mRNA_P-wetherbeei_contig58095.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58095.1.1
Unique NamemRNA_P-wetherbeei_contig58095.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58095.1.1 vs. uniprot
Match: A0A7W0PSN5_9CHLR (Gfo/Idh/MocA family oxidoreductase (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0PSN5_9CHLR)

HSP 1 Score: 224 bits (571), Expect = 2.250e-70
Identity = 108/169 (63.91%), Postives = 131/169 (77.51%), Query Frame = 1
Query:    1 AVGFCHRFQPHIEELKRRIEARELGQIRTFRNRFAGLLKNAEQTWFANPTISGGGALIDTSVHSIDLFRYLVGDPVTVDAVTSTTETTLGPALPVEDTAILILKTAGGALGSIEASWRTPVGEWTVTLYGTGGTAVVDYGTNELRICPVAVGGEWTTIDVPAGDRFQRE 507
            A+GFCHR+QPHIE LK  I+  ELG IR FRNRFAG L + EQTWF+NP I+GGG L DTS+HSIDLFRYLVGDPV + A+TS+ E+ LGP+L VEDT  +ILK++ GALG +E+SWRTPVGEW V ++GTGG+A+VDY    LR C    GG+W  + VP GDRF RE
Sbjct:  121 AMGFCHRYQPHIEALKAMIDGGELGVIREFRNRFAGHLASVEQTWFSNPEIAGGGVLADTSIHSIDLFRYLVGDPVHIHALTSSCESGLGPSLDVEDTGTIILKSSEGALGVLESSWRTPVGEWVVAVHGTGGSAIVDYADLTLRAC--TKGGDWADVAVPDGDRFVRE 287          
BLAST of mRNA_P-wetherbeei_contig58095.1.1 vs. uniprot
Match: A0A7V9AKG9_9CHLR (Gfo/Idh/MocA family oxidoreductase (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9AKG9_9CHLR)

HSP 1 Score: 217 bits (553), Expect = 1.370e-67
Identity = 106/168 (63.10%), Postives = 126/168 (75.00%), Query Frame = 1
Query:    4 VGFCHRFQPHIEELKRRIEARELGQIRTFRNRFAGLLKNAEQTWFANPTISGGGALIDTSVHSIDLFRYLVGDPVTVDAVTSTTETTLGPALPVEDTAILILKTAGGALGSIEASWRTPVGEWTVTLYGTGGTAVVDYGTNELRICPVAVGGEWTTIDVPAGDRFQRE 507
            VGFCHRFQP IE LK  I+  ELG +  +RNRFAG  ++ E+TWFAN  +SGGG L DTS+HSIDLFR+L+G+PV + A+TST  T LGPAL VEDTA + L+TA G +G IE+SWRTPVGEWTVT+YGT GTAVVDY    LR+      G W  +DVPAGDRF RE
Sbjct:  121 VGFCHRFQPQIEALKGMIDGGELGTVMQYRNRFAGHNRDVERTWFANRDVSGGGVLTDTSIHSIDLFRHLIGEPVRIQALTSTRATELGPALDVEDTATMTLQTADGTIGIIESSWRTPVGEWTVTVYGTAGTAVVDYSDETLRV--KRPDGAWEEVDVPAGDRFARE 286          
BLAST of mRNA_P-wetherbeei_contig58095.1.1 vs. uniprot
Match: A0A3L7VXX3_9CHLR (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7VXX3_9CHLR)

HSP 1 Score: 182 bits (462), Expect = 2.120e-55
Identity = 86/168 (51.19%), Postives = 115/168 (68.45%), Query Frame = 1
Query:    4 VGFCHRFQPHIEELKRRIEARELGQIRTFRNRFAGLLKNAEQTWFANPTISGGGALIDTSVHSIDLFRYLVGDPVTVDAVTSTTETTLGPALPVEDTAILILKTAGGALGSIEASWRTPVGEWTVTLYGTGGTAVVDYGTNELRICPVAVGGEWTTIDVPAGDRFQRE 507
            +GFCHR+QPH+E +K +IEA  +G++  FRNRFAG + N EQ WF++P ++GGG ++DT VHS+D+FR L+GD   V A   T  T LGPAL VEDTA++ L +  G +G IEASWRTP GEW V+++GT G+  +DY T +L  C     G    + VP GDRF  E
Sbjct:    1 MGFCHRYQPHVEVMKAQIEAGTIGEVIMFRNRFAGHMPNVEQRWFSDPALAGGGVIVDTCVHSVDMFRNLIGDVARVQASAVTRTTPLGPALQVEDTAVITLTSTSGVIGVIEASWRTPPGEWVVSVFGTAGSMSLDYDTMQLWHCDAH--GHKQQLAVPEGDRFVNE 166          
BLAST of mRNA_P-wetherbeei_contig58095.1.1 vs. uniprot
Match: A0A1H1R2K3_9ACTN (Oxidoreductase family, C-terminal alpha/beta domain n=2 Tax=Actinopolymorpha TaxID=117156 RepID=A0A1H1R2K3_9ACTN)

HSP 1 Score: 176 bits (447), Expect = 1.230e-51
Identity = 91/168 (54.17%), Postives = 116/168 (69.05%), Query Frame = 1
Query:    4 VGFCHRFQPHIEELKRRIEARELGQIRTFRNRFAGLLKNAEQTWFANPTISGGGALIDTSVHSIDLFRYLVGDPVTVDAVTSTTETTLGPALPVEDTAILILKTAGGALGSIEASWRTPVGEWTVTLYGTGGTAVVDYGTNELRICPVAVGGEWTTIDVPAGDRFQRE 507
            VGFCHRFQP IE +K  I    +G + TFRNRF+G L   E +WF+ P ISGGG L+DT VHS+DLFRYL+G+   V A+T+TT T+ GPAL VED+A+L L++A G LG IEASWRT  GE  VT+ GT G   +DY T  +R+  VAV G  + ++V   DRF R+
Sbjct:  121 VGFCHRFQPEIEAIKAAIAEGRIGTVLTFRNRFSGPLDGVESSWFSQPAISGGGVLMDTCVHSVDLFRYLLGEVDQVRALTATTATSRGPALEVEDSAVLSLQSADGVLGVIEASWRTAPGEAVVTVSGTHGRLQLDYAT--MRLTEVAVDGTESVVEVTGEDRFTRQ 286          
BLAST of mRNA_P-wetherbeei_contig58095.1.1 vs. uniprot
Match: A0A1I3A6I9_9ACTN (Predicted dehydrogenase n=1 Tax=Actinopolymorpha cephalotaxi TaxID=504797 RepID=A0A1I3A6I9_9ACTN)

HSP 1 Score: 167 bits (424), Expect = 3.460e-48
Identity = 89/168 (52.98%), Postives = 111/168 (66.07%), Query Frame = 1
Query:    4 VGFCHRFQPHIEELKRRIEARELGQIRTFRNRFAGLLKNAEQTWFANPTISGGGALIDTSVHSIDLFRYLVGDPVTVDAVTSTTETTLGPALPVEDTAILILKTAGGALGSIEASWRTPVGEWTVTLYGTGGTAVVDYGTNELRICPVAVGGEWTTIDVPAGDRFQRE 507
            VGFCHRFQP IE +K  I    +G   TFRNRF+G L   E +WF+ P ISGGG L+DT VHSIDL RYL G+   V A+T+TT T+ GPAL VED+A+L L++  G LG IEASWRT  GE  VT+ GT G   +DY T  +R+  V V G  + ++V   DRF R+
Sbjct:  121 VGFCHRFQPEIEAMKAAIADGRIGTALTFRNRFSGPLDGVESSWFSRPAISGGGVLMDTCVHSIDLIRYLFGEIDQVRALTATTATSRGPALEVEDSAVLSLQSTDGVLGVIEASWRTAPGEAVVTVSGTHGRLHLDYAT--MRLTEVDVDGNESVVEVTGEDRFTRQ 286          
BLAST of mRNA_P-wetherbeei_contig58095.1.1 vs. uniprot
Match: A0A7V9D053_9CHLR (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9D053_9CHLR)

HSP 1 Score: 162 bits (409), Expect = 5.660e-46
Identity = 86/168 (51.19%), Postives = 112/168 (66.67%), Query Frame = 1
Query:    4 VGFCHRFQPHIEELKRRIEARELGQIRTFRNRFAGLLKNAEQTWFANPTISGGGALIDTSVHSIDLFRYLVGDPVTVDAVTSTTETTLGPALPVEDTAILILKTAGGALGSIEASWRTPVGEWTVTLYGTGGTAVVDYGTNELRICPVAVGGEWTTIDVPAGDRFQRE 507
            +G CHRFQP I++L+  I+A ELG +R FR R       AE +WF +  ISGGG LIDT VHS+D+FRYL G+   V A+TST +T LGPA+ VED+AI+ +++  G LG +EASWRTP GE  VT+YGT   AVV+Y T +L +   A   E   I+V   +RF RE
Sbjct:  116 IGHCHRFQPQIQKLRELIDAGELGAVRMFRTRIGFHFLRAESSWFTDAEISGGGILIDTHVHSVDIFRYLCGEVEEVTALTSTMDTPLGPAMRVEDSAIMTVRSTEGVLGVMEASWRTPPGEVQVTVYGTAARAVVNYQTLQLTL-QKADEKEARPIEVEDANRFDRE 282          
BLAST of mRNA_P-wetherbeei_contig58095.1.1 vs. uniprot
Match: A0A3L7WI93_9CHLR (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7WI93_9CHLR)

HSP 1 Score: 159 bits (402), Expect = 9.090e-45
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 1
Query:    1 AVGFCHRFQPHIEELKRRIEARELGQIRTFRNRFAGLLKNAEQTWFANPTISGGGALIDTSVHSIDLFRYLVGDPVTVDAVTSTTETTLGPALPVEDTAILILKTAGGALGSIEASWRTPVGEWTVTLYGTGGTAVVDYGTNELRICPVAVGGEWTTIDVPAGDRFQRE 507
            +VGFCHR+QP I  LK  +    +G    FRNRFAG++ +  Q WF++P ++GGG ++DT VHS+DLFR+  GD   V A  +T  T LGPAL VED+AI+ L +  G LG IEASWRT  G W VT++GT GT  ++Y T  +++      G  TT+ +  GDRF  E
Sbjct:  133 SVGFCHRYQPQIVALKEALHDGMIGTPMMFRNRFAGVMPDVHQRWFSDPALAGGGVIMDTCVHSVDLFRFFFGDVRRVQASATTRATDLGPALRVEDSAIITLTSLDGVLGVIEASWRTAPGVWAVTVFGTTGTLTMNYNT--MQLVHQNAEGVATTLPIADGDRFSAE 299          
BLAST of mRNA_P-wetherbeei_contig58095.1.1 vs. uniprot
Match: A0A516PW70_9ACTN (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Microlunatus elymi TaxID=2596828 RepID=A0A516PW70_9ACTN)

HSP 1 Score: 154 bits (390), Expect = 4.760e-43
Identity = 80/169 (47.34%), Postives = 109/169 (64.50%), Query Frame = 1
Query:    1 AVGFCHRFQPHIEELKRRIEARELGQIRTFRNRFAGLLKNAEQTWFANPTISGGGALIDTSVHSIDLFRYLVGDPVTVDAVTSTTETTLGPALPVEDTAILILKTAGGALGSIEASWRTPVGEWTVTLYGTGGTAVVDYGTNELRICPVAVGGEWTTIDVPAGDRFQRE 507
            +VGFCHRFQP IE ++  I +  +G + T+RN F G L   E  WF+   +SGGG L+DT VHS+DLFR+L+G+   V A+T+TT +  GPAL VED+A L L++  G LG+IEASWR   GE TVT+ G+ G   +DY T  L +      G  + ++V  GDRF R+
Sbjct:  120 SVGFCHRFQPEIEAMRAAIRSGRIGTVLTYRNVFEGPLDGVEARWFSQTELSGGGVLMDTCVHSVDLFRFLIGEIDQVRAITATTASDRGPALAVEDSAQLTLRSTTGVLGAIEASWRVAPGEATVTVCGSQGRLQLDYST--LTLTQTDPDGNGSALEVITGDRFVRQ 286          
BLAST of mRNA_P-wetherbeei_contig58095.1.1 vs. uniprot
Match: A0A2H5WZX7_9BACT (Inositol 2-dehydrogenase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5WZX7_9BACT)

HSP 1 Score: 143 bits (360), Expect = 1.190e-38
Identity = 78/168 (46.43%), Postives = 98/168 (58.33%), Query Frame = 1
Query:    4 VGFCHRFQPHIEELKRRIEARELGQIRTFRNRFAGLLKNAEQTWFANPTISGGGALIDTSVHSIDLFRYLVGDPVTVDAVTSTTETTLGPALPVEDTAILILKTAGGALGSIEASWRTPVGEWTVTLYGTGGTAVVDYGTNELRICPVAVGGEWTTIDVPAGDRFQRE 507
              FCHRF P I  LKR IEA ELG++  FRNRFAG  K  E+ WF++  ++GGG L+DTSVHSIDLFR+L+G+   V AVT  T   +G    VEDTAI +L TA   +G +EASW    G   V +YGT G A+V Y              +W  ++    DRF  E
Sbjct:  122 TAFCHRFHPPIAALKRLIEAGELGEVVMFRNRFAGPFKGVEERWFSDKEVAGGGVLMDTSVHSIDLFRFLIGEVARVQAVTRQTNPAIGE---VEDTAIALLSTADNRMGVVEASWVLAAGFNVVEVYGTEGAAMVHYWDGFKSRYKTNKMDDWQPLEESGADRFVGE 286          
BLAST of mRNA_P-wetherbeei_contig58095.1.1 vs. uniprot
Match: A0A7V3L4E8_9BACT (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3L4E8_9BACT)

HSP 1 Score: 137 bits (346), Expect = 1.400e-36
Identity = 74/165 (44.85%), Postives = 97/165 (58.79%), Query Frame = 1
Query:    4 VGFCHRFQPHIEELKRRIEARELGQIRTFRNRFAGLLKNAEQTWFANPTISGGGALIDTSVHSIDLFRYLVGDPVTVDAVTSTTETTLGPALPVEDTAILILKTAGGALGSIEASWRTPVGEWTVTLYGTGGTAVVDYGTNELRICPVAVGGEWTTIDVPAGDRF 498
              FCHRF   +   +  I+A  +G++  FRNRF G + +  QTWFANP ISGGG + DTSVHSIDLFRYLVG+   V A   T ++  G    VED + ++L+ + GA+G IEASW +P     + +YGT G  ++DY T  LR   V   G W     P  DRF
Sbjct:  115 TAFCHRFHEPVMRARDLIKAGRIGKVTMFRNRFGGKI-DMTQTWFANPEISGGGTIPDTSVHSIDLFRYLVGEASKVCAAVETADSRYG----VEDCSTILLQASNGAIGVIEASWTSPGSANVIEIYGTDGAIIIDYSTGGLRFM-VDNSGSWQQEPCPNADRF 273          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58095.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7W0PSN5_9CHLR2.250e-7063.91Gfo/Idh/MocA family oxidoreductase (Fragment) n=1 ... [more]
A0A7V9AKG9_9CHLR1.370e-6763.10Gfo/Idh/MocA family oxidoreductase (Fragment) n=1 ... [more]
A0A3L7VXX3_9CHLR2.120e-5551.19Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chlorof... [more]
A0A1H1R2K3_9ACTN1.230e-5154.17Oxidoreductase family, C-terminal alpha/beta domai... [more]
A0A1I3A6I9_9ACTN3.460e-4852.98Predicted dehydrogenase n=1 Tax=Actinopolymorpha c... [more]
A0A7V9D053_9CHLR5.660e-4651.19Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chlorof... [more]
A0A3L7WI93_9CHLR9.090e-4547.34Gfo/Idh/MocA family oxidoreductase n=1 Tax=Chlorof... [more]
A0A516PW70_9ACTN4.760e-4347.34Gfo/Idh/MocA family oxidoreductase n=1 Tax=Microlu... [more]
A0A2H5WZX7_9BACT1.190e-3846.43Inositol 2-dehydrogenase n=2 Tax=Bacteria TaxID=2 ... [more]
A0A7V3L4E8_9BACT1.400e-3644.85Gfo/Idh/MocA family oxidoreductase n=1 Tax=Armatim... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58095contigP-wetherbeei_contig58095:1..507 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog926550.CLDAP_03040
PFAMsGFO_IDH_MocA,GFO_IDH_MocA_C
Model size507
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.86e-31
EggNOG OGsCOG0673@1|root,COG0673@2|Bacteria
Descriptioninositol 2-dehydrogenase activity
Cds size507
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186860.9379137-CDS-P-wetherbeei_contig58095:0..5071683186860.9379137-CDS-P-wetherbeei_contig58095:0..507Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58095 1..507 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58095.1.1prot_P-wetherbeei_contig58095.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58095 1..507 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58095.1.1

>prot_P-wetherbeei_contig58095.1.1 ID=prot_P-wetherbeei_contig58095.1.1|Name=mRNA_P-wetherbeei_contig58095.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp
AVGFCHRFQPHIEELKRRIEARELGQIRTFRNRFAGLLKNAEQTWFANPT
ISGGGALIDTSVHSIDLFRYLVGDPVTVDAVTSTTETTLGPALPVEDTAI
LILKTAGGALGSIEASWRTPVGEWTVTLYGTGGTAVVDYGTNELRICPVA
VGGEWTTIDVPAGDRFQRE
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mRNA from alignment at P-wetherbeei_contig58095:1..507-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58095.1.1 ID=mRNA_P-wetherbeei_contig58095.1.1|Name=mRNA_P-wetherbeei_contig58095.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig58095:1..507- (Phaeothamnion wetherbeei SAG_119_79)
GCCGTCGGCTTCTGCCACCGGTTCCAGCCGCACATCGAGGAGCTGAAGCG CCGCATCGAGGCGCGCGAGCTCGGCCAGATCCGCACCTTCCGCAACCGCT TCGCCGGCCTCCTGAAGAACGCCGAGCAGACCTGGTTCGCCAACCCTACC ATCAGCGGCGGCGGCGCCCTGATCGACACCAGCGTCCACTCGATCGACCT CTTCCGCTATCTCGTCGGCGATCCCGTCACGGTCGATGCGGTGACGAGCA CGACGGAGACGACGCTCGGCCCGGCCCTGCCGGTGGAGGACACCGCGATC CTGATCCTGAAGACCGCCGGAGGCGCGCTCGGCTCGATCGAGGCGAGCTG GCGGACACCGGTCGGCGAATGGACGGTGACGCTCTACGGCACCGGCGGCA CGGCGGTGGTCGATTACGGCACGAACGAGTTGCGCATCTGCCCCGTGGCT GTCGGCGGCGAGTGGACGACGATTGATGTCCCGGCCGGCGACCGCTTCCA GCGCGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58095:1..507-

>mRNA_P-wetherbeei_contig58095.1.1 ID=mRNA_P-wetherbeei_contig58095.1.1|Name=mRNA_P-wetherbeei_contig58095.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig58095:1..507- (Phaeothamnion wetherbeei SAG_119_79)
GCCGTCGGCTTCTGCCACCGGTTCCAGCCGCACATCGAGGAGCTGAAGCG
CCGCATCGAGGCGCGCGAGCTCGGCCAGATCCGCACCTTCCGCAACCGCT
TCGCCGGCCTCCTGAAGAACGCCGAGCAGACCTGGTTCGCCAACCCTACC
ATCAGCGGCGGCGGCGCCCTGATCGACACCAGCGTCCACTCGATCGACCT
CTTCCGCTATCTCGTCGGCGATCCCGTCACGGTCGATGCGGTGACGAGCA
CGACGGAGACGACGCTCGGCCCGGCCCTGCCGGTGGAGGACACCGCGATC
CTGATCCTGAAGACCGCCGGAGGCGCGCTCGGCTCGATCGAGGCGAGCTG
GCGGACACCGGTCGGCGAATGGACGGTGACGCTCTACGGCACCGGCGGCA
CGGCGGTGGTCGATTACGGCACGAACGAGTTGCGCATCTGCCCCGTGGCT
GTCGGCGGCGAGTGGACGACGATTGATGTCCCGGCCGGCGACCGCTTCCA
GCGCGAG
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