mRNA_P-wetherbeei_contig573.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-wetherbeei_contig573.3.1
Unique Name	mRNA_P-wetherbeei_contig573.3.1
Type	mRNA
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)

Homology

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BLAST of mRNA_P-wetherbeei_contig573.3.1 vs. uniprot
Match: A0A835YUR3_9STRA (Cyclin-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUR3_9STRA)

HSP 1 Score: 280 bits (716), Expect = 4.070e-86
Identity = 134/209 (64.11%), Postives = 163/209 (77.99%), Query Frame = 2

Query:    2 QRFFYRRSLTRFDAMSVAMACTLLAVKIEEV--KKKARDVALVFYRMYQRRRGLPAADIDPDGPAVATLKSEMVRVEGYLLRDLGFGFYNIMDHPHKFILYYVPVLKLEGRAVQLAWNYLNDSLRTDLCLRHRSEVIACAAIYLAARAVGAVLPEQPPWWEVFKADMSEMGRISNAILALYMRPRRPWIEPLAHQSVFAPGGAIRALDP 622
            QRF+YR+SLT+FDA SVAM C LLA K+EE     + RDV +VF+RMY RRRGLP   ++  G   A LK+EM+RVE Y+L+DLGFGFYNIMDHPHKFILYYV VL  E  A Q  W+YLND+LRTDLCLR+R+EVIACAAIY+AARA+   LP+ PPWW +F A++ E+G+I NAILALY +P+  W+EPL   SVFAPGGA+R  DP
Sbjct:   62 QRFYYRKSLTKFDAFSVAMGCVLLAAKLEEAIGHTRVRDVVMVFHRMYLRRRGLPLEFLELGGTVYAELKTEMIRVERYVLKDLGFGFYNIMDHPHKFILYYVRVLGWELEATQRVWSYLNDALRTDLCLRYRAEVIACAAIYMAARALRLRLPQSPPWWRLFNAELPEIGQICNAILALYKKPKVVWLEPLHSGSVFAPGGAVRRCDP 270

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BLAST of mRNA_P-wetherbeei_contig573.3.1 vs. uniprot
Match: D7G8Q2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q2_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 7.300e-74
Identity = 128/206 (62.14%), Postives = 159/206 (77.18%), Query Frame = 2

Query:    2 QRFFYRRSLTRFDAMSVAMACTLLAVKIEEVKKKARDVALVFYRMYQRRRGL-PAADIDPDGPAVATLKSEMVRVEGYLLRDLGFGFYNIMDHPHKFILYYVPVLKL--EGRAVQLAWNYLNDSLRTDLCLRHRSEVIACAAIYLAARAVGAVLPEQPPWWEVFKADMSEMGRISNAILALYMRPRRPWIEPLAHQSVFAPGGAIR 610
            QRFFYR+ LT+FDA SVAM C LLA+KIEE  ++ R V LVF+RM++RR G+ PA  I P+  ++  L+ EM+RVE ++L++LGFGFYNIMDHPHKFILYY+ VL+L  EG   Q AWNY+NDSLRTDL LR RSEVIACAAIY+A+R++G  LP+ PPWW +F ADM EMG I N ILALY RP+  ++EPL   SVF  GG +R
Sbjct:  120 QRFFYRKPLTKFDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVDPAIVIPPE--SLRVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPKVAFLEPLCDNSVFRRGGPLR 323

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BLAST of mRNA_P-wetherbeei_contig573.3.1 vs. uniprot
Match: A0A7S4D4U7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4U7_HETAK)

HSP 1 Score: 229 bits (584), Expect = 1.370e-66
Identity = 106/199 (53.27%), Postives = 139/199 (69.85%), Query Frame = 2

Query:    2 QRFFYRRSLTRFDAMSVAMACTLLAVKIEEVKKKARDVALVFYRMYQRRRGLPAADIDPDGPAVATLKSEMVRVEGYLLRDLGFGFYNIMDHPHKFILYYVPVLKLEGRAVQLAWNYLNDSLRTDLCLRHRSEVIACAAIYLAARAVGAVLPEQPPWWEVFKADMSEMGRISNAILALYMRPRRPWIEPLAHQSVFAPG 598
            QRFFYRRSL RFDA +VAM C  L+ K+EE  K+ R++  VF+ + Q RRG P   ++         KSE++++E ++L++LGF FYNIMDHPHKFILYY+ VL       Q AW+Y+NDSLRTDLCLRH + VIACAAIY+AAR +   LP  PPWWE+F A + ++  I +AILALY   + PW+EPL+  +VF  G
Sbjct:   94 QRFFYRRSLKRFDAFTVAMGCLFLSCKVEEKPKRLREILFVFHHISQVRRGEPITPLELGAQTYMQWKSELIKMERHVLKELGFSFYNIMDHPHKFILYYIKVLDGSSALAQRAWSYVNDSLRTDLCLRHGAAVIACAAIYMAARVLRVPLPRSPPWWELFSAQLRDVAAICDAILALYEMEKTPWMEPLSEANVFKRG 292

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BLAST of mRNA_P-wetherbeei_contig573.3.1 vs. uniprot
Match: A0A6A3UY25_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UY25_9STRA)

HSP 1 Score: 197 bits (500), Expect = 5.520e-55
Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 2

Query:    2 QRFFYRRSLTRFDAMSVAMACTLLAVKIEEVKKKARDVALVFYRMYQRRR----GLPAADIDPDGPAVATLKSEMVRVEGYLLRDLGFGFYNIMDHPHKFILYYVPVLKLEGRAVQLAWNYLNDSLRTDLCLRHRSEVIACAAIYLAARAVGAVLPEQPPWWEVFKADMSEMGRISNAILALYMRPRRPWIEPLAHQSVFA 592
            QRFFYR+SL +FDA  VA++C  LA K+EE  K+ RDV  VFY M +RR+     +    +D DG   A  +  ++ VE  +L DLGF  YN+  HPHKF+LYYV VL    +  Q AW Y+NDSLR DLC+R+ ++VIACAAI+LA+R     LPE+PPW+ +F  D +++  +S AI+ LY + R  W+EPL   + FA
Sbjct:   65 QRFFYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIRDVLAVFYAMLRRRKWKRSSVAQQLVDVDGATFAQWRMWLIMVERQVLIDLGFSVYNVAQHPHKFVLYYVKVLDGSPQLAQQAWGYINDSLRADLCVRYSAQVIACAAIFLASRFQHVALPERPPWYALFDVDKTQLYAVSVAIMELYKQERIEWLEPLTDTNPFA 265

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BLAST of mRNA_P-wetherbeei_contig573.3.1 vs. uniprot
Match: A0A6A3KUB7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3KUB7_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.390e-53
Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 2

Query:    2 QRFFYRRSLTRFDAMSVAMACTLLAVKIEEVKKKARDVALVFYRMYQRRR----GLPAADIDPDGPAVATLKSEMVRVEGYLLRDLGFGFYNIMDHPHKFILYYVPVLKLEGRAVQLAWNYLNDSLRTDLCLRHRSEVIACAAIYLAARAVGAVLPEQPPWWEVFKADMSEMGRISNAILALYMRPRRPWIEPLAHQSVFA 592
            QRFFYR+SL +FDA  VA++C  LA K+EE  K+ RDV  VFY M +RR+     +    +D DG   A  +  ++ VE  +L DLGF  YN+  HPHKF+LYYV VL    +  Q AW Y+NDSLR DLC+R+ ++VIACAAI+LA+R     LPE+PPW+ +F  D +++  +S AI+ LY + R  W+EPL   + FA
Sbjct:   65 QRFFYRQSLRQFDAFRVAVSCLFLAAKVEEKPKRIRDVLAVFYAMLRRRKWKRSSVAQQLVDVDGATFAQWRMWLIMVERQVLIDLGFSVYNVAQHPHKFVLYYVKVLDGSPQLAQQAWGYINDSLRADLCVRYSAQVIACAAIFLASRFQHVALPERPPWYALFDVDKTQLYAVSVAIMELYKQERIEWLEPLTDTNPFA 265

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BLAST of mRNA_P-wetherbeei_contig573.3.1 vs. uniprot
Match: G5AHC4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AHC4_PHYSP)

HSP 1 Score: 196 bits (499), Expect = 1.530e-53
Identity = 96/201 (47.76%), Postives = 133/201 (66.17%), Query Frame = 2

Query:    2 QRFFYRRSLTRFDAMSVAMACTLLAVKIEEVKKKARDVALVFYRMYQRR--RGLPAAD--IDPDGPAVATLKSEMVRVEGYLLRDLGFGFYNIMDHPHKFILYYVPVLKLEGRAVQLAWNYLNDSLRTDLCLRHRSEVIACAAIYLAARAVGAVLPEQPPWWEVFKADMSEMGRISNAILALYMRPRRPWIEPLAHQSVFA 592
            QRF+YR+SL +FDA  VA++C  LA K+EE  K+ RDV  VFY M +RR  R    A   +D +G   A  +  ++ VE  +L DLGF  YN+  HPHKF+LYYV VL    +  Q AW Y+NDSLR DLC+R+ ++VIACAAI+LA+R     LPE+PPW+++F  D +++  +S AI+ LY +P+  W+EPL   + FA
Sbjct:   64 QRFYYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIRDVLSVFYAMLRRRKWRRTTVAQQLVDLEGATFAQWRMWLIMVERQVLIDLGFSVYNVAQHPHKFVLYYVKVLDGSPQLAQQAWGYINDSLRADLCVRYSAQVIACAAIFLASRFQRVALPERPPWYQLFDVDQAQLYAVSVAIMELYKQPKIEWLEPLTETNPFA 264

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BLAST of mRNA_P-wetherbeei_contig573.3.1 vs. uniprot
Match: A0A225WJ87_9STRA (Cyclin-L1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WJ87_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.540e-53
Identity = 91/200 (45.50%), Postives = 132/200 (66.00%), Query Frame = 2

Query:    5 RFFYRRSLTRFDAMSVAMACTLLAVKIEEVKKKARDVALVFYRMYQRRRG----LPAADIDPDGPAVATLKSEMVRVEGYLLRDLGFGFYNIMDHPHKFILYYVPVLKLEGRAVQLAWNYLNDSLRTDLCLRHRSEVIACAAIYLAARAVGAVLPEQPPWWEVFKADMSEMGRISNAILALYMRPRRPWIEPLAHQSVFA 592
            RF+YR+SL +FDA  VA++C  LA K+EE  K+ +DV  VFY M +RR+     +    +D DG   +  +  ++ VE  +L DLGF  YN+ +HPHK++LYYV VL       Q AW Y+NDSLRTDLC+R++++VIACAAI+LA+R  G  LPE PPW+ +F  + +++  +S AI+ LY + +  W+EPL   + FA
Sbjct:   64 RFYYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIKDVLGVFYAMLRRRKWRRTTVTQQLVDVDGATFSQWRMWLIMVERQVLIDLGFSVYNVTEHPHKYVLYYVKVLDGSSTLAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYSLFDVEKTQLYAVSVAIMQLYKQEKVEWLEPLTETNPFA 263

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BLAST of mRNA_P-wetherbeei_contig573.3.1 vs. uniprot
Match: A0A0P1B0R9_PLAHL (Ania-6a type cyclin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0R9_PLAHL)

HSP 1 Score: 194 bits (494), Expect = 3.420e-53
Identity = 91/200 (45.50%), Postives = 132/200 (66.00%), Query Frame = 2

Query:    2 QRFFYRRSLTRFDAMSVAMACTLLAVKIEEVKKKARDVALVFYRMYQRRRG----LPAADIDPDGPAVATLKSEMVRVEGYLLRDLGFGFYNIMDHPHKFILYYVPVLKLEGRAVQLAWNYLNDSLRTDLCLRHRSEVIACAAIYLAARAVGAVLPEQPPWWEVFKADMSEMGRISNAILALYMRPRRPWIEPLAHQSVF 589
            QRFFYR+SL +FDA  VA++C  LA K+EE  K+ +DV  VFY MY+RR+     +    +D DG   +  +  ++ VE  +L DLGF  Y+I +HPHK++LYYV VL       Q AW Y+NDSLRTDLC+R++++ IACAAI+LA+R +   LPE PPW+++F  + S++  +S  I+ LY + +  W+EPL   + F
Sbjct:   65 QRFFYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIKDVVSVFYAMYRRRKWHCSTVAQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSITEHPHKYVLYYVKVLDGRSALAQQAWGYINDSLRTDLCVRYKAQAIACAAIFLASRFLKVALPENPPWYKLFDVNKSQLYAVSIVIMGLYKQEKLQWVEPLTEANPF 264

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BLAST of mRNA_P-wetherbeei_contig573.3.1 vs. uniprot
Match: A0A3F2S4S2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S4S2_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.190e-52
Identity = 89/201 (44.28%), Postives = 132/201 (65.67%), Query Frame = 2

Query:    2 QRFFYRRSLTRFDAMSVAMACTLLAVKIEEVKKKARDVALVFYRMYQRRRG----LPAADIDPDGPAVATLKSEMVRVEGYLLRDLGFGFYNIMDHPHKFILYYVPVLKLEGRAVQLAWNYLNDSLRTDLCLRHRSEVIACAAIYLAARAVGAVLPEQPPWWEVFKADMSEMGRISNAILALYMRPRRPWIEPLAHQSVFA 592
            QRF+YR+SL +FDA  VA++C  LA K+EE  K+ +DV  VFY M +RR+     +    +D DG   +  +  ++ VE  +L D+GF  YN+ +HPHK++LYYV VL    +  Q AW Y+NDSLR+DLC+R+ ++VIAC+AI+LA+R  G  LPE PPW+ +F  +  ++  +S AI+ LY + +  W+EPL   + FA
Sbjct:   64 QRFYYRKSLRQFDAFRVAISCLFLAAKVEERPKRIKDVLTVFYAMLRRRKWKRTVVSQQLVDLDGATYSQWRMWLIMVERQVLIDMGFSVYNVTEHPHKYVLYYVKVLDGSSQLAQRAWGYINDSLRSDLCVRYSAQVIACSAIFLASRYQGVALPENPPWYSLFGVNKQQLYAVSVAIMELYKQEKIEWLEPLTETNPFA 264

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BLAST of mRNA_P-wetherbeei_contig573.3.1 vs. uniprot
Match: W2R3U0_PHYPN (Uncharacterized protein (Fragment) n=11 Tax=Phytophthora TaxID=4783 RepID=W2R3U0_PHYPN)

HSP 1 Score: 192 bits (488), Expect = 2.400e-52
Identity = 90/200 (45.00%), Postives = 132/200 (66.00%), Query Frame = 2

Query:    2 QRFFYRRSLTRFDAMSVAMACTLLAVKIEEVKKKARDVALVFYRMYQRRRGLPAAD----IDPDGPAVATLKSEMVRVEGYLLRDLGFGFYNIMDHPHKFILYYVPVLKLEGRAVQLAWNYLNDSLRTDLCLRHRSEVIACAAIYLAARAVGAVLPEQPPWWEVFKADMSEMGRISNAILALYMRPRRPWIEPLAHQSVF 589
            QRF+YR+SL +FDA  VA++C  LA K+EE  K+ +DV  VFY M++RR+   +      +D DG   +  +  ++ VE  +L DLGF  Y++ +HPHK++LYYV VL       Q AW Y+NDSLRTDLC+R++++VIACAAI+LA+R  G  LPE PPW+ +F  D +++  +S  I+ LY + +  W+EPL   + F
Sbjct:   65 QRFYYRKSLRQFDAFRVAVSCLFLAAKVEEKPKRIKDVVGVFYAMFRRRKWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVLDGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYLLFDVDKTQLYAVSVVIMELYKQEKIQWLEPLTETNPF 264

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig573.3.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig573.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YUR3_9STRA	4.070e-86	64.11	Cyclin-like protein (Fragment) n=1 Tax=Tribonema m...	[more]
D7G8Q2_ECTSI	7.300e-74	62.14	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S4D4U7_HETAK	1.370e-66	53.27	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A6A3UY25_9STRA	5.520e-55	47.76	Uncharacterized protein n=4 Tax=Phytophthora TaxID...	[more]
A0A6A3KUB7_9STRA	1.390e-53	47.76	Uncharacterized protein n=1 Tax=Phytophthora rubi ...	[more]
G5AHC4_PHYSP	1.530e-53	47.76	Uncharacterized protein n=1 Tax=Phytophthora sojae...	[more]
A0A225WJ87_9STRA	1.540e-53	45.50	Cyclin-L1 n=1 Tax=Phytophthora megakarya TaxID=479...	[more]
A0A0P1B0R9_PLAHL	3.420e-53	45.50	Ania-6a type cyclin n=1 Tax=Plasmopara halstedii T...	[more]
A0A3F2S4S2_9STRA	2.190e-52	44.28	Uncharacterized protein n=3 Tax=Phytophthora kerno...	[more]
W2R3U0_PHYPN	2.400e-52	45.00	Uncharacterized protein (Fragment) n=11 Tax=Phytop...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig573	contig	P-wetherbeei_contig573:7099..8729 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7G8Q2
PFAMs	Cyclin_N
Model size	1631
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	other localisation
Exons	1
Evalue	3.23e-65
EggNOG OGs	COG5333@1\|root,KOG0835@2759\|Eukaryota
Description	positive regulation of phosphorylation of RNA polymerase II C-terminal domain
Cds size	1575
COG category	DKL

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186850.1082199-UTR-P-wetherbeei_contig573:7098..7141	1683186850.1082199-UTR-P-wetherbeei_contig573:7098..7141	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig573 7099..7141 +
1683186850.1399794-UTR-P-wetherbeei_contig573:8716..8729	1683186850.1399794-UTR-P-wetherbeei_contig573:8716..8729	Phaeothamnion wetherbeei SAG_119_79	UTR	P-wetherbeei_contig573 8717..8729 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1683186850.1176744-CDS-P-wetherbeei_contig573:7141..8716	1683186850.1176744-CDS-P-wetherbeei_contig573:7141..8716	Phaeothamnion wetherbeei SAG_119_79	CDS	P-wetherbeei_contig573 7142..8716 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig573.3.1	prot_P-wetherbeei_contig573.3.1	Phaeothamnion wetherbeei SAG_119_79	polypeptide	P-wetherbeei_contig573 7142..8716 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-wetherbeei_contig573:7099..8729+
coding sequence from alignment at P-wetherbeei_contig573:7099..8729+

protein sequence of mRNA_P-wetherbeei_contig573.3.1

>prot_P-wetherbeei_contig573.3.1 ID=prot_P-wetherbeei_contig573.3.1|Name=mRNA_P-wetherbeei_contig573.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=525bp
MSVAMACTLLAVKIEEVKKKARDVALVFYRMYQRRRGLPAADIDPDGPAV
ATLKSEMVRVEGYLLRDLGFGFYNIMDHPHKFILYYVPVLKLEGRAVQLA
WNYLNDSLRTDLCLRHRSEVIACAAIYLAARAVGAVLPEQPPWWEVFKAD
MSEMGRISNAILALYMRPRRPWIEPLAHQSVFAPGGAIRALDPAAVSILD
CPLAVTTSPFILAAIADAGDAAGDGGGDGDGGIGSGNDCYSAASPPLPGE
GLAPPGSPTAPRINGLGSPSSDFVGGDSGGGGGSGLKGALDTAVIAKEAG
AIGSGERPEELAGSATADCEQARSRDGGGGGRESSNAATGADARERGGGG
RDHGGGRRRSDGSSDRRGRDRGSNRDRDRGSDRDRGSDRGGGDSGGGGGD
RGGGRGGAGGGETAGDGSNGGERRAADWDPQQRDRGSTGDGSRQRRRSRS
RSRSRDRERERECSRGSAPGGRQDRGRGGRWQQPAPQSGERQGRDRRQSG
GGGGGGRQGRQGRGEAGGDKRAHG*

mRNA from alignment at P-wetherbeei_contig573:7099..8729+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-wetherbeei_contig573.3.1 ID=mRNA_P-wetherbeei_contig573.3.1|Name=mRNA_P-wetherbeei_contig573.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1631bp|location=Sequence derived from alignment at P-wetherbeei_contig573:7099..8729+ (Phaeothamnion wetherbeei SAG_119_79)
GCAGCGCTTCTTCTATCGGCGCTCGCTGACACGTTTCGACGCCATGTCGG
TCGCCATGGCCTGCACGCTCCTCGCCGTCAAAATCGAAGAGGTAAAAAAG
AAGGCCCGCGACGTCGCCCTCGTCTTCTACCGCATGTACCAGCGCCGCCG
CGGCCTCCCGGCGGCCGACATTGACCCGGACGGCCCCGCTGTCGCCACAT
TGAAGTCCGAAATGGTCCGCGTCGAGGGCTACCTCCTGCGGGACCTCGGC
TTTGGCTTTTACAACATCATGGACCACCCGCACAAGTTCATCCTCTACTA
CGTCCCCGTTTTGAAGCTGGAGGGTCGCGCCGTCCAGCTGGCCTGGAACT
ACCTCAACGACTCGCTGCGCACCGATTTGTGTCTGCGTCACCGCTCCGAG
GTCATCGCATGCGCCGCCATATACCTGGCTGCCCGCGCTGTTGGTGCCGT
GCTGCCAGAGCAGCCGCCGTGGTGGGAGGTCTTCAAGGCGGACATGTCGG
AGATGGGACGAATCTCCAACGCTATTTTGGCGCTGTACATGCGGCCGCGG
CGGCCGTGGATCGAACCGCTGGCGCATCAGAGTGTCTTTGCGCCAGGCGG
CGCCATCCGTGCACTTGACCCGGCGGCTGTGTCAATATTAGATTGCCCGT
TGGCGGTGACGACATCTCCGTTCATTCTCGCTGCTATCGCCGATGCCGGC
GACGCGGCTGGGGACGGCGGCGGCGACGGCGATGGTGGAATTGGCAGCGG
CAATGACTGTTATTCGGCGGCGTCACCGCCGCTGCCGGGAGAGGGGCTGG
CGCCGCCAGGGAGTCCAACGGCGCCTCGGATCAACGGGCTCGGCAGCCCG
AGCAGCGACTTTGTGGGTGGTGACAGCGGCGGTGGTGGCGGCAGCGGCCT
CAAAGGAGCCCTGGACACGGCGGTGATCGCAAAGGAGGCGGGCGCGATTG
GCAGCGGAGAGCGGCCGGAGGAGCTGGCTGGAAGCGCCACTGCCGACTGC
GAGCAGGCACGTTCCCGCGACGGAGGCGGCGGCGGCAGGGAAAGTTCGAA
TGCTGCAACCGGAGCCGACGCCAGAGAGCGAGGAGGAGGAGGCAGGGATC
ACGGAGGCGGCCGCCGCAGGAGTGACGGCAGCAGCGACCGCCGCGGTCGC
GACCGCGGCAGCAATCGTGACCGTGACCGCGGCAGTGACCGTGATCGCGG
TAGCGACCGTGGTGGCGGCGACAGTGGCGGCGGCGGTGGCGACCGCGGCG
GCGGTAGAGGCGGCGCCGGCGGCGGAGAGACGGCGGGGGATGGGTCGAAC
GGAGGGGAGAGGCGTGCGGCGGACTGGGATCCGCAGCAGCGCGACCGTGG
CAGCACTGGCGACGGCTCTCGGCAACGGCGTCGCAGCCGCAGCCGTAGCC
GTAGCCGCGACCGGGAGCGAGAGCGGGAGTGCAGCCGCGGGTCGGCGCCC
GGCGGACGGCAGGATCGGGGCCGCGGCGGCAGGTGGCAGCAGCCGGCGCC
GCAGAGCGGAGAGCGGCAGGGCCGGGACCGAAGGCAGAGCGGCGGCGGCG
GCGGCGGCGGCCGGCAAGGGCGGCAGGGCCGCGGCGAGGCCGGAGGTGAT
AAGCGGGCTCATGGCTAATCTTATCGGCGAA

Coding sequence (CDS) from alignment at P-wetherbeei_contig573:7099..8729+

>mRNA_P-wetherbeei_contig573.3.1 ID=mRNA_P-wetherbeei_contig573.3.1|Name=mRNA_P-wetherbeei_contig573.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1575bp|location=Sequence derived from alignment at P-wetherbeei_contig573:7099..8729+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGGTCGCCATGGCCTGCACGCTCCTCGCCGTCAAAATCGAAGAGGT
AAAAAAGAAGGCCCGCGACGTCGCCCTCGTCTTCTACCGCATGTACCAGC
GCCGCCGCGGCCTCCCGGCGGCCGACATTGACCCGGACGGCCCCGCTGTC
GCCACATTGAAGTCCGAAATGGTCCGCGTCGAGGGCTACCTCCTGCGGGA
CCTCGGCTTTGGCTTTTACAACATCATGGACCACCCGCACAAGTTCATCC
TCTACTACGTCCCCGTTTTGAAGCTGGAGGGTCGCGCCGTCCAGCTGGCC
TGGAACTACCTCAACGACTCGCTGCGCACCGATTTGTGTCTGCGTCACCG
CTCCGAGGTCATCGCATGCGCCGCCATATACCTGGCTGCCCGCGCTGTTG
GTGCCGTGCTGCCAGAGCAGCCGCCGTGGTGGGAGGTCTTCAAGGCGGAC
ATGTCGGAGATGGGACGAATCTCCAACGCTATTTTGGCGCTGTACATGCG
GCCGCGGCGGCCGTGGATCGAACCGCTGGCGCATCAGAGTGTCTTTGCGC
CAGGCGGCGCCATCCGTGCACTTGACCCGGCGGCTGTGTCAATATTAGAT
TGCCCGTTGGCGGTGACGACATCTCCGTTCATTCTCGCTGCTATCGCCGA
TGCCGGCGACGCGGCTGGGGACGGCGGCGGCGACGGCGATGGTGGAATTG
GCAGCGGCAATGACTGTTATTCGGCGGCGTCACCGCCGCTGCCGGGAGAG
GGGCTGGCGCCGCCAGGGAGTCCAACGGCGCCTCGGATCAACGGGCTCGG
CAGCCCGAGCAGCGACTTTGTGGGTGGTGACAGCGGCGGTGGTGGCGGCA
GCGGCCTCAAAGGAGCCCTGGACACGGCGGTGATCGCAAAGGAGGCGGGC
GCGATTGGCAGCGGAGAGCGGCCGGAGGAGCTGGCTGGAAGCGCCACTGC
CGACTGCGAGCAGGCACGTTCCCGCGACGGAGGCGGCGGCGGCAGGGAAA
GTTCGAATGCTGCAACCGGAGCCGACGCCAGAGAGCGAGGAGGAGGAGGC
AGGGATCACGGAGGCGGCCGCCGCAGGAGTGACGGCAGCAGCGACCGCCG
CGGTCGCGACCGCGGCAGCAATCGTGACCGTGACCGCGGCAGTGACCGTG
ATCGCGGTAGCGACCGTGGTGGCGGCGACAGTGGCGGCGGCGGTGGCGAC
CGCGGCGGCGGTAGAGGCGGCGCCGGCGGCGGAGAGACGGCGGGGGATGG
GTCGAACGGAGGGGAGAGGCGTGCGGCGGACTGGGATCCGCAGCAGCGCG
ACCGTGGCAGCACTGGCGACGGCTCTCGGCAACGGCGTCGCAGCCGCAGC
CGTAGCCGTAGCCGCGACCGGGAGCGAGAGCGGGAGTGCAGCCGCGGGTC
GGCGCCCGGCGGACGGCAGGATCGGGGCCGCGGCGGCAGGTGGCAGCAGC
CGGCGCCGCAGAGCGGAGAGCGGCAGGGCCGGGACCGAAGGCAGAGCGGC
GGCGGCGGCGGCGGCGGCCGGCAAGGGCGGCAGGGCCGCGGCGAGGCCGG
AGGTGATAAGCGGGCTCATGGCTAA