mRNA_P-wetherbeei_contig565.11.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig565.11.1 vs. uniprot
Match: D7FWH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWH7_ECTSI) HSP 1 Score: 219 bits (557), Expect = 4.180e-69 Identity = 110/183 (60.11%), Postives = 132/183 (72.13%), Query Frame = 1
Query: 1 VPRPRKKGMTVCCPVVYGSMAWWLGKKADDQH-THRWTLFVQGPNGEDISYFVSKVVFHLHPSFPEPLREITSYPFEVTEMGWGEFGAKMTLHFRDPGEAPVDVAHNLRLYGDPSVPLTT-KQPVVAEQYDEVVFTDPSADFFDCLTRGHDAVPLAAPERQPFHARFRDADDVLRLVVARRFV 543
VP+ RKKG++V CP+ YGS+A+ L +K + TH+WTLFV+GPNGEDISYFVSKVVF LHPSF E REITS PFEVTEMGWGEF AKMT+HF+DP E PVDV H LRLY DP+ T K+ VVAE YDEVVFTDP +F++ L +G +P E Q + F D D + RL AR +V
Sbjct: 11 VPKIRKKGLSVACPIAYGSLAFLLERKKQSEFVTHKWTLFVRGPNGEDISYFVSKVVFTLHPSFAEATREITSPPFEVTEMGWGEFEAKMTMHFKDPNEKPVDVLHQLRLYHDPATGTTQPKKAVVAEFYDEVVFTDPYEEFYNTLMQGQKLLPQRKHEHQEHFSTFSDGDTLQRLAAAREWV 193
BLAST of mRNA_P-wetherbeei_contig565.11.1 vs. uniprot
Match: A0A835ZJW2_9STRA (Yeats family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJW2_9STRA) HSP 1 Score: 202 bits (515), Expect = 3.090e-62 Identity = 98/178 (55.06%), Postives = 123/178 (69.10%), Query Frame = 1
Query: 13 RKKGMTVCCPVVYGSMAWWLGKKADDQHTHRWTLFVQGPNGEDISYFVSKVVFHLHPSFPEPLREITSYPFEVTEMGWGEFGAKMTLHFRDPGEAPVDVAHNLRLYGDPSVPLTTKQ-PVVAEQYDEVVFTDPSADFFDCLTRGHDAVPLAAPERQPFHARFRDADDVLRLVVARRFV 543
R G+TVCCPVV+G +A+ LGK D+ HTH WTL+V+G +GEDISYFVSKVVF LH SF P RE+T +P+EVTE GWGEF AK+TLHF+DP E P+DV H ++LY D +P PVV E+YDE+VFTDP FF CL G A P+ Q ++ F +DV +L AR +V
Sbjct: 11 RMSGVTVCCPVVFGCVAFLLGKDGDELHTHCWTLYVRGAHGEDISYFVSKVVFTLHASFEPPTRELTEWPYEVTEKGWGEFEAKITLHFKDPAERPIDVPHPVKLYADAGMPAPGPGVPVVTERYDEIVFTDPKEGFFACLMEGQTAAVREHPQLQ-YYKDFSAEEDVQKLAAAREYV 187
BLAST of mRNA_P-wetherbeei_contig565.11.1 vs. uniprot
Match: A0A7S3ZZU1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZU1_9STRA) HSP 1 Score: 197 bits (500), Expect = 3.890e-60 Identity = 96/180 (53.33%), Postives = 123/180 (68.33%), Query Frame = 1
Query: 4 PRPRKKGMTVCCPVVYGSMAWWLGKKADDQHTHRWTLFVQGPNGEDISYFVSKVVFHLHPSFPEPLREITSYPFEVTEMGWGEFGAKMTLHFRDPGEAPVDVAHNLRLYGDPSVPLTTKQPVVAEQYDEVVFTDPSADFFDCLTRGHDAVPLAAPERQPFHARFRDADDVLRLVVARRFV 543
P R K VCCP+VYGS+A+WLG+KAD+ HTH+WTLFV+GP+GED+ YFV KVVF LHPSF +P+RE+T PFEV+E GWGEF + +HF+DP E PV+V+H ++LY D + P QPVV+E YDEVVFTDP F+ L P F ++F DA +V LV A +V
Sbjct: 33 PAKRVKDAAVCCPLVYGSLAFWLGRKADEFHTHKWTLFVRGPHGEDLGYFVEKVVFKLHPSFAQPVREVTKPPFEVSEKGWGEFECHIRIHFKDPTEKPVEVSHIVKLY-DGTTPQAANQPVVSEVYDEVVFTDPREPFYQQLMAASKEPTEPHPLNGHF-SKFEDAAEVETLVKAGEYV 210
BLAST of mRNA_P-wetherbeei_contig565.11.1 vs. uniprot
Match: A0A7S2RH18_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RH18_9STRA) HSP 1 Score: 193 bits (491), Expect = 5.860e-59 Identity = 96/178 (53.93%), Postives = 123/178 (69.10%), Query Frame = 1
Query: 25 MTVCCPVVYGSMAWWLGKKADDQHTHRWTLFVQGPNGEDISYFVSKVVFHLHPSFPEPLREITSYPFEVTEMGWGEFGAKMTLHFRDPGEAPVDVAHNLRLYGDPSVPLTTKQPVVAEQYDEVVFTDPSADFF-----DCLTRGHDAVPLAAPERQPFHARFRDADDVLRLVVARRFV 543
+TV CPVV+GS A+WLG+KAD+ THRWTL+V+G EDISYFVSKV FHLH SF +P+RE+ P+EVTE+GWGEF A++ LHFRDPGE P+DV H+++LY +VP + K+PVV E YDEVVFT P F DC T+ H ++ Q F DA D+ LV A++ V
Sbjct: 43 VTVHCPVVFGSAAFWLGRKADETATHRWTLYVRGAGNEDISYFVSKVTFHLHESFAQPVREVLQPPYEVTELGWGEFDARIRLHFRDPGEEPIDVVHSIKLYPSGNVPPSLKKPVVHEVYDEVVFTSPKQSLFEKMHRDCRTK-HSSISF-----QEHLPEFSDAHDMQVLVEAQKLV 214
BLAST of mRNA_P-wetherbeei_contig565.11.1 vs. uniprot
Match: A0A7R9Y9J6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9J6_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.290e-58 Identity = 96/182 (52.75%), Postives = 128/182 (70.33%), Query Frame = 1
Query: 1 VPRPRKKGMTVCCPVVYGSMAWWLGKKADDQHTHRWTLFVQGPNGEDISYFVSKVVFHLHPSFPEPLREITSYPFEVTEMGWGEFGAKMTLHFRDPGEAPVDVAHNLRLYGDPSVPLTTKQPVVAEQYDEVVFTDPSADFFD-CLTRGHDAVPLAAPERQPFHARFRDADDVLRLVVARRFV 543
V R+K VCCP+VYGS+A+W+GKKAD+ TH+WTL+V+GPN ED+ YF+ KVVF LH SF P RE+ + PFEVTE GWGEF AK+ L+FRD E V+VAH + LY + L+ K+PVV+E+YDEVVFT+P+ DF++ L R +D P A P ++ F A + D DV +L AR +
Sbjct: 8 VSSERRKNTLVCCPIVYGSIAFWMGKKADEHSTHQWTLYVRGPNDEDLGYFIDKVVFVLHHSFANPERELRAPPFEVTEKGWGEFEAKIRLYFRDASERMVEVAHTIALYPPNNSQLSVKKPVVSEKYDEVVFTEPAEDFYEHVLQRQYDTRP-AHPLQEHFLA-YTDMHDVEKLTAAREIL 187
BLAST of mRNA_P-wetherbeei_contig565.11.1 vs. uniprot
Match: F0Y5R3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5R3_AURAN) HSP 1 Score: 188 bits (478), Expect = 1.330e-58 Identity = 84/132 (63.64%), Postives = 105/132 (79.55%), Query Frame = 1
Query: 13 RKKGMTVCCPVVYGSMAWWLGKKADDQHTHRWTLFVQGPNGEDISYFVSKVVFHLHPSFPEPLREITSYPFEVTEMGWGEFGAKMTLHFRDPGEAPVDVAHNLRLYGDPSVPLTTKQPVVAEQYDEVVFTDP 408
RKK VCCP+VYGS+A+WLG+KAD+ HTH+WTLFV+GP+GED+ YFV KVVF LHPSF +P+REI P+EVTE GWGEF A + +HFRDP E PV+ +H ++LY D + P QPVV+E YDEVVFT+P
Sbjct: 1 RKKNTAVCCPLVYGSVAFWLGRKADEYHTHKWTLFVRGPHGEDLGYFVEKVVFKLHPSFAQPVREIHEPPYEVTEKGWGEFEASVRVHFRDPSERPVEFSHVVKLY-DGTTPQVATQPVVSEVYDEVVFTEP 131
BLAST of mRNA_P-wetherbeei_contig565.11.1 vs. uniprot
Match: A0A6U3QEB4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3QEB4_9STRA) HSP 1 Score: 181 bits (458), Expect = 3.250e-54 Identity = 89/172 (51.74%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 37 CPVVYGSMAWWLGKKADDQHTHRWTLFVQGPNGEDISYFVSKVVFHLHPSFPEPLREITSYPFEVTEMGWGEFGAKMTLHFRDPGEA--PVDVAHNLRLYGDPSVPLTTKQPVVAEQYDEVVFTDPSADFFDCLTRGHDAVPLAAPER-QPFHARFRDADDVLRLVVARRFV 543
CP+VYGS+A WLG+KAD+ HTHRWTLFV+GPNGED++YF+SKVVF LHPSF +P+REI PFEVTE GWGEF A + L+F D G P+++ H +RLY + T K+PVV E YD++VFT+P+ + D L RG A A P + Q + ++ D+ L A +F+
Sbjct: 13 CPIVYGSIAHWLGRKADEAHTHRWTLFVRGPNGEDLTYFLSKVVFTLHPSFAQPVREIFQPPFEVTEKGWGEFEATIRLYFHDTGNGMKPMEITHPIRLYPHGNTAPTVKKPVVFELYDQIVFTNPAKELCDRLKRG--ATKQAPPHQLQDNFTVYDESADIELLTAAHKFI 182
BLAST of mRNA_P-wetherbeei_contig565.11.1 vs. uniprot
Match: A0A7S1Z287_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z287_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.090e-52 Identity = 91/184 (49.46%), Postives = 121/184 (65.76%), Query Frame = 1
Query: 10 PRKKGMTVCCPVVYGSMAWWLGKKADDQHTHRWTLFVQGPNGEDISYFVSKVVFHLHPSFPEPLREITSYPFEVTEMGWGEFGAKMTLHFRDPGEAPVDVAHNLRLYGDPSVPLT----TKQPVVAEQYDEVVFTDPSADFFDCLTRGH--DAVPLAAPERQPFHARFRDADDVLRLVVARRFV 543
PR TVC P+VYGS+A++LGKKAD+ HTHRWTL+V+ PNGED+S +SKVVF LHPSFP+P+RE+T+ PFEVTE GWGEF A + + +RDPGE + H ++LY +T +K+PVV E YDEVVFTDP+ F L R + P Q + D +D L+ A++F+
Sbjct: 27 PRLLNTTVCVPIVYGSIAFFLGKKADEYHTHRWTLYVRSPNGEDLSTGISKVVFQLHPSFPQPVRELTAPPFEVTEKGWGEFEATIRIVWRDPGEKATVLTHGIKLYPPGLTQITPATTSKEPVVHEFYDEVVFTDPTEAFHRQLMRSSVLPRIQSHEPTVQENFPTYADEEDFKALLAAQKFL 210
BLAST of mRNA_P-wetherbeei_contig565.11.1 vs. uniprot
Match: A0A7S0KWW5_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KWW5_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.800e-52 Identity = 87/177 (49.15%), Postives = 123/177 (69.49%), Query Frame = 1
Query: 28 TVCCPVVYGSMAWWLGKKADDQHTHRWTLFVQGPNGEDISYFVSKVVFHLHPSFPEPLREITSYPFEVTEMGWGEFGAKMTLHFRDPGEAPVDVAHNLRLYGDPSV---PLTTKQPVVAEQYDEVVFTDPSADFFDCLTRGHDA--VPLAAPERQPFHARFRDADDVLRLVVARRFV 543
T C P+VYGSMA++LGKKAD+ THRWTL+++GPN ED+S V+K +F LHPSF +P+RE+T+ PFEVTE GWGEF A++ + ++DP E P + H ++LY + P T+K+PV+AE YDEVVFT+P+ +F+ L R A V A P Q + D DD +L+ A++F+
Sbjct: 79 TACVPLVYGSMAFYLGKKADEYSTHRWTLYLRGPNNEDLSTCVAKAIFQLHPSFAQPVRELTTPPFEVTEKGWGEFEAQIKIVWKDPKEKPTLLTHGIKLYPSGATNITPTTSKEPVIAENYDEVVFTNPTENFYKQLMRTSIAPKVQSAEPTIQAAFKTYADEDDFQKLIEAQKFL 255
BLAST of mRNA_P-wetherbeei_contig565.11.1 vs. uniprot
Match: L8HD99_ACACA (YEATS family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HD99_ACACA) HSP 1 Score: 173 bits (439), Expect = 2.000e-50 Identity = 81/146 (55.48%), Postives = 106/146 (72.60%), Query Frame = 1
Query: 1 VPRP-RKKGMTVCCPVVYGSMAWWLGKKADDQHTHRWTLFVQGPNGEDISYFVSKVVFHLHPSFPEPLREITSYPFEVTEMGWGEFGAKMTLHFRDPGEAPVDVAHNLRLYG-DPSVPLTTKQPVVAEQYDEVVFTDPSADFFDCL 432
VP P R KG V P++YG+++WWLGKKADD THRWT +V+GP+ ED+SYF+ KVVF LHPSFP P+R I + P+E+TE GWGEF + +HF DP E PVD+ H L LY + +V L+TK+PV+ E YDE+ F DP+ F+ L
Sbjct: 67 VPAPARVKGALVERPIIYGNISWWLGKKADDTKTHRWTTYVRGPHNEDLSYFIKKVVFTLHPSFPNPVRVIETPPYEITEHGWGEFELNIKIHFVDPLEVPVDLVHALVLYPPEGNVGLSTKKPVIKEIYDEIEFHDPTESFYKIL 212 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig565.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig565.11.1 >prot_P-wetherbeei_contig565.11.1 ID=prot_P-wetherbeei_contig565.11.1|Name=mRNA_P-wetherbeei_contig565.11.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp MTVCCPVVYGSMAWWLGKKADDQHTHRWTLFVQGPNGEDISYFVSKVVFHback to top mRNA from alignment at P-wetherbeei_contig565:7701..9579+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig565.11.1 ID=mRNA_P-wetherbeei_contig565.11.1|Name=mRNA_P-wetherbeei_contig565.11.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1879bp|location=Sequence derived from alignment at P-wetherbeei_contig565:7701..9579+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig565:7701..9579+ >mRNA_P-wetherbeei_contig565.11.1 ID=mRNA_P-wetherbeei_contig565.11.1|Name=mRNA_P-wetherbeei_contig565.11.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=519bp|location=Sequence derived from alignment at P-wetherbeei_contig565:7701..9579+ (Phaeothamnion wetherbeei SAG_119_79)back to top |