prot_P-wetherbeei_contig57485.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig57485.1.1
Unique Nameprot_P-wetherbeei_contig57485.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length82
Homology
BLAST of mRNA_P-wetherbeei_contig57485.1.1 vs. uniprot
Match: A0A4R4MJB7_9ACTN (WYL domain-containing protein n=3 Tax=Actinomadura TaxID=1988 RepID=A0A4R4MJB7_9ACTN)

HSP 1 Score: 50.8 bits (120), Expect = 1.920e-5
Identity = 22/59 (37.29%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    3 IHAPCEAVKEFISPDLAVLDPIDRETTRLVSATESLEWFVWRLSSIPFPMRVIAPPDLA 61
            +H P E   E ++    VL+P+DR T RL +A++SL +   R++ +PF   ++ PP+LA
Sbjct:  247 LHVPAEEAAEHVTAWQGVLEPVDRRTCRLHTASDSLRFLAHRITLLPFGYTLLDPPELA 305          
BLAST of mRNA_P-wetherbeei_contig57485.1.1 vs. uniprot
Match: A0A4V2XT41_9ACTN (YafY family transcriptional regulator n=1 Tax=Micromonospora sp. KC213 TaxID=2530378 RepID=A0A4V2XT41_9ACTN)

HSP 1 Score: 50.4 bits (119), Expect = 2.620e-5
Identity = 25/68 (36.76%), Postives = 35/68 (51.47%), Query Frame = 0
Query:    3 IHAPCEAVKEFISPDLAVLDPIDRETTRLVSATESLEWFVWRLSSIPFPMRVIAPPDLAEAFRAFGDR 70
            +HA    V + +    A L+PID ++ RL S T++LEW  W L S+     V  PP+L    R  G R
Sbjct:  245 LHASVTQVADRLGTSTAGLEPIDADSCRLTSHTDTLEWLAWHLLSLGCEFEVHQPPELVAHLRDIGGR 312          
BLAST of mRNA_P-wetherbeei_contig57485.1.1 vs. uniprot
Match: A0A6H1W7H3_9MICO (YafY family transcriptional regulator n=2 Tax=unclassified Leifsonia TaxID=2663824 RepID=A0A6H1W7H3_9MICO)

HSP 1 Score: 49.7 bits (117), Expect = 4.850e-5
Identity = 25/68 (36.76%), Postives = 41/68 (60.29%), Query Frame = 0
Query:    3 IHAPCEAVKEFISPDLAVLDPIDRETTRLVSATESLEWFVWRLSSIPFPMRVIAPPDLAEAFRAFGDR 70
            +HAP   V+  I    A  + +D ETTR+  + +S EW ++ L++   P +VIAPP++ E  R +G+R
Sbjct:  245 VHAPVAQVESAIGR-WATAEAVDAETTRVHLSADSAEWALFGLAAADAPFQVIAPPEVVELARVWGER 311          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57485.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A4R4MJB7_9ACTN1.920e-537.29WYL domain-containing protein n=3 Tax=Actinomadura... [more]
A0A4V2XT41_9ACTN2.620e-536.76YafY family transcriptional regulator n=1 Tax=Micr... [more]
A0A6H1W7H3_9MICO4.850e-536.76YafY family transcriptional regulator n=2 Tax=uncl... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57485contigP-wetherbeei_contig57485:215..460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57485.1.1mRNA_P-wetherbeei_contig57485.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig57485 215..472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig57485.1.1 ID=prot_P-wetherbeei_contig57485.1.1|Name=mRNA_P-wetherbeei_contig57485.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=82bp
MEIHAPCEAVKEFISPDLAVLDPIDRETTRLVSATESLEWFVWRLSSIPF
PMRVIAPPDLAEAFRAFGDRMHAIAAASSPAP
back to top