mRNA_P-wetherbeei_contig56573.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56573.1.1
Unique NamemRNA_P-wetherbeei_contig56573.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig56573.1.1 vs. uniprot
Match: A0A6G6X3Y6_9HYPH (Alcohol dehydrogenase catalytic domain-containing protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6G6X3Y6_9HYPH)

HSP 1 Score: 250 bits (639), Expect = 2.240e-80
Identity = 122/139 (87.77%), Postives = 130/139 (93.53%), Query Frame = 1
Query:    7 FGATHFVDASSGDPVAAVREITGDGADFTFEATGRTEIAELCYKATRRAGTTVLIGQPTENAMAGFPPYWIAQDENRVIGSSYGSTRPMIDFPKVLRLVKHGMLNLEALVSEVWPFERINEAIALVETGSVNRMVLRFN 423
            FGATHFV+AS GDPVA VR ITGDGADFTFEATG TE AELCY+ATRRAGTTVLIGQPTENA+AGFPPYWIAQDENRVIGSSYGSTRPMIDFPK LR VKHG+L+L++LVSEVW FERINEAIALVETG VNRMVLRF+
Sbjct:  235 FGATHFVNASDGDPVAQVRAITGDGADFTFEATGITEQAELCYRATRRAGTTVLIGQPTENALAGFPPYWIAQDENRVIGSSYGSTRPMIDFPKALRFVKHGLLDLKSLVSEVWSFERINEAIALVETGRVNRMVLRFD 373          
BLAST of mRNA_P-wetherbeei_contig56573.1.1 vs. uniprot
Match: E3NVP8_CAERE (PKS_ER domain-containing protein (Fragment) n=6 Tax=cellular organisms TaxID=131567 RepID=E3NVP8_CAERE)

HSP 1 Score: 117 bits (294), Expect = 4.270e-29
Identity = 58/141 (41.13%), Postives = 87/141 (61.70%), Query Frame = 1
Query:    1 RRFGATHFVDASSGDPVAAVREIT-GDGADFTFEATGRTEIAELCYKATRRAGTTVLIGQPTENAMAGFPPYWIAQDENRVIGSSYGSTRPMIDFPKVLRLVKHGMLNLEALVSEVWPFERINEAIALVETGSVNRMVLRF 420
            RRFGATH +++   D V AVR +T G G D+ FEA G     E CY+A RR GT V++GQ  +       P+ ++  E R+IGS+YGS+R  IDFPK++ L   G ++L+++V++  P + +NEA A +  G   R V+ +
Sbjct:  203 RRFGATHTINSRETDLVEAVRALTDGRGVDYAFEAIGLPFTIEACYEAIRRGGTAVVVGQVADGVKISIDPFVMSDQEKRLIGSNYGSSRQSIDFPKIIDLYMEGKVDLDSMVTDRIPLDGVNEAFARMRAGQGIRTVIEY 343          
BLAST of mRNA_P-wetherbeei_contig56573.1.1 vs. uniprot
Match: A0A0M2M0T8_9MICO (Dehydrogenase n=2 Tax=Leucobacter sp. Ag1 TaxID=1642040 RepID=A0A0M2M0T8_9MICO)

HSP 1 Score: 117 bits (294), Expect = 6.260e-29
Identity = 58/141 (41.13%), Postives = 87/141 (61.70%), Query Frame = 1
Query:    1 RRFGATHFVDASSGDPVAAVREITGD-GADFTFEATGRTEIAELCYKATRRAGTTVLIGQPTENAMAGFPPYWIAQDENRVIGSSYGSTRPMIDFPKVLRLVKHGMLNLEALVSEVWPFERINEAIALVETGSVNRMVLRF 420
            RRFGATH V++   D V  VRE+TG  G D+ FEA G     E CY+A RR GT V++GQ  +       P+ ++  E R+IGS+YGS+R  IDFPK++ L   G ++L+++V++  P + +N+A A +  G   R V+ +
Sbjct:  226 RRFGATHTVNSREVDLVETVRELTGGRGVDYAFEAIGLPFTIEACYEAIRRGGTAVVVGQVADGVKISIDPFVMSDQEKRLIGSNYGSSRQSIDFPKIIDLYMEGKVDLDSMVTDRIPLDGVNDAFARMRAGQGIRTVIEY 366          
BLAST of mRNA_P-wetherbeei_contig56573.1.1 vs. uniprot
Match: A0A4P6KGZ9_9MICO (Zn-dependent alcohol dehydrogenase n=1 Tax=Leucobacter triazinivorans TaxID=1784719 RepID=A0A4P6KGZ9_9MICO)

HSP 1 Score: 117 bits (292), Expect = 1.280e-28
Identity = 59/141 (41.84%), Postives = 88/141 (62.41%), Query Frame = 1
Query:    1 RRFGATHFVDASSGDPVAAVREIT-GDGADFTFEATGRTEIAELCYKATRRAGTTVLIGQPTENAMAGFPPYWIAQDENRVIGSSYGSTRPMIDFPKVLRLVKHGMLNLEALVSEVWPFERINEAIALVETGSVNRMVLRF 420
            RRFGATH V++   D V+AV E+T G G D+ FEA G     E CY+AT R GTTV++GQ  +       P+ ++  E R+IGS+YGS+R  IDFP+++ L   G ++L+++V+   P E +NEA   + +G   R V+ +
Sbjct:  229 RRFGATHTVNSREVDLVSAVHELTDGRGVDYAFEAIGLPVTIEACYEATSRGGTTVVVGQVADGVKISIDPFVMSDQEKRLIGSNYGSSRQSIDFPRIIDLYLEGRVDLDSMVTARIPLEGVNEAFDEMRSGRGIRTVIEY 369          
BLAST of mRNA_P-wetherbeei_contig56573.1.1 vs. uniprot
Match: UPI0019067B2F (Zn-dependent alcohol dehydrogenase n=1 Tax=Leucobacter sp. CSA2 TaxID=2796472 RepID=UPI0019067B2F)

HSP 1 Score: 115 bits (288), Expect = 4.900e-28
Identity = 58/141 (41.13%), Postives = 86/141 (60.99%), Query Frame = 1
Query:    1 RRFGATHFVDASSGDPVAAVREIT-GDGADFTFEATGRTEIAELCYKATRRAGTTVLIGQPTENAMAGFPPYWIAQDENRVIGSSYGSTRPMIDFPKVLRLVKHGMLNLEALVSEVWPFERINEAIALVETGSVNRMVLRF 420
            R+FGATH V++   D   AVRE+T G G D+ FEA G     E CY+A RR GT V++GQ  +       P+ ++  E ++IGS+YGS+R  IDFPK+L L   G+++L+++V+   P E +NEA   +  G   R V+ +
Sbjct:  229 RKFGATHTVNSRERDLAEAVRELTDGRGVDYAFEAIGLPFTIEACYEAVRRGGTAVVVGQVADGVKISIDPFVMSDQEKKLIGSNYGSSRQSIDFPKILDLYMEGLVDLDSMVTGRIPLEGVNEAFEGMRKGQGIRTVIEY 369          
BLAST of mRNA_P-wetherbeei_contig56573.1.1 vs. uniprot
Match: UPI00199923D4 (Zinc-binding dehydrogenase n=1 Tax=Opitutaceae bacterium TaxID=2006848 RepID=UPI00199923D4)

HSP 1 Score: 110 bits (276), Expect = 7.450e-28
Identity = 57/140 (40.71%), Postives = 80/140 (57.14%), Query Frame = 1
Query:    1 RRFGATHFVDASSGDPVAAVREITGDGADFTFEATGRTEIAELCYKATRRAGTTVLIGQPTENAMAGFPPYWIAQDENRVIGSSYGSTRPMIDFPKVLRLVKHGMLNLEALVSEVWPFERINEAIALVETGSVNRMVLRF 420
            R+ GATH VDASS DP+ A++E+T  GA+  FEA G  ++    + ATRR G TV IG P  N     P   +  +E +++GS  GS  P  D P+ L L + G+L ++ L S     E +NEA   ++ G V R V+RF
Sbjct:   51 RQCGATHTVDASSNDPIVAIKELTNGGAETAFEAVGSEQVVAQAFGATRRGGKTVAIGLPHPNRQLTIPASTLVGEERQLMGSYMGSCVPQRDIPRFLGLYRAGLLPVQLLKSREIKLEEVNEAFDALDRGEVARQVIRF 190          
BLAST of mRNA_P-wetherbeei_contig56573.1.1 vs. uniprot
Match: A0A3A4X1D8_9DELT (Zn-dependent alcohol dehydrogenase n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4X1D8_9DELT)

HSP 1 Score: 114 bits (284), Expect = 1.790e-27
Identity = 57/140 (40.71%), Postives = 83/140 (59.29%), Query Frame = 1
Query:    1 RRFGATHFVDASSGDPVAAVREITGDGADFTFEATGRTEIAELCYKATRRAGTTVLIGQPTENAMAGFPPYWIAQDENRVIGSSYGSTRPMIDFPKVLRLVKHGMLNLEALVSEVWPFERINEAIALVETGSVNRMVLRF 420
            ++FGATH V+AS  +PV  ++E+TG GAD+ FEA G  +I    Y + R+ G  V +G    +A    P   +  +E  + GS YGS+RP ID PK++ L K G L L+ L+S  +PF +I EA   +E G V R ++ F
Sbjct:  227 KQFGATHTVNASEDNPVERIKELTGGGADYAFEAVGYPQILRQAYDSLRKRGMAVGVGVTPMDAEVSVPIMTLVFEEKILTGSVYGSSRPWIDIPKLIALYKAGKLKLDELLSRKYPFAKIKEAFRALERGEVARSIVTF 366          
BLAST of mRNA_P-wetherbeei_contig56573.1.1 vs. uniprot
Match: A0A7C2ZZL4_9CHLR (Zn-dependent alcohol dehydrogenase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C2ZZL4_9CHLR)

HSP 1 Score: 113 bits (283), Expect = 3.190e-27
Identity = 63/141 (44.68%), Postives = 80/141 (56.74%), Query Frame = 1
Query:    1 RRFGATHFVDASSGDPVAAVREIT-GDGADFTFEATGRTEIAELCYKATRRAGTTVLIGQPTENAMAGFPPYWIAQDENRVIGSSYGSTRPMIDFPKVLRLVKHGMLNLEALVSEVWPFERINEAIALVETGSVNRMVLRF 420
            R+FG TH V+A   DPVAA++EIT G GADFTF A G T        A    GT VLIG P         P ++   E RVIGSSYGS R  +DFP++L L + G L L+ L++  +  E +NEA   +  G V R +L F
Sbjct:  242 RQFGLTHTVNARQTDPVAAIQEITQGRGADFTFVAVGDTGAVAQAIAALAPGGTCVLIGVPPSGQTVPLDPAFLVTRERRVIGSSYGSARTWLDFPRLLDLYRAGRLKLDELITHRYRLEEVNEAFRALAAGEVARAILVF 382          
BLAST of mRNA_P-wetherbeei_contig56573.1.1 vs. uniprot
Match: A0A2V7E6R3_9BACT (Alcohol dehydrogenase n=9 Tax=unclassified Candidatus Rokubacteria TaxID=2760815 RepID=A0A2V7E6R3_9BACT)

HSP 1 Score: 112 bits (280), Expect = 6.900e-27
Identity = 59/141 (41.84%), Postives = 80/141 (56.74%), Query Frame = 1
Query:    1 RRFGATHFVDASSGDPVAAVREIT-GDGADFTFEATGRTEIAELCYKATRRAGTTVLIGQPTENAMAGFPPYWIAQDENRVIGSSYGSTRPMIDFPKVLRLVKHGMLNLEALVSEVWPFERINEAIALVETGSVNRMVLRF 420
            R FGATH V+AS GDPVAAVR +T G G D+ FE  G  +     Y    + G  V++G          P   +  +E  + GS YGS+RP ID PK++ L + G L L+ L++  +PF+ INEA A +E G V R V+ F
Sbjct:  227 REFGATHVVNASDGDPVAAVRALTSGRGVDYAFEVIGLPKTMRQAYDCLAKRGVCVVVGVAPMTMEVSVPVMSLVYEERVLTGSVYGSSRPAIDIPKLIALYRAGKLKLDELLTRTYPFKEINEAYAALERGEVARSVVTF 367          
BLAST of mRNA_P-wetherbeei_contig56573.1.1 vs. uniprot
Match: A0A2W6BD67_9BACT (Zn-dependent alcohol dehydrogenase n=1 Tax=Candidatus Dormibacteraeota bacterium TaxID=2052315 RepID=A0A2W6BD67_9BACT)

HSP 1 Score: 112 bits (279), Expect = 9.780e-27
Identity = 61/138 (44.20%), Postives = 77/138 (55.80%), Query Frame = 1
Query:    7 FGATHFVDASSGDPVAAVREITGDGADFTFEATGRTEIAELCYKATRRAGTTVLIGQPTENAMAGFPPYWIAQDENRVIGSSYGSTRPMIDFPKVLRLVKHGMLNLEALVSEVWPFERINEAIALVETGSVNRMVLRF 420
            FGA+  +DASS D V AVRE+TG G DF FEA GR E      +A R  G  V IG     A A   P+ +   E  + GS YGSTRP  DFP++  L + G L L+ L+S  +  E +NEA   + TG V R V+ F
Sbjct:  228 FGASDLIDASSEDVVKAVRELTGGGVDFAFEAIGRPETVTQALRALRAGGVAVAIGVAPPAARAEISPFDLVLQEKTLKGSIYGSTRPHADFPRLFELYRRGRLPLDRLLSRRYRLEEVNEAYDAMLTGEVARSVITF 365          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56573.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G6X3Y6_9HYPH2.240e-8087.77Alcohol dehydrogenase catalytic domain-containing ... [more]
E3NVP8_CAERE4.270e-2941.13PKS_ER domain-containing protein (Fragment) n=6 Ta... [more]
A0A0M2M0T8_9MICO6.260e-2941.13Dehydrogenase n=2 Tax=Leucobacter sp. Ag1 TaxID=16... [more]
A0A4P6KGZ9_9MICO1.280e-2841.84Zn-dependent alcohol dehydrogenase n=1 Tax=Leucoba... [more]
UPI0019067B2F4.900e-2841.13Zn-dependent alcohol dehydrogenase n=1 Tax=Leucoba... [more]
UPI00199923D47.450e-2840.71Zinc-binding dehydrogenase n=1 Tax=Opitutaceae bac... [more]
A0A3A4X1D8_9DELT1.790e-2740.71Zn-dependent alcohol dehydrogenase n=1 Tax=Desulfo... [more]
A0A7C2ZZL4_9CHLR3.190e-2744.68Zn-dependent alcohol dehydrogenase n=1 Tax=Chlorof... [more]
A0A2V7E6R3_9BACT6.900e-2741.84Alcohol dehydrogenase n=9 Tax=unclassified Candida... [more]
A0A2W6BD67_9BACT9.780e-2744.20Zn-dependent alcohol dehydrogenase n=1 Tax=Candida... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56573contigP-wetherbeei_contig56573:3..437 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog31234.CRE01517
PFAMsADH_N,ADH_zinc_N
Model size435
Max annot lvl33208|Metazoa
KEGG rclassRC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01715,RC01734,RC02273
KEGG koko:K00121
KEGG ReactionR00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R06983,R07105,R08281,R08306,R08310
KEGG Pathwayko00010,ko00071,ko00350,ko00625,ko00626,ko00680,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko05204,map00010,map00071,map00350,map00625,map00626,map00680,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01200,map01220,map05204
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.01e-30
EggNOG OGsCOG1062@1|root,KOG0022@2759|Eukaryota,38BN7@33154|Opisthokonta,3BF0K@33208|Metazoa,3CS28@33213|Bilateria,40B4H@6231|Nematoda,1KUJM@119089|Chromadorea,40W9Y@6236|Rhabditida
EC1.1.1.1,1.1.1.284
DescriptionBelongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily
Cds size435
COG categoryQ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186840.66762-CDS-P-wetherbeei_contig56573:2..4371683186840.66762-CDS-P-wetherbeei_contig56573:2..437Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56573 3..437 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56573.1.1prot_P-wetherbeei_contig56573.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56573 3..437 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56573.1.1

>prot_P-wetherbeei_contig56573.1.1 ID=prot_P-wetherbeei_contig56573.1.1|Name=mRNA_P-wetherbeei_contig56573.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=145bp
RRFGATHFVDASSGDPVAAVREITGDGADFTFEATGRTEIAELCYKATRR
AGTTVLIGQPTENAMAGFPPYWIAQDENRVIGSSYGSTRPMIDFPKVLRL
VKHGMLNLEALVSEVWPFERINEAIALVETGSVNRMVLRFNDKT*
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mRNA from alignment at P-wetherbeei_contig56573:3..437+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56573.1.1 ID=mRNA_P-wetherbeei_contig56573.1.1|Name=mRNA_P-wetherbeei_contig56573.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig56573:3..437+ (Phaeothamnion wetherbeei SAG_119_79)
CGGCGCTTCGGCGCCACCCATTTCGTCGATGCCTCAAGCGGCGATCCTGT GGCAGCGGTGCGGGAAATCACCGGAGACGGCGCCGATTTCACTTTTGAAG CAACCGGCCGCACCGAAATCGCCGAGCTTTGTTACAAGGCCACCAGGCGC GCCGGAACCACGGTTCTCATTGGCCAGCCGACAGAAAATGCCATGGCGGG CTTTCCGCCCTACTGGATCGCCCAGGATGAAAACCGCGTCATCGGCTCAA GCTACGGCTCGACGCGCCCGATGATCGATTTTCCAAAAGTCCTGCGGCTG GTCAAGCACGGGATGCTGAACCTCGAGGCGTTGGTCTCGGAGGTTTGGCC GTTTGAACGGATCAACGAGGCAATCGCCCTTGTTGAAACTGGAAGCGTAA ACCGCATGGTTCTCCGCTTCAACGACAAGACTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56573:3..437+

>mRNA_P-wetherbeei_contig56573.1.1 ID=mRNA_P-wetherbeei_contig56573.1.1|Name=mRNA_P-wetherbeei_contig56573.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=435bp|location=Sequence derived from alignment at P-wetherbeei_contig56573:3..437+ (Phaeothamnion wetherbeei SAG_119_79)
CGGCGCTTCGGCGCCACCCATTTCGTCGATGCCTCAAGCGGCGATCCTGT
GGCAGCGGTGCGGGAAATCACCGGAGACGGCGCCGATTTCACTTTTGAAG
CAACCGGCCGCACCGAAATCGCCGAGCTTTGTTACAAGGCCACCAGGCGC
GCCGGAACCACGGTTCTCATTGGCCAGCCGACAGAAAATGCCATGGCGGG
CTTTCCGCCCTACTGGATCGCCCAGGATGAAAACCGCGTCATCGGCTCAA
GCTACGGCTCGACGCGCCCGATGATCGATTTTCCAAAAGTCCTGCGGCTG
GTCAAGCACGGGATGCTGAACCTCGAGGCGTTGGTCTCGGAGGTTTGGCC
GTTTGAACGGATCAACGAGGCAATCGCCCTTGTTGAAACTGGAAGCGTAA
ACCGCATGGTTCTCCGCTTCAACGACAAGACTTGA
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