mRNA_P-wetherbeei_contig57962.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57962.1.1 vs. uniprot
Match: A0A8J9WSW7_9CHLO (Probable ubiquitin recognition factor in ER-associated degradation n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WSW7_9CHLO) HSP 1 Score: 70.9 bits (172), Expect = 1.840e-11 Identity = 40/76 (52.63%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 202 EKHRLEKLAGLPEEPPAGEADLVACVVRTGTG-RLARRFRRSDRLQVLFDFV---EAGGAPAGRYRLVTQFPRRAL 417
E+ R EK A LP EP AGEA + +C++R G R +RRFR SD L LFDFV E G G Y+LV QFPRR +
Sbjct: 320 ERLRQEKAAALPPEPAAGEAAVTSCLIRLPNGARFSRRFRASDPLLHLFDFVDSQEGAGDGPGSYKLVAQFPRRVI 395
BLAST of mRNA_P-wetherbeei_contig57962.1.1 vs. uniprot
Match: I0YPZ2_COCSC (UBX domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YPZ2_COCSC) HSP 1 Score: 69.7 bits (169), Expect = 4.480e-11 Identity = 42/78 (53.85%), Postives = 50/78 (64.10%), Query Frame = 1
Query: 196 DPEKHRLEKLAGLPEEPPAGEADLVACVVRTGTG-RLARRFRRSDRLQVLFDFVEA---GGAPAGRYRLVTQFPRRAL 417
D E+ R EK A LP EPPA EA + +C++R G R +RRFR SD L LFDFV+A G G YRLV QFPRR +
Sbjct: 293 DLERLRQEKAAALPPEPPADEA-VTSCLIRLPNGARFSRRFRASDPLLHLFDFVDAQEGAGEGPGSYRLVAQFPRRVI 369
BLAST of mRNA_P-wetherbeei_contig57962.1.1 vs. uniprot
Match: A0A2P6VJJ2_9CHLO (Acetolactate synthase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VJJ2_9CHLO) HSP 1 Score: 67.4 bits (163), Expect = 3.110e-10 Identity = 44/87 (50.57%), Postives = 51/87 (58.62%), Query Frame = 1
Query: 220 KLAGLPEEPPAGEADLVACVVRTGTG-RLARRFRRSDRLQVLFDFVEA---GGAPA----GRYRLVTQFPRRALEVEAAAGQTFVEA 456
K A LP EPPA +A+ V+ VR G R ARRFRRSD LQ +FDFV+ GGA G Y L T +PRR L A GQT +A
Sbjct: 365 KAASLPPEPPADDAEAVSLAVRLPAGGRYARRFRRSDPLQAVFDFVDVQSGGGADGSIRPGAYSLATSYPRRVLA--AGGGQTLGDA 449
BLAST of mRNA_P-wetherbeei_contig57962.1.1 vs. uniprot
Match: E1Z398_CHLVA (UBX domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z398_CHLVA) HSP 1 Score: 65.5 bits (158), Expect = 1.400e-9 Identity = 42/86 (48.84%), Postives = 52/86 (60.47%), Query Frame = 1
Query: 220 KLAGLPEEPPAGEADLVACVVRTGTG-RLARRFRRSDRLQVLFDFVE----AGGAPA--GRYRLVTQFPRRALEVEAAAGQTFVEA 456
K A LP EP A +AD V +R G R +RRFRR+D+LQ +FDFV+ AGG G Y L T +PRR LE + AA Q+ EA
Sbjct: 319 KAASLPPEPAADDADAVNLAIRLPAGGRYSRRFRRADKLQSVFDFVDVQSGAGGGDILPGSYSLATSYPRRVLE-DGAAEQSLAEA 403
BLAST of mRNA_P-wetherbeei_contig57962.1.1 vs. uniprot
Match: A0A2P6U2E1_CHLSO (Plant UBX domain-containing 8 isoform X2 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U2E1_CHLSO) HSP 1 Score: 64.7 bits (156), Expect = 3.130e-9 Identity = 36/73 (49.32%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 220 KLAGLPEEPPAGEADLVACVVRTGTG-RLARRFRRSDRLQVLFDFVEA-----GGAPAGRYRLVTQFPRRALE 420
K A LP EPP +A+ + +VR G R +RRFRRSD LQ +FDFV+ G G Y L T FPRR LE
Sbjct: 329 KAASLPAEPPGDDAEAINLMVRLPAGGRYSRRFRRSDPLQAVFDFVDVQSGVGGDIAPGSYHLATAFPRRVLE 401
BLAST of mRNA_P-wetherbeei_contig57962.1.1 vs. uniprot
Match: A0A392M0H9_9FABA (UBX domain-containing protein 1-like n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392M0H9_9FABA) HSP 1 Score: 60.8 bits (146), Expect = 3.690e-9 Identity = 34/76 (44.74%), Postives = 45/76 (59.21%), Query Frame = 1
Query: 202 EKHRLEKLAGLPEEPPAGEADLVACVVRTGTG-RLARRFRRSDRLQVLFDFVEAGGA-PAGRYRLVTQFPRRALEV 423
EK K LP EPP G+ + VVR G R RRF ++D+LQ+LFDF++ GA G YR+V +PRRA +
Sbjct: 15 EKKLDTKKIMLPNEPPLGDEKAITIVVRMPDGGRCERRFFKTDKLQLLFDFIDISGAVEPGTYRVVKSYPRRAYSI 90
BLAST of mRNA_P-wetherbeei_contig57962.1.1 vs. uniprot
Match: A0A8M8V2A9_SESIN (plant UBX domain-containing protein 8 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A8M8V2A9_SESIN) HSP 1 Score: 63.5 bits (153), Expect = 7.180e-9 Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 1
Query: 202 EKHRLEKLAGLPEEPPAGEADLVACVVRTGTG-RLARRFRRSDRLQVLFDFVEAGGA-PAGRYRLVTQFPRRAL 417
E+ K A LP+EP A + + V +VR G R RRFR+SD+LQ LFDF++ G A G YRLV +PRRA
Sbjct: 492 ERQLAAKEASLPQEPTADDENAVTLLVRMPDGNRRGRRFRKSDKLQYLFDFIDIGRAVKPGSYRLVRPYPRRAF 565
BLAST of mRNA_P-wetherbeei_contig57962.1.1 vs. uniprot
Match: UPI0002C2E3D8 (uncharacterized protein LOC101293230 isoform X1 n=2 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0002C2E3D8) HSP 1 Score: 62.4 bits (150), Expect = 1.730e-8 Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 190 PFDPEKHRLEKLAGLPEEPPAGEADLVACVVRTGTG-RLARRFRRSDRLQVLFDFVEAGGA-PAGRYRLVTQFPRRAL 417
P + E+ K A LP EP A + + V +VR G RL+ RFR+SD+LQ+LFDF++ G YR+V +PR A
Sbjct: 377 PMESERRLAAKTASLPSEPAADDENAVTLLVRMPNGSRLSHRFRKSDKLQLLFDFIDVSSVVEPGTYRVVRSYPRHAF 454
BLAST of mRNA_P-wetherbeei_contig57962.1.1 vs. uniprot
Match: A0A498KQH3_MALDO (UBX domain-containing protein n=9 Tax=Maleae TaxID=721813 RepID=A0A498KQH3_MALDO) HSP 1 Score: 62.0 bits (149), Expect = 2.400e-8 Identity = 36/80 (45.00%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 190 PFDPEKHRLEKLAGLPEEPPAGEADLVACVVRTGTG-RLARRFRRSDRLQVLFDFVEAGG-APAGRYRLVTQFPRRALEV 423
P + E K A LP EP + + V +VR G RL+RRF +SD+LQVLFDF++ G G YR+V +PRRA V
Sbjct: 412 PLELESRLAAKGASLPCEPAIDDQNAVTLLVRMPNGTRLSRRFNKSDKLQVLFDFIDVGREVKPGTYRVVRSYPRRAFTV 491
BLAST of mRNA_P-wetherbeei_contig57962.1.1 vs. uniprot
Match: A0A830DFY4_9LAMI (Fas-associated factor 2-a n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830DFY4_9LAMI) HSP 1 Score: 61.6 bits (148), Expect = 3.300e-8 Identity = 34/68 (50.00%), Postives = 42/68 (61.76%), Query Frame = 1
Query: 220 KLAGLPEEPPAGEADLVACVVRTGTG-RLARRFRRSDRLQVLFDFVEAG-GAPAGRYRLVTQFPRRAL 417
K A LP+EP + + V +VR G R RRFR+SD LQ LFDF++ G G G YRLV +PRRA
Sbjct: 457 KEASLPQEPTPDDENAVTLLVRMPDGNRRGRRFRKSDMLQYLFDFIDVGRGVKPGSYRLVRPYPRRAF 524 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57962.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57962.1.1 >prot_P-wetherbeei_contig57962.1.1 ID=prot_P-wetherbeei_contig57962.1.1|Name=mRNA_P-wetherbeei_contig57962.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp LERGEQERLQKRQCSAAAVAARRRRDLSEAEEAGRRRRRCRRRPSAMAAAback to top mRNA from alignment at P-wetherbeei_contig57962:1..491- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57962.1.1 ID=mRNA_P-wetherbeei_contig57962.1.1|Name=mRNA_P-wetherbeei_contig57962.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=491bp|location=Sequence derived from alignment at P-wetherbeei_contig57962:1..491- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57962:1..491- >mRNA_P-wetherbeei_contig57962.1.1 ID=mRNA_P-wetherbeei_contig57962.1.1|Name=mRNA_P-wetherbeei_contig57962.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig57962:1..491- (Phaeothamnion wetherbeei SAG_119_79)back to top |