mRNA_P-wetherbeei_contig5716.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A536U624_9PROT (Peptide deformylase n=7 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536U624_9PROT) HSP 1 Score: 285 bits (728), Expect = 2.430e-93 Identity = 134/176 (76.14%), Postives = 148/176 (84.09%), Query Frame = 1
Query: 520 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 1047
MIREVLKMGD RLL +RPV FGTP+L+ L+ADMRDTMAH+NGAGLAAPQIGV LRVVIFG NPRYPDAE+VP TVLINP+I L DEMEEGWEGCLSVPG+RGVVPR+ RLRY GFD G IDR EGFHARVVQHECDHLDGILYPMR+ D ++FGF E LFP QE+ D+
Sbjct: 1 MIREVLKMGDPRLLEKSRPVEAFGTPQLRGLIADMRDTMAHLNGAGLAAPQIGVPLRVVIFGLTRNPRYPDAEEVPHTVLINPVITPLDDEMEEGWEGCLSVPGMRGVVPRFKRLRYTGFDESGKPIDRSVEGFHARVVQHECDHLDGILYPMRIRDMSKFGFAEVLFPDQELIDE 176
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A5C7L3Z4_9GAMM (Peptide deformylase n=1 Tax=Sinobacteraceae bacterium TaxID=1969813 RepID=A0A5C7L3Z4_9GAMM) HSP 1 Score: 283 bits (723), Expect = 1.390e-92 Identity = 135/176 (76.70%), Postives = 148/176 (84.09%), Query Frame = 1
Query: 520 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 1047
MIR+VL+MGD RLL VA PVA F TPEL AL+ADM DTM H+NGAGLAAPQIGV+LRVVIFG +PRYPDAE VP TVLINP I+F+ DEME+GWEGCLSVPGLRGVVPR+ RLRYRGFDA G IDR FHARVVQHECDHLDGILYPMRV DF+RFGF + LFPG + ADD
Sbjct: 1 MIRDVLRMGDPRLLRVAEPVAAFDTPELHALIADMFDTMRHLNGAGLAAPQIGVNLRVVIFGFGSSPRYPDAEPVPETVLINPQIDFIGDEMEDGWEGCLSVPGLRGVVPRHRRLRYRGFDASGRPIDRTVGDFHARVVQHECDHLDGILYPMRVRDFSRFGFTDVLFPGLQDADD 176
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A1F4C5Y9_9PROT (Peptide deformylase n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4C5Y9_9PROT) HSP 1 Score: 281 bits (718), Expect = 7.980e-92 Identity = 131/176 (74.43%), Postives = 152/176 (86.36%), Query Frame = 1
Query: 520 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 1047
MIREVLKMGD RLL A+P+ QF TPEL ALLAD+RDTMAH+NGAGLAAPQIGV L+VVIFG NPRYP ED+P TVLINP++ LSDE+EE WEGCLS+PGLRG+VPR+ARLRY+GFD GN IDR +GFHARVVQHECDHL GILYPMR+ DF++FGFI+ALFPG++V D+
Sbjct: 1 MIREVLKMGDPRLLQQAQPLQQFDTPELHALLADLRDTMAHLNGAGLAAPQIGVGLQVVIFGVEQNPRYPQVEDIPDTVLINPVLTPLSDELEEDWEGCLSLPGLRGMVPRHARLRYQGFDEKGNPIDRSVDGFHARVVQHECDHLLGILYPMRIRDFSKFGFIQALFPGEDVIDE 176
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: UPI000486D17F (peptide deformylase n=1 Tax=Solimonas soli TaxID=413479 RepID=UPI000486D17F) HSP 1 Score: 280 bits (716), Expect = 1.600e-91 Identity = 131/176 (74.43%), Postives = 150/176 (85.23%), Query Frame = 1
Query: 520 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 1047
MIR+VLKMGD RLL +A PV F TPEL+AL+ D+ DTM H+NGAGLAAPQIGV+LRVVIFG N RYPDA VP T+L+NP++ LSDEME+GWEGCLSVPGLRGVVPR+ RLRY+GFD +G IDRV+EGFHARVVQHECDHLDGILYPMR+ DFTRFGF + LFPGQ +ADD
Sbjct: 1 MIRDVLKMGDARLLRIAEPVRAFATPELRALVGDLFDTMRHLNGAGLAAPQIGVNLRVVIFGFAANARYPDAPPVPETILVNPVLTPLSDEMEDGWEGCLSVPGLRGVVPRHRRLRYQGFDMEGAPIDRVSEGFHARVVQHECDHLDGILYPMRIRDFTRFGFQDVLFPGQALADD 176
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A2N2TTS4_9PROT (Peptide deformylase n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-14 TaxID=2013705 RepID=A0A2N2TTS4_9PROT) HSP 1 Score: 278 bits (711), Expect = 9.180e-91 Identity = 129/176 (73.30%), Postives = 148/176 (84.09%), Query Frame = 1
Query: 520 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 1047
MIRE+LKMGD RLL +RPV +GTPEL AL+ DM+DTM NGAGLAAPQIGV LRVVIFG NPRYP AE VPFT+L+NP++ LSDE+EEGWEGCLSVPGLRGVVPR+ARL YRGFDADG+ I+R A GFHARVVQHECDHLDGILYPMR+ DFTRFG+ + LFP ++ +D
Sbjct: 1 MIREILKMGDPRLLQASRPVEAYGTPELHALIGDMQDTMRAANGAGLAAPQIGVGLRVVIFGFESNPRYPQAEAVPFTILVNPVLTPLSDELEEGWEGCLSVPGLRGVVPRWARLVYRGFDADGSLIEREATGFHARVVQHECDHLDGILYPMRIRDFTRFGYTDVLFPDADIPED 176
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A1F4DLF8_9PROT (Peptide deformylase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4DLF8_9PROT) HSP 1 Score: 278 bits (711), Expect = 9.180e-91 Identity = 129/176 (73.30%), Postives = 150/176 (85.23%), Query Frame = 1
Query: 520 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 1047
MIREVL+MGD RL+ V+R V F TP+L AL+ DMR+TM H+NGAGLAAPQIGV LRVVIFG + NPRYPDAE+VP TVLINP+++ + DE+E+GWEGCLSVPGLRGVVPR+ RLRY GFDA G I+R EGFHARVVQHECDHLDGILYPMR+ DF++FGF + LFPGQEV DD
Sbjct: 1 MIREVLRMGDPRLVQVSRLVETFDTPDLHALIEDMRETMQHLNGAGLAAPQIGVLLRVVIFGVHANPRYPDAEEVPDTVLINPVLDPIGDEIEDGWEGCLSVPGLRGVVPRFRRLRYSGFDARGERIERTVEGFHARVVQHECDHLDGILYPMRIRDFSQFGFTDVLFPGQEVQDD 176
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: I8TDY7_9GAMM (Peptide deformylase n=1 Tax=Hydrocarboniphaga effusa AP103 TaxID=1172194 RepID=I8TDY7_9GAMM) HSP 1 Score: 277 bits (708), Expect = 2.620e-90 Identity = 132/176 (75.00%), Postives = 148/176 (84.09%), Query Frame = 1
Query: 520 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 1047
MIR VL+MGD RLL V+RPV +FGTPEL+ L+ADM DTM +NGAGLAAPQIGV LRVVIFG +PRYP+A+ VP T+LINP++ LSDE EEGWEGCLSVPGLRGVVPRY RLRY GFD G+ IDR +GFHARVVQHECDHLDGILYPMRV DFTRFGF E LFPGQ++ DD
Sbjct: 1 MIRPVLRMGDARLLRVSRPVERFGTPELRELVADMFDTMRALNGAGLAAPQIGVDLRVVIFGFTSSPRYPNAQAVPETILINPVLTPLSDEQEEGWEGCLSVPGLRGVVPRYQRLRYTGFDLHGDVIDRNVDGFHARVVQHECDHLDGILYPMRVRDFTRFGFNEELFPGQQINDD 176
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A1Y0BAL2_9BACT (Peptide deformylase n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1Y0BAL2_9BACT) HSP 1 Score: 276 bits (707), Expect = 3.840e-90 Identity = 132/171 (77.19%), Postives = 142/171 (83.04%), Query Frame = 1
Query: 520 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQ 1032
MIREVL+MGD RLL ARPV +FGTPEL ALLADMRDTMAH+NGAGLAAPQIGV LRVVIFG NPRYP E+VP TVLINP IE L +EMEE WEGCLSVPG+RG VPRY RLRY GFD G I+R A FHARVVQHECDHLDGILYPMR+ DF +FGF EALFPG+
Sbjct: 1 MIREVLRMGDPRLLQRARPVERFGTPELAALLADMRDTMAHLNGAGLAAPQIGVGLRVVIFGVRSNPRYPHVEEVPDTVLINPEIEILGEEMEEDWEGCLSVPGMRGAVPRYRRLRYAGFDEQGRRIERAAGEFHARVVQHECDHLDGILYPMRIRDFAKFGFNEALFPGE 171
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A6M4H3W8_9PROT (Peptide deformylase n=1 Tax=Usitatibacter palustris TaxID=2732487 RepID=A0A6M4H3W8_9PROT) HSP 1 Score: 276 bits (705), Expect = 7.710e-90 Identity = 130/174 (74.71%), Postives = 145/174 (83.33%), Query Frame = 1
Query: 526 REVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 1047
REVL+MGD L VARPV +FGTPEL L+ DM+DTMA NGAGLAAPQIGVS RVVIFG NPRYPDAE+VPFTVL+NP IEFL+ E+EEGWEGCLSVPG+RGVVPR+ +LRY GFD G IDR+AEGFHA VVQHECDHLDGILYPMR+TD +RFGF + LFP EV DD
Sbjct: 4 REVLRMGDPVLAQVARPVEKFGTPELAELVQDMKDTMAAKNGAGLAAPQIGVSQRVVIFGVGSNPRYPDAEEVPFTVLVNPKIEFLTKEIEEGWEGCLSVPGMRGVVPRFTKLRYTGFDEHGAPIDRIAEGFHAIVVQHECDHLDGILYPMRMTDMSRFGFTDVLFPDMEVVDD 177
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A4U0GJE0_9GAMM (Peptide deformylase n=1 Tax=Sinimarinibacterium sp. CAU 1509 TaxID=2562283 RepID=A0A4U0GJE0_9GAMM) HSP 1 Score: 275 bits (704), Expect = 1.060e-89 Identity = 130/176 (73.86%), Postives = 144/176 (81.82%), Query Frame = 1
Query: 520 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 1047
MIRE+L+MGD RLL +ARPVA FGTPEL AL+ADMR+TMA NGAGLAAPQIGV LRVVIFG NPRYPDAE VPFTVL NP + LSD EEGWEGCLSVPG+RG+VPRYARLRY GFD +G I+R GFHARVVQHECDHLDG+LYPMR+ D +FGF E LFPG + DD
Sbjct: 1 MIREILRMGDPRLLQMARPVADFGTPELHALIADMRETMAAANGAGLAAPQIGVDLRVVIFGVGHNPRYPDAETVPFTVLCNPQLTPLSDAQEEGWEGCLSVPGMRGLVPRYARLRYSGFDPEGTPIEREVSGFHARVVQHECDHLDGVLYPMRIRDLRQFGFTEILFPGLGLIDD 176 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5716.2.1 >prot_P-wetherbeei_contig5716.2.1 ID=prot_P-wetherbeei_contig5716.2.1|Name=mRNA_P-wetherbeei_contig5716.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=350bp VAEGFRRRLSRLGGRHRPGLPTGQARGAGSDYRLHLGQALHLLRGPRRESback to top mRNA from alignment at P-wetherbeei_contig5716:2681..3730- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5716.2.1 ID=mRNA_P-wetherbeei_contig5716.2.1|Name=mRNA_P-wetherbeei_contig5716.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1050bp|location=Sequence derived from alignment at P-wetherbeei_contig5716:2681..3730- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5716:2681..3730- >mRNA_P-wetherbeei_contig5716.2.1 ID=mRNA_P-wetherbeei_contig5716.2.1|Name=mRNA_P-wetherbeei_contig5716.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1050bp|location=Sequence derived from alignment at P-wetherbeei_contig5716:2681..3730- (Phaeothamnion wetherbeei SAG_119_79)back to top |