mRNA_P-wetherbeei_contig57600.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A3D4ILI2_9BACT (DNA-binding response regulator n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D4ILI2_9BACT) HSP 1 Score: 222 bits (565), Expect = 2.040e-71 Identity = 114/132 (86.36%), Postives = 122/132 (92.42%), Query Frame = 1
Query: 4 NTKIILLSMHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 399
N KIILLSMHDEVHLVKEILKAG+NGYVLKKDT ELL AI +V+ GKV+LS+D+NK+LI NL NPDEGKLLTDREREI+KLIAKEYTNK IAEELFISERTVETHRKNIFKKT TNSLVGLIKFAYANNLI
Sbjct: 90 NIKIILLSMHDEVHLVKEILKAGINGYVLKKDTQHELLQAIKEVAAGKVFLSNDINKLLIVNLQNPDEGKLLTDREREIVKLIAKEYTNKQIAEELFISERTVETHRKNIFKKTGTNSLVGLIKFAYANNLI 221
BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A239F3X0_9BACT (Two component transcriptional regulator, LuxR family n=2 Tax=Ekhidna lutea TaxID=447679 RepID=A0A239F3X0_9BACT) HSP 1 Score: 211 bits (536), Expect = 4.900e-67 Identity = 106/133 (79.70%), Postives = 120/133 (90.23%), Query Frame = 1
Query: 1 PNTKIILLSMHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 399
PNTKII+LSMHDE HL+KEILK GV+GY+LKKD+H+EL+NA+ V NGKVYLSSDVN ML+ LN +E KLLTDREREILKLIAKE+TNK +AEELFISERTVETHRKNIF+KT TN+LVGLIKFAYANNLI
Sbjct: 87 PNTKIIVLSMHDEAHLIKEILKEGVDGYILKKDSHEELVNAVRAVKNGKVYLSSDVNTMLMKGLNGTEEQKLLTDREREILKLIAKEFTNKQMAEELFISERTVETHRKNIFRKTKTNNLVGLIKFAYANNLI 219
BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A401UAH1_9BACT (DNA-binding response regulator n=2 Tax=Chryseotalea sanaruensis TaxID=2482724 RepID=A0A401UAH1_9BACT) HSP 1 Score: 209 bits (533), Expect = 8.930e-67 Identity = 107/133 (80.45%), Postives = 120/133 (90.23%), Query Frame = 1
Query: 1 PNTKIILLSMHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 399
P KII+LSMHDEVHL KEILK GV+GYVLKKDT +ELL AI +V G+VYLSSD+NK+LI NL+NPDEG+LLT+REREI+KLIAKEY+NK IAE LFISERTVETHRKNIF+KT TNSLVGLIKFAYANNLI
Sbjct: 73 PGVKIIVLSMHDEVHLAKEILKGGVDGYVLKKDTQQELLKAIQEVRAGRVYLSSDINKLLIMNLDNPDEGRLLTEREREIVKLIAKEYSNKLIAEALFISERTVETHRKNIFRKTGTNSLVGLIKFAYANNLI 205
BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A7Y7EEF0_9BACT (Response regulator transcription factor n=1 Tax=Cytophagia bacterium TaxID=2026730 RepID=A0A7Y7EEF0_9BACT) HSP 1 Score: 206 bits (524), Expect = 2.870e-66 Identity = 105/133 (78.95%), Postives = 117/133 (87.97%), Query Frame = 1
Query: 1 PNTKIILLSMHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 399
P KII+LSMHDE HLVKEILK GVNGYVLKKDT ELL AI+ V GK+YLS+D+N ML+ +L PDEGKLLT REREIL+LI+KEYTN+DIAEELFISERTVETHRKNIF+KT TNS+VGLIKFAYANNLI
Sbjct: 12 PEIKIIVLSMHDESHLVKEILKEGVNGYVLKKDTKDELLEAIYSVRGGKMYLSNDINSMLVKSLYEPDEGKLLTSREREILQLISKEYTNRDIAEELFISERTVETHRKNIFRKTKTNSIVGLIKFAYANNLI 144
BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: S2DQZ8_INDAL (Receiver component of a two-component response regulator n=2 Tax=Cyclobacteriaceae TaxID=563798 RepID=S2DQZ8_INDAL) HSP 1 Score: 206 bits (525), Expect = 1.470e-65 Identity = 101/133 (75.94%), Postives = 121/133 (90.98%), Query Frame = 1
Query: 1 PNTKIILLSMHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 399
P+TKI++LSMHDE HLVKEILK GV+GYVLK D+H+ELL AI + NGK+YLS+D+N+++I +L PDE +LLTDREREILKLIAKE++NKDIAE+LFISERTVETHRKNIF+KT TN+LVGLIKFAYANNLI
Sbjct: 73 PDTKILMLSMHDETHLVKEILKEGVSGYVLKNDSHRELLQAIETIKNGKIYLSNDINRIIINSLQFPDEERLLTDREREILKLIAKEFSNKDIAEQLFISERTVETHRKNIFRKTKTNTLVGLIKFAYANNLI 205
BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A1N7JJW8_9BACT (Two component transcriptional regulator, LuxR family n=3 Tax=Belliella TaxID=232244 RepID=A0A1N7JJW8_9BACT) HSP 1 Score: 205 bits (522), Expect = 4.200e-65 Identity = 102/133 (76.69%), Postives = 121/133 (90.98%), Query Frame = 1
Query: 1 PNTKIILLSMHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 399
P TKII+LSMHDEVHLVKEILK G+NGY+LK D+HKELL+AI V GK+YLS+D+NK++I +L PDE ++LTDREREILKLIAKE++N+DIA++LFISERTVETHRKNIF+KT TNSLVGLIKFAYANNLI
Sbjct: 73 PITKIIMLSMHDEVHLVKEILKEGINGYILKNDSHKELLSAIAAVDAGKIYLSNDINKIIINSLQFPDEERMLTDREREILKLIAKEFSNRDIADQLFISERTVETHRKNIFRKTKTNSLVGLIKFAYANNLI 205
BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A1X7LFG0_9BACT (Two component transcriptional regulator, LuxR family n=2 Tax=Marivirga sericea TaxID=1028 RepID=A0A1X7LFG0_9BACT) HSP 1 Score: 205 bits (522), Expect = 4.480e-65 Identity = 103/133 (77.44%), Postives = 120/133 (90.23%), Query Frame = 1
Query: 1 PNTKIILLSMHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 399
P TKII+LS HDEVHLVKEILK GV GY+LKKDTH+EL++AI VS GK+++S+++N+ML+ +LN P+E KLLTDREREILKLIAKEYTNK IAE LFISERTVETHRKNIF+KT TNSLVGLIKF+YANNLI
Sbjct: 75 PQTKIIILSQHDEVHLVKEILKEGVQGYILKKDTHRELVSAITQVSRGKIFMSNEINQMLVESLNFPEEHKLLTDREREILKLIAKEYTNKMIAEALFISERTVETHRKNIFRKTKTNSLVGLIKFSYANNLI 207
BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: UPI00191CD0C6 (response regulator transcription factor n=1 Tax=Marivirga atlantica TaxID=1548457 RepID=UPI00191CD0C6) HSP 1 Score: 205 bits (521), Expect = 5.960e-65 Identity = 102/133 (76.69%), Postives = 119/133 (89.47%), Query Frame = 1
Query: 1 PNTKIILLSMHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 399
P KII+LS HDEVHLVKEILK GV GY+LKKDTHKEL++AIH +S GK+++SS++NK+L+ +L+ PDE +LLTDREREILKLIA+EYTNK IAE LFISERTVETHRKNIF+KT TNSLVGLIKF YANNLI
Sbjct: 73 PKIKIIVLSQHDEVHLVKEILKEGVQGYILKKDTHKELISAIHQISEGKMFMSSEINKLLVDSLSFPDEHRLLTDREREILKLIAQEYTNKMIAEALFISERTVETHRKNIFRKTKTNSLVGLIKFGYANNLI 205
BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A5E8AXZ2_9BACT (Two component transcriptional regulator, LuxR family n=2 Tax=Imperialibacter TaxID=1649461 RepID=A0A5E8AXZ2_9BACT) HSP 1 Score: 203 bits (517), Expect = 5.010e-64 Identity = 100/133 (75.19%), Postives = 117/133 (87.97%), Query Frame = 1
Query: 1 PNTKIILLSMHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 399
P KI+++SMHDE HLVKEILK G+ GY+LKKD+ KEL+ A+ + G+ YLS+++N +LI NL NPDEGKLLT+REREILKLIAKEYTNKDIAEELFISERTVETHRKNIF+KT TNSLVGLIKFAYANNL+
Sbjct: 96 PEVKILIMSMHDEGHLVKEILKEGIKGYLLKKDSQKELIAALDQIRAGRTYLSNEINTLLIQNLQNPDEGKLLTEREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFRKTKTNSLVGLIKFAYANNLV 228
BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Match: A0A2E8N3K1_9RICK (DNA-binding response regulator n=3 Tax=Bacteria TaxID=2 RepID=A0A2E8N3K1_9RICK) HSP 1 Score: 201 bits (510), Expect = 4.500e-63 Identity = 100/133 (75.19%), Postives = 117/133 (87.97%), Query Frame = 1
Query: 1 PNTKIILLSMHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMLITNLNNPDEGKLLTDREREILKLIAKEYTNKDIAEELFISERTVETHRKNIFKKTATNSLVGLIKFAYANNLI 399
P+ KI++LSMHDE HLVKEILK GV+GY++KKD+H EL+NAI+ + +GK YLSSDVN +LI LN E KLLTDREREILKLI+KE+TNK IAEELFISERTVETHRKNIF+KT TN+LVGLIK+AYANNLI
Sbjct: 88 PHIKILVLSMHDEAHLVKEILKEGVDGYLIKKDSHNELINAIYSIKSGKTYLSSDVNSILIKGLNGEGEQKLLTDREREILKLISKEFTNKQIAEELFISERTVETHRKNIFRKTGTNNLVGLIKYAYANNLI 220 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57600.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57600.1.1 >prot_P-wetherbeei_contig57600.1.1 ID=prot_P-wetherbeei_contig57600.1.1|Name=mRNA_P-wetherbeei_contig57600.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp MHDEVHLVKEILKAGVNGYVLKKDTHKELLNAIHDVSNGKVYLSSDVNKMback to top mRNA from alignment at P-wetherbeei_contig57600:107..508- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57600.1.1 ID=mRNA_P-wetherbeei_contig57600.1.1|Name=mRNA_P-wetherbeei_contig57600.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig57600:107..508- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57600:107..508- >mRNA_P-wetherbeei_contig57600.1.1 ID=mRNA_P-wetherbeei_contig57600.1.1|Name=mRNA_P-wetherbeei_contig57600.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig57600:107..508- (Phaeothamnion wetherbeei SAG_119_79)back to top |