mRNA_P-wetherbeei_contig5803.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5803.2.2
Unique NamemRNA_P-wetherbeei_contig5803.2.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5803.2.2 vs. uniprot
Match: K3WFY4_GLOUD (JmjC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFY4_GLOUD)

HSP 1 Score: 99.4 bits (246), Expect = 3.260e-21
Identity = 69/181 (38.12%), Postives = 89/181 (49.17%), Query Frame = 2
Query:   65 MEAAFVHISDDVRSLWAP-SSIRRIAWSDICGPEXXXXXXXXXXXXVIITGAM---DDWR-ALSEWSIDG-LQGKVGDVPVTVNVTPDGHGDCVKPASHGGDELKSVNHTPAGPEVFVKPEERRMTFSEFAAAMQSPASFAGVPYLSHQNDNLRSELSALEADVGRGVADFAEAVFGCRPD 589
            + A+   + +DV   WAP   + R+  S +   E            V++T  M    DW+  L  W  D  L  + GD PVTV+VTP G GD V   +    + +  +      EVFV PEER MTFSEF AA+     F GVPYLSHQND+LR E   L  DV     + A+  FG  PD
Sbjct:    9 VHASITKLREDVADFWAPLHEVARVDASSLSALEFYRRFVSKSVP-VVLTNVMANAPDWQQVLQHWHDDAYLVEQAGDDPVTVDVTPFGFGDAVLDLNTDRSDAQKTS------EVFVMPEEREMTFSEFLAALNDRDGFEGVPYLSHQNDSLRDEFPMLYQDVP-AYLELAKDAFGNEPD 181          
BLAST of mRNA_P-wetherbeei_contig5803.2.2 vs. uniprot
Match: A0A8J6CEM8_DIALT (JmjC domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CEM8_DIALT)

HSP 1 Score: 96.7 bits (239), Expect = 2.510e-20
Identity = 72/190 (37.89%), Postives = 99/190 (52.11%), Query Frame = 2
Query:   32 HRSFVAASTPAMEAAFVHISDDVRSLWAPSSIRRIAWSDICGPEXXXXXXXXXXXXVIITGAMD--DW-RALSEWSIDGLQGKVGDVPVTVNVTPDGHGDCVKPASHGGDELKSVNHTPAGPEVFVKPEERRMTFSEFAAAMQSPASFAG-VPYLSHQNDNLRSELSALEADVGRGVADFAEAVFGCRPD 589
            H    A    A+E A   ++ + R+LW P+ +  +  +    P              I+ GAMD  +W RA   WS++ L   +G +PVTVNVTP G GD V     GG   + +    A    F KPEER MTF++FA A++  A  AG V YLS Q+ NLR++ + + ADV   V  FA+AV GC PD
Sbjct:   10 HGDVAACRLRAVEKAAAWLAAESRALWVPAHVPCLNGAP--PPLAFLREHVLMSAPCIVRGAMDGAEWARARELWSLEYLSAAMGALPVTVNVTPHGRGDAVV----GGTATRGLVIGGA----FAKPEEREMTFAQFADALRKGAHGAGGVHYLSLQDGNLRAQHAPIAADVPAAVGWFADAV-GCAPD 188          
BLAST of mRNA_P-wetherbeei_contig5803.2.2 vs. uniprot
Match: A0A820XBW2_9BILA (Hypothetical protein n=4 Tax=Bdelloidea TaxID=44578 RepID=A0A820XBW2_9BILA)

HSP 1 Score: 87.4 bits (215), Expect = 6.890e-18
Identity = 56/172 (32.56%), Postives = 81/172 (47.09%), Query Frame = 2
Query:   77 FVHISDDVRSLWAPSSIRRIAWSDICGPEXXXXXXXXXXXXVIITGAMDDWRALSEWSI-DGLQGKVGDVPVTVNVTPDGHGDCVKPASHGGDELKSVNHTPAGPEVFVKPEERRMTFSEFAAAMQSPASFAGVPYLSHQNDNLRSELSALEADVGRGVADFAEAVFGCRPD 589
            F  +S + R L+  S I RI    +  P             VII GA+D W ALS+W+  + L+ ++GD PVT+++TPDG+GDCVK   +                 FV P E +M F+ F   ++   SF G+ Y  HQN +  +E   L  D+      +    FG  PD
Sbjct:    8 FQCLSQEARELYLESRISRIR---VPSPLVFYRDYVSRNKPVIIQGALDQWSALSKWNTSEYLRHQLGDTPVTIDITPDGYGDCVKLHKY-----------------FVTPLEEKMPFNYFMDIIEGKKSFNGIVYCQHQNSSFTTEFQQLNNDIHE--LSWVREAFGNPPD 157          
BLAST of mRNA_P-wetherbeei_contig5803.2.2 vs. uniprot
Match: A0A7R9UF42_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF42_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.540e-17
Identity = 48/105 (45.71%), Postives = 66/105 (62.86%), Query Frame = 2
Query:  203 IITGAMDDWRALSEWSIDGLQGKVGDVPVTVNVTPDGHGDCVKPASH--GGDELKSVNHTPAGPEVFVKPEERRMTFSEFAAAMQSPASFAG-VPYLSHQNDNLR 508
            ++ G ++ WRAL  W+I+ L+ +VG  PVTVNVTPDG GDC++      GG E           + FV PEERRMTFSEF   +++ ++ +  + YLSHQND LR
Sbjct:   47 VLEGQLEGWRALDTWTIEALEERVGKQPVTVNVTPDGRGDCIRKIREVEGGQEY----------DAFVLPEERRMTFSEFCQNIRTQSADSDEIVYLSHQNDCLR 141          
BLAST of mRNA_P-wetherbeei_contig5803.2.2 vs. uniprot
Match: A0A814I535_9BILA (Hypothetical protein n=4 Tax=Adineta steineri TaxID=433720 RepID=A0A814I535_9BILA)

HSP 1 Score: 88.2 bits (217), Expect = 2.160e-17
Identity = 55/172 (31.98%), Postives = 83/172 (48.26%), Query Frame = 2
Query:   77 FVHISDDVRSLWAPSSIRRIAWSDICGPEXXXXXXXXXXXXVIITGAMDDWRALSEW-SIDGLQGKVGDVPVTVNVTPDGHGDCVKPASHGGDELKSVNHTPAGPEVFVKPEERRMTFSEFAAAMQSPASFAGVPYLSHQNDNLRSELSALEADVGRGVADFAEAVFGCRPD 589
            F  +S + R L+  + I RI+   +  P             VII GA++ W ALS+W + D L+ ++GD PVT+++TPDG+GDCVK   +                 FV P E +M F++F   ++   SF G+ Y  HQN +  +E   L  D+      +    FG  PD
Sbjct:    8 FQCLSQEARELYLENRISRIS---VPTPLVFYRDYVSRNKPVIIQGALEQWSALSKWQNSDYLRQQLGDTPVTIDITPDGYGDCVKLHKY-----------------FVTPLEEKMPFNQFMNIIEGKKSFNGIVYCQHQNSSFTTEFQQLNNDINE--LSWVREAFGNPPD 157          
BLAST of mRNA_P-wetherbeei_contig5803.2.2 vs. uniprot
Match: A0A817TEE1_9BILA (Hypothetical protein n=7 Tax=Rotaria TaxID=231623 RepID=A0A817TEE1_9BILA)

HSP 1 Score: 88.2 bits (217), Expect = 2.410e-17
Identity = 55/172 (31.98%), Postives = 81/172 (47.09%), Query Frame = 2
Query:   77 FVHISDDVRSLWAPSSIRRIAWSDICGPEXXXXXXXXXXXXVIITGAMDDWRALSEWS-IDGLQGKVGDVPVTVNVTPDGHGDCVKPASHGGDELKSVNHTPAGPEVFVKPEERRMTFSEFAAAMQSPASFAGVPYLSHQNDNLRSELSALEADVGRGVADFAEAVFGCRPD 589
            F  +S + R L+  S I RI    +  P             VII GA+D W ALS+W+ ++  + ++GD PVT+++TPDG+GDCVK   +                 FV P E +M F+ F   ++   SF G+ Y  HQN +  +E   L  D+      +    FG  PD
Sbjct:   16 FQCLSQEARELYLESHISRIP---VPSPLVFYRDYVSRNRPVIIQGALDQWSALSKWNTLNYFRDQLGDTPVTIDITPDGYGDCVKLHKY-----------------FVTPVEEKMPFNHFMDIIEGKKSFDGIVYCQHQNSSFTTEFQQLNNDIHE--LGWVREAFGQAPD 165          
BLAST of mRNA_P-wetherbeei_contig5803.2.2 vs. uniprot
Match: A0A2R5GJJ9_9STRA (Lysine-specific demethylase 8 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJJ9_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.190e-17
Identity = 57/134 (42.54%), Postives = 65/134 (48.51%), Query Frame = 2
Query:  200 VIITGAMDDWRALSEWSIDGLQGKVGDVPVTVNVTPDGHGDCVKPASHGGDELKSVNHTPAGPEVFVKPEERRMTFSEFAAAMQSPASF--------AGVPYLSHQNDNLRSELSALEADVGRGVADFAEAVFG 577
            VII G +D+W A   W    L G  G   + VNVTP GHGDCV+                    VFVKP E  MT  EF   +    +          GVPYLSHQNDNLR EL  LEAD+  G A  A+A FG
Sbjct:   70 VIIDGLVDEWPAAQRWDPAYLCGAAGSQKLHVNVTPGGHGDCVRDG------------------VFVKPAEVEMTMQEFFDKLGQGTNRDLGADQDGEGVPYLSHQNDNLRQELPFLEADLPDGFA-LAQAAFG 184          
BLAST of mRNA_P-wetherbeei_contig5803.2.2 vs. uniprot
Match: A0A820TIT8_9BILA (Hypothetical protein n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A820TIT8_9BILA)

HSP 1 Score: 86.3 bits (212), Expect = 3.480e-17
Identity = 51/155 (32.90%), Postives = 76/155 (49.03%), Query Frame = 2
Query:   77 FVHISDDVRSLWAPSSIRRIAWSDICGPEXXXXXXXXXXXXVIITGAMDDWRALSEWS-IDGLQGKVGDVPVTVNVTPDGHGDCVKPASHGGDELKSVNHTPAGPEVFVKPEERRMTFSEFAAAMQSPASFAGVPYLSHQNDNLRSELSALEADV 538
            F  +S + R L+  S I RI    +  P             VII GA+D W ALS+W+ ++  + ++GD PVT+++TPDG+GDCVK   +                 FV P E +M F+ F   ++   SF G+ Y  HQN +  +E   L  D+
Sbjct:   16 FQCLSQEARELYLESHISRIP---VPSPLVFYRDYVSRNRPVIIQGALDQWSALSKWNTLNYFRDQLGDTPVTIDITPDGYGDCVKLHKY-----------------FVTPVEEKMPFNHFMDIIEGKKSFDGIVYCQHQNSSFTTEFQQLNNDI 150          
BLAST of mRNA_P-wetherbeei_contig5803.2.2 vs. uniprot
Match: A0A813QGU0_9BILA (Hypothetical protein n=9 Tax=Rotaria TaxID=231623 RepID=A0A813QGU0_9BILA)

HSP 1 Score: 86.7 bits (213), Expect = 8.480e-17
Identity = 56/172 (32.56%), Postives = 81/172 (47.09%), Query Frame = 2
Query:   77 FVHISDDVRSLWAPSSIRRIAWSDICGPEXXXXXXXXXXXXVIITGAMDDWRALSEWSI-DGLQGKVGDVPVTVNVTPDGHGDCVKPASHGGDELKSVNHTPAGPEVFVKPEERRMTFSEFAAAMQSPASFAGVPYLSHQNDNLRSELSALEADVGRGVADFAEAVFGCRPD 589
            F  +S + R L+  S I RI    I  P             VII GA+D W ALS+W+  + L+ ++GD  VT+++TPDG+GDCVK   +                 FV P E +M+F+ F   ++   SF G+ Y  HQN +  +E   L  D+      +    FG  PD
Sbjct:   12 FQCLSQEARELYLESHISRIR---IPSPLVFYRDYVSRNKPVIIQGALDQWSALSKWNTSEYLRHQLGDTQVTIDITPDGYGDCVKLHKY-----------------FVTPLEEKMSFNHFMDIIEGKTSFNGIVYCQHQNSSFTTEFQQLNNDIHE--LSWVREAFGNPPD 161          
BLAST of mRNA_P-wetherbeei_contig5803.2.2 vs. uniprot
Match: A0A482SCJ2_9ARCH (Cupin-like domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCJ2_9ARCH)

HSP 1 Score: 85.9 bits (211), Expect = 1.590e-16
Identity = 54/126 (42.86%), Postives = 71/126 (56.35%), Query Frame = 2
Query:  200 VIITGAMDDWRALSEWSIDGLQGKVGDVPVTVNVTPDGHGDCVKPASHGGDELKSVNHTPAGPEVFVKPEERRMTFSEFAAAMQSPASFAGVPYLSHQNDNLRSELSALEADVGRGVADFAEAVFG 577
            VII G +D+W AL  W  D L  KVGD PV++N+TPDG  D V+  S  G+  KSV H       FV P E +M+ + F + +    S   V YLS QNDNLR+E S L +D+   +   A+  FG
Sbjct:   48 VIIKGLIDNWPALRLWDRDYLINKVGDAPVSINLTPDGRADSVQ--SIVGEGGKSVEH-------FVFPAETKMSMANFFSLLDDNQSSV-VAYLSQQNDNLRAETSCLLSDIAESIP-LADKNFG 162          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5803.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K3WFY4_GLOUD3.260e-2138.12JmjC domain-containing protein n=1 Tax=Globisporan... [more]
A0A8J6CEM8_DIALT2.510e-2037.89JmjC domain-containing protein n=1 Tax=Diacronema ... [more]
A0A820XBW2_9BILA6.890e-1832.56Hypothetical protein n=4 Tax=Bdelloidea TaxID=4457... [more]
A0A7R9UF42_9STRA1.540e-1745.71Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A814I535_9BILA2.160e-1731.98Hypothetical protein n=4 Tax=Adineta steineri TaxI... [more]
A0A817TEE1_9BILA2.410e-1731.98Hypothetical protein n=7 Tax=Rotaria TaxID=231623 ... [more]
A0A2R5GJJ9_9STRA3.190e-1742.54Lysine-specific demethylase 8 n=1 Tax=Hondaea ferm... [more]
A0A820TIT8_9BILA3.480e-1732.90Hypothetical protein n=1 Tax=Rotaria socialis TaxI... [more]
A0A813QGU0_9BILA8.480e-1732.56Hypothetical protein n=9 Tax=Rotaria TaxID=231623 ... [more]
A0A482SCJ2_9ARCH1.590e-1642.86Cupin-like domain-containing protein n=1 Tax=archa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5803contigP-wetherbeei_contig5803:2896..3694 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog112098.XP_008614958.1
Preferred nameJMJD7
PFAMsC2,Cupin_8,PLA2_B
Model size589
Max annot lvl2759|Eukaryota
KEGG rclassRC00037,RC00094
KEGG koko:K16342,ko:K19219,ko:K20989
KEGG TC2.A.21.6
KEGG ReactionR01315,R01317,R02053,R07064,R07379,R07387,R07859
KEGG Pathwayko00564,ko00565,ko00590,ko00591,ko00592,ko01100,ko01110,ko04010,ko04014,ko04072,ko04217,ko04270,ko04370,ko04611,ko04664,ko04724,ko04726,ko04730,ko04750,ko04912,ko04913,ko04921,ko05231,map00564,map00565,map00590,map00591,map00592,map01100,map01110,map04010,map04014,map04072,map04217,map04270,map04370,map04611,map04664,map04724,map04726,map04730,map04750,map04912,map04913,map04921,map05231
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
Exons3
Evalue4.06e-30
EggNOG OGsCOG1226@1|root,KOG2508@2759|Eukaryota
EC3.1.1.4
DescriptionCupin-like domain
Cds size525
COG categoryP
BRITEko00000,ko00001,ko01000,ko02000,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186860.296469-UTR-P-wetherbeei_contig5803:2895..29591683186860.296469-UTR-P-wetherbeei_contig5803:2895..2959Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5803 2896..2959 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186860.3083458-CDS-P-wetherbeei_contig5803:2959..31881683186860.3083458-CDS-P-wetherbeei_contig5803:2959..3188Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5803 2960..3188 +
1683186860.3163886-CDS-P-wetherbeei_contig5803:3278..33361683186860.3163886-CDS-P-wetherbeei_contig5803:3278..3336Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5803 3279..3336 +
1683186860.3242521-CDS-P-wetherbeei_contig5803:3456..36941683186860.3242521-CDS-P-wetherbeei_contig5803:3456..3694Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5803 3457..3694 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5803.2.2prot_P-wetherbeei_contig5803.2.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5803 2960..3694 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5803.2.2

>prot_P-wetherbeei_contig5803.2.2 ID=prot_P-wetherbeei_contig5803.2.2|Name=mRNA_P-wetherbeei_contig5803.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=175bp
MEAAFVHISDDVRSLWAPSSIRRIAWSDICGPEGFHRSFVASSTPVIITG
AMDDWRALSEWSIDGLQGKVGDVPVTVNVTPDGHGDCVKPASHGGDELKS
VNHTPAGPEVFVKPEERRMTFSEFAAAMQSPASFAGVPYLSHQNDNLRSE
LSALEADVGRGVADFAEAVFGCRPD
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mRNA from alignment at P-wetherbeei_contig5803:2896..3694+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5803.2.2 ID=mRNA_P-wetherbeei_contig5803.2.2|Name=mRNA_P-wetherbeei_contig5803.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=799bp|location=Sequence derived from alignment at P-wetherbeei_contig5803:2896..3694+ (Phaeothamnion wetherbeei SAG_119_79)
GTGAACTCCAGCCGAGCTTCCCAACTCGTTTCACCGAAGCTTCGTTGCTG CGAGCACGCCAGCAATGGAAGCAGCGTTCGTCCATATCTCCGACGACGTC CGCTCGCTTTGGGCTCCTTCGAGCATTAGACGCATCGCCTGGAGCGATAT CTGCGGTCCCGAGGGGTTTCATCGAAGCTTCGTCGCCTCGAGCACACCAG TAATCATCACAGGCGCCATGGACGACTGGCGGGCGCTGAGCGAATGGTCG ATAGATGGATTGCAAGGAAAGGTTGGCGATGTACCAGTAACAGGTTAGAA TAGCTGCCTTCCCTCCTTCTTGTTGTCTTTCATCCCAAAATGTCGAAGAT CTGATCATTTCTTATGACGACATACCATTGCAGTGAACGTCACTCCGGAT GGGCATGGCGATTGCGTGAAGCCTGCTTCTCATGGCGGTGAGTAAGGGCA CCCTGGTTCTCTAAAAGTTGATGATAGGCGCATAGTACTTTCACTTCACA GGCATTCCTTTCGCCTTCGAGCGGCATTCTGACCTTGAAGCTCCTCGAAG AACGTGCTAAGCGAACTGAAAAGTGTGAACCACACACCTGCAGGGCCCGA GGTGTTTGTCAAGCCGGAGGAGCGGCGCATGACATTCTCCGAGTTTGCGG CGGCGATGCAAAGCCCGGCATCCTTCGCCGGCGTGCCTTACTTGAGCCAC CAGAACGACAATCTGCGGTCCGAGCTATCGGCACTGGAAGCGGACGTCGG CCGCGGTGTAGCGGACTTTGCGGAGGCCGTCTTCGGCTGCCGCCCTGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5803:2896..3694+

>mRNA_P-wetherbeei_contig5803.2.2 ID=mRNA_P-wetherbeei_contig5803.2.2|Name=mRNA_P-wetherbeei_contig5803.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig5803:2896..3694+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAGCAGCGTTCGTCCATATCTCCGACGACGTCCGCTCGCTTTGGGC
TCCTTCGAGCATTAGACGCATCGCCTGGAGCGATATCTGCGGTCCCGAGG
GGTTTCATCGAAGCTTCGTCGCCTCGAGCACACCAGTAATCATCACAGGC
GCCATGGACGACTGGCGGGCGCTGAGCGAATGGTCGATAGATGGATTGCA
AGGAAAGGTTGGCGATGTACCAGTAACAGTGAACGTCACTCCGGATGGGC
ATGGCGATTGCGTGAAGCCTGCTTCTCATGGCGGTGACGAACTGAAAAGT
GTGAACCACACACCTGCAGGGCCCGAGGTGTTTGTCAAGCCGGAGGAGCG
GCGCATGACATTCTCCGAGTTTGCGGCGGCGATGCAAAGCCCGGCATCCT
TCGCCGGCGTGCCTTACTTGAGCCACCAGAACGACAATCTGCGGTCCGAG
CTATCGGCACTGGAAGCGGACGTCGGCCGCGGTGTAGCGGACTTTGCGGA
GGCCGTCTTCGGCTGCCGCCCTGAC
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