TTTCTCGCGACGGCGAAGCCACCCGCCGCCGCCGCGGCACCAGCAGCCGC AGAAGGCGCGGCTGCACGCGCCACCGGGGAGGAGGGAGCGACGATAAAGA CGGAGGCCGTCTACACGACAGCGTCTGAGGCCCTCGTGGCAGCCCGCCGC GAGATCGCCGCGTTTTCCTTCCCCCGCACAGAGAAACGGCTCGCCGGCGT GAAGCGTCGCCGTGACAGCCTGCCCTACCGGCAGGCGGGCGACACGGCGG CGGCGGAGCTCTACGCCGCCATGCGCGGACTCGTGGTGGACCTCAGCGCC ATCGGGGACGAGCGGCCGCTGTCGGCACTCCGCGTCGCCCCGGACGGCAC CGCCGCCGCCACCGGCTCCTGGACGTCTTTTGTCCACGTGTGGGACGCGT CATCGCTAGAGCGACGGTGCCTGCTGATCGGCCACACGGAGCGCGTGACC GGCGTGGCGTGGCACCCCAACGCCTACGGCGCCGCGTCCGTTCCGCCGGG GGCCGCCGCCGCCGGCGGCGGCCTCGACGCCATGGACGACGATGGCGGCG TCAACAGCGGCAGCGGAATCAACGGTGGCGGCGGGCCGATCCTGCTGGCG TCGGCAGCGGCGGACCGGACGGCGCGGCTGTGGGACTGCCGGACCAAGAA GTGCGTCCATGTGCTGCGGGGCCATGCGGACCGGCTGGCGCGGGTGGACT TCCACCCATCGGGGTGCTTTGTGGGCACGGCGAGCTTCGACCACACATGG CGGCTGTGGGACTGCGAGACCGGCCAGGAACTCCTGTTGCAGGACGGCCA CCGCAAGGAGGTCAGTGTCTGTTTGGTGTGGTTGCGATGGTCGTATTGTC CATTCTCTACTGGTTCTGGTTCATCCATCTTGATGGTCCCAGCTCTGTTA ATTCCTCAATATCCAACATGAGCCCCTCCTTACCAGGCGGTTCATCTTTT CACTGGATGGAATTCTTTTGTCCTTTTTGCGAAACACGCCAACAACCTGA CCAGGTGTACGCGATATCGTTCCAGAAGGAAGGCGGGTTGGTCATGACGG GGGACCTGGGCGGCGCCGCCATGGCGTGGGACCTTCGCTCGGGTAAGAGC GTCGCGCGCTTCGAGGGCCATATCAAGCGCATCACCTGCGGCGACTTCAG CCCCAACGGCCACGAAATCGCCACCGGCAGCGACGACAACACTGCCCGCA TCTGGGACCTGCGGCGCCGCGGCTGCGTCTACTGCCTGCCGGCCCACACG GCGCTCATCTCGGACGTGCGCTACGGCCCGCAGACCGGAGAGGTCCTTGC GACGTGCGGCTTCGATGGCGCCGTCAAGGTGTGGAGCACACGGGACTTTG GGCTTCTGAAGGCGCTAGCGGGCCACGAGGGCAAGGTGACCGCCTGCGAC TTCTCCCCGGACGAGCGGCGCGTCCTCACTTGCGGTTTCGACCGCACCGT GAAGGTCTGGGCCGCCGAGGGCCCGATGTAACCCGGGCCGACAGGAGCAA GCAGTTCACGATGCAGTCAGAAACAAAATAATAGGAAACACATCACGTTT GAACAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig583:2605..4761+

>mRNA_P-wetherbeei_contig583.3.3 ID=mRNA_P-wetherbeei_contig583.3.3|Name=mRNA_P-wetherbeei_contig583.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1734bp|location=Sequence derived from alignment at P-wetherbeei_contig583:2605..4761+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTGGTGCAGCCCCAAAGCGAATCTTTTTCGGTTCGATAGATGCGCT
TTCCCTCAAGCGTGAGTCTGCTGAAGGCACAGGAGCTCCTGCTGCAGCTC
TCGATGAGGAGCTGGAGGAGGTCGCTCTCGGCGAGGCGGCGATTGCGCAG
GCCAAGGCGGCCGGTAACATCAACATTCATGATACAGCACACACCCAAGT
GCTGGCCTTATCGGCAGAGAGCCGTGCGGAGCAAGAAAAGCATGCGGAGC
TGCTCCGGCGCTTGGAGGCGGAGCGGCGTGCGCGCCAGCTCATTGTGCCC
ACAAAGGCGGAGGATGTCAGGGCGGCGCTGCGCAAGCTGGGACAGCCTGT
ACGATTGTTCGGCGAAAAGGTCGGGGATGTTCGGGAGCGCTTAAAGGCCT
ATCTCGCCCGCCTCGAAGTGGACGGAGAAGAGGCGCACAAAGTAGACTTT
CTCGCGACGGCGAAGCCACCCGCCGCCGCCGCGGCACCAGCAGCCGCAGA
AGGCGCGGCTGCACGCGCCACCGGGGAGGAGGGAGCGACGATAAAGACGG
AGGCCGTCTACACGACAGCGTCTGAGGCCCTCGTGGCAGCCCGCCGCGAG
ATCGCCGCGTTTTCCTTCCCCCGCACAGAGAAACGGCTCGCCGGCGTGAA
GCGTCGCCGTGACAGCCTGCCCTACCGGCAGGCGGGCGACACGGCGGCGG
CGGAGCTCTACGCCGCCATGCGCGGACTCGTGGTGGACCTCAGCGCCATC
GGGGACGAGCGGCCGCTGTCGGCACTCCGCGTCGCCCCGGACGGCACCGC
CGCCGCCACCGGCTCCTGGACGTCTTTTGTCCACGTGTGGGACGCGTCAT
CGCTAGAGCGACGGTGCCTGCTGATCGGCCACACGGAGCGCGTGACCGGC
GTGGCGTGGCACCCCAACGCCTACGGCGCCGCGTCCGTTCCGCCGGGGGC
CGCCGCCGCCGGCGGCGGCCTCGACGCCATGGACGACGATGGCGGCGTCA
ACAGCGGCAGCGGAATCAACGGTGGCGGCGGGCCGATCCTGCTGGCGTCG
GCAGCGGCGGACCGGACGGCGCGGCTGTGGGACTGCCGGACCAAGAAGTG
CGTCCATGTGCTGCGGGGCCATGCGGACCGGCTGGCGCGGGTGGACTTCC
ACCCATCGGGGTGCTTTGTGGGCACGGCGAGCTTCGACCACACATGGCGG
CTGTGGGACTGCGAGACCGGCCAGGAACTCCTGTTGCAGGACGGCCACCG
CAAGGAGGTGTACGCGATATCGTTCCAGAAGGAAGGCGGGTTGGTCATGA
CGGGGGACCTGGGCGGCGCCGCCATGGCGTGGGACCTTCGCTCGGGTAAG
AGCGTCGCGCGCTTCGAGGGCCATATCAAGCGCATCACCTGCGGCGACTT
CAGCCCCAACGGCCACGAAATCGCCACCGGCAGCGACGACAACACTGCCC
GCATCTGGGACCTGCGGCGCCGCGGCTGCGTCTACTGCCTGCCGGCCCAC
ACGGCGCTCATCTCGGACGTGCGCTACGGCCCGCAGACCGGAGAGGTCCT
TGCGACGTGCGGCTTCGATGGCGCCGTCAAGGTGTGGAGCACACGGGACT
TTGGGCTTCTGAAGGCGCTAGCGGGCCACGAGGGCAAGGTGACCGCCTGC
GACTTCTCCCCGGACGAGCGGCGCGTCCTCACTTGCGGTTTCGACCGCAC
CGTGAAGGTCTGGGCCGCCGAGGGCCCGATGTAA
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