mRNA_P-wetherbeei_contig56631.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56631.1.1 vs. uniprot
Match: A0A3S3K059_9HYPH (Uncharacterized protein n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A3S3K059_9HYPH) HSP 1 Score: 56.6 bits (135), Expect = 1.100e-7 Identity = 28/94 (29.79%), Postives = 53/94 (56.38%), Query Frame = 1
Query: 61 KQLEYVARMQAEYGKWIVVTLLFLHTSAIAGLLYKSQVSENRIPIVCF--ALGSVFAVLTGGSAWVNFSASMRIYIKFCDVRMLVNRKYWPSGE 336
K + ++ A+YGKW++ +LL +H +A+A L ++S+ +P V + G + A L G W N+S RIY + + M+ + ++WP+ +
Sbjct: 19 KSKRHAFQLNADYGKWLIASLLLVHGAAVAFLAQSDRLSKTVLPSVFWWHITGLLLAFLCGFLVWANWSFHARIY-EAVNPGMIYDDEHWPNFD 111
BLAST of mRNA_P-wetherbeei_contig56631.1.1 vs. uniprot
Match: A0A839PB66_9HYPH (Uncharacterized protein n=1 Tax=Mesorhizobium sp. RMAD-H1 TaxID=2587065 RepID=A0A839PB66_9HYPH) HSP 1 Score: 55.1 bits (131), Expect = 4.270e-7 Identity = 27/94 (28.72%), Postives = 51/94 (54.26%), Query Frame = 1
Query: 61 KQLEYVARMQAEYGKWIVVTLLFLHTSAIAGLLYKSQVSENRIPIVCF--ALGSVFAVLTGGSAWVNFSASMRIYIKFCDVRMLVNRKYWPSGE 336
K + ++ A+YG+W++ +LL +H + IA L +++E +P V + +G + A L G W N+S RIY + + M+ + +WP +
Sbjct: 21 KSKRHAVQLNADYGRWLIASLLLVHGAVIAFLAQNERLAEAVLPSVFWWHVIGLLLAFLCGFLVWANWSFHARIY-EAVNPGMIYDDAHWPKFD 113
BLAST of mRNA_P-wetherbeei_contig56631.1.1 vs. uniprot
Match: X5X309_9HYPH (Uncharacterized protein n=2 Tax=Mesorhizobium sp. LSHC412B00 TaxID=1287285 RepID=X5X309_9HYPH) HSP 1 Score: 53.9 bits (128), Expect = 1.340e-6 Identity = 27/102 (26.47%), Postives = 54/102 (52.94%), Query Frame = 1
Query: 37 RAQFDLQVKQLEYVARMQAEYGKWIVVTLLFLHTSAIAGLLYKSQVSENRIPIVCF--ALGSVFAVLTGGSAWVNFSASMRIYIKFCDVRMLVNRKYWPSGE 336
R ++ K + ++ A+YGKW++ +LL +H +AIA L ++S++ +P+V + G + A+ G W+N+S R + +M+ + WP +
Sbjct: 23 RLHYEEHRKDAHHAMQLNADYGKWLIASLLLVHGAAIAFLAQNDRLSKSVLPLVFWWHVTGLITALTCGFIVWINWSLHGRFHGSVSP-QMIYDDTQWPDYD 123
BLAST of mRNA_P-wetherbeei_contig56631.1.1 vs. uniprot
Match: UPI0007AEB0BF (hypothetical protein n=1 Tax=Pseudovibrio sp. Ad13 TaxID=989396 RepID=UPI0007AEB0BF) HSP 1 Score: 53.5 bits (127), Expect = 2.020e-6 Identity = 31/104 (29.81%), Postives = 49/104 (47.12%), Query Frame = 1
Query: 70 EYVARMQ------AEYGKWIVVTLLFLHTSAIAGL--LYKSQVSENRIPIV-----------CFALGSVFAVLTGGSAWVNFSASMRIYIKFCDVRMLVNRKYW 324
EY R Q A+YG+W++ +L+ LH A+AGL L S + + + C G + A+L G W+N+S Y + + ML+NR+ W
Sbjct: 21 EYRTRQQITFDVAAQYGRWLMSSLVLLHAGALAGLFTLVSSLGKDKKASVADLLVQFSGLGWCLVAGLLLALLAGLCVWLNWSYHSENYDQMANYEMLINREAW 124
BLAST of mRNA_P-wetherbeei_contig56631.1.1 vs. uniprot
Match: A0A441D0Z9_9HYPH (Uncharacterized protein n=2 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A441D0Z9_9HYPH) HSP 1 Score: 52.8 bits (125), Expect = 3.230e-6 Identity = 26/94 (27.66%), Postives = 53/94 (56.38%), Query Frame = 1
Query: 61 KQLEYVARMQAEYGKWIVVTLLFLHTSAIAGLLYKSQVSENRIPIVCF--ALGSVFAVLTGGSAWVNFSASMRIYIKFCDVRMLVNRKYWPSGE 336
K + ++ A+YG+W++ +LL +H +A+A + ++S+ +P V + G + A L G W N+S RIY + + M+ + ++WP+ +
Sbjct: 21 KSKRHAFQLNADYGRWLIASLLLVHGAAVAFVAQNDRLSKVILPSVFWWHISGLLLAFLCGFLVWANWSFHARIY-EAVNPGMIYDDEHWPNFD 113
BLAST of mRNA_P-wetherbeei_contig56631.1.1 vs. uniprot
Match: A0A545ZBY1_9HYPH (Uncharacterized protein n=1 Tax=Rhizobium sp. rho-1.1 TaxID=2506429 RepID=A0A545ZBY1_9HYPH) HSP 1 Score: 51.6 bits (122), Expect = 8.190e-6 Identity = 27/85 (31.76%), Postives = 45/85 (52.94%), Query Frame = 1
Query: 46 FDLQVKQLEYVARMQAEYGKWIVVTLLFLHTSAIAGLLYKSQVSENRI----PIVCFALGSVFAVLTGGSAWVNFSASMRIYIKF 288
F L + L ++ Q EYGKW++ +LL +H ++ + + + P + + L S A+L+GG AW+NF+A IY F
Sbjct: 15 FSLYKEMLIETSKHQFEYGKWLLASLLAVHGGSLLAISQAGEAKQRLYQACGPYLIYGLAS--ALLSGGLAWINFTAVHAIYFNF 97 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56631.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56631.1.1 >prot_P-wetherbeei_contig56631.1.1 ID=prot_P-wetherbeei_contig56631.1.1|Name=mRNA_P-wetherbeei_contig56631.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=113bp MTKELDDYQIQARAQFDLQVKQLEYVARMQAEYGKWIVVTLLFLHTSAIAback to top mRNA from alignment at P-wetherbeei_contig56631:2..340- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56631.1.1 ID=mRNA_P-wetherbeei_contig56631.1.1|Name=mRNA_P-wetherbeei_contig56631.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig56631:2..340- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56631:2..340- >mRNA_P-wetherbeei_contig56631.1.1 ID=mRNA_P-wetherbeei_contig56631.1.1|Name=mRNA_P-wetherbeei_contig56631.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig56631:2..340- (Phaeothamnion wetherbeei SAG_119_79)back to top |