mRNA_P-wetherbeei_contig56423.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56423.1.1
Unique NamemRNA_P-wetherbeei_contig56423.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig56423.1.1 vs. uniprot
Match: UPI0016B430FA (NTP transferase domain-containing protein n=2 Tax=Aromatoleum toluvorans TaxID=92002 RepID=UPI0016B430FA)

HSP 1 Score: 172 bits (436), Expect = 1.250e-51
Identity = 89/162 (54.94%), Postives = 106/162 (65.43%), Query Frame = 1
Query:    1 LPDGTPIGVTSLRNLRSALPDVIAVVRSDDIRLCELLRKEGITVVLCDDAAQGMARSLVCAVDASRDSDGWVIALGDMPFLLPQTIAMVAARTEQTGRIVIPAYEGERGHPVGFGRRYRDELLALQGDEGARSVIARHRVDMDTIDCGDRGILRDVDTPADL 486
            L DGTP+ V S  NLR AL ++IAVVR +D  L       GI  VLC DA QGMA +LVC + A+  + GWVIALGDMP++ P TIA VAA       +  P  +G+RGHPVGF    +DELLALQGDEGAR VI  H+  +  IDC D GIL D+D PADL
Sbjct:   33 LADGTPVAVRSAENLRDALGEMIAVVRPEDSILRGHFDAAGIAYVLCPDAGQGMAATLVCGIRATPGAAGWVIALGDMPYIRPDTIAAVAAAIRDGALLAAPFTDGQRGHPVGFATSLKDELLALQGDEGARRVIVGHKEQLRRIDCDDPGILADIDVPADL 194          
BLAST of mRNA_P-wetherbeei_contig56423.1.1 vs. uniprot
Match: UPI0019B864A7 (Nucleotidyltransferase family protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019B864A7)

HSP 1 Score: 170 bits (431), Expect = 6.150e-51
Identity = 83/163 (50.92%), Postives = 107/163 (65.64%), Query Frame = 1
Query:    1 LPDGTPIGVTSLRNLRSALPDVIAVVRSDDIRLCELLRKEGITVVLCDDAAQGMARSLVCAVDASRDSDGWVIALGDMPFLLPQTIAMVAARTEQTGRIVIPAYEGERGHPVGFGRRYRDELLALQGDEGARSVIARHRVDMDTIDCGDRGILRDVDTPADLS 489
            L DGTPI V + RNL+ A   V+AVVR  D  L + L+ EG+ + +C+ AA GM  SL C V A+ D+DGW+I L DMPF+ P+T+  V    E    I  P++ G+RGHPVGFGR    ELLAL+GD GAR ++ RH  ++   DC DRGI RD+DT ADLS
Sbjct:   24 LRDGTPIAVAAARNLKHATERVLAVVRPGDDVLAQRLQAEGLEIAVCESAAAGMGHSLACGVAATSDADGWLITLADMPFVSPETLRTVIHHLEAGATIAAPSFNGQRGHPVGFGRSLYPELLALEGDFGARILLTRHATEVKLFDCDDRGICRDIDTAADLS 186          
BLAST of mRNA_P-wetherbeei_contig56423.1.1 vs. uniprot
Match: A0A1F4FEX6_9PROT (NTP_transf_3 domain-containing protein (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4FEX6_9PROT)

HSP 1 Score: 169 bits (429), Expect = 7.780e-51
Identity = 84/160 (52.50%), Postives = 109/160 (68.12%), Query Frame = 1
Query:   10 GTPIGVTSLRNLRSALPDVIAVVRSDDIRLCELLRKEGITVVLCDDAAQGMARSLVCAVDASRDSDGWVIALGDMPFLLPQTIAMVAARTEQTGRIVIPAYEGERGHPVGFGRRYRDELLALQGDEGARSVIARHRVDMDTIDCGDRGILRDVDTPADLS 489
            GTP+ V + R+L  ALP+ +AVVR    ++ +LLR+ G   V+C +AAQGM  SL   V A+ D+DGWVIAL DMPF+  +TI  VA   ++   I  PA  GERGHPVGF RR+RD+LLAL GDEGAR ++  H   +   + GDRG+LRDVD PADL+
Sbjct:   16 GTPVAVAAARHLAEALPEPLAVVRPRAQKVSQLLREAGCRTVICRNAAQGMGTSLAAGVRAAGDADGWVIALADMPFIRAETIRRVAMALQEGAAIAAPACGGERGHPVGFARRFRDDLLALTGDEGAREILEAHPAWITLYETGDRGVLRDVDVPADLA 175          
BLAST of mRNA_P-wetherbeei_contig56423.1.1 vs. uniprot
Match: A0A2I6SAY5_9RHOO (Nucleotidyltransferase family protein n=1 Tax=Aromatoleum pumilum TaxID=2067960 RepID=A0A2I6SAY5_9RHOO)

HSP 1 Score: 170 bits (431), Expect = 8.890e-51
Identity = 91/164 (55.49%), Postives = 108/164 (65.85%), Query Frame = 1
Query:    1 LPDGTPIGVTSLRNLRSALPD-VIAVVRSDDIRLCELLRKEGITVVLCDDAAQGMARSLVCAVDASRDSDGWVIALGDMPFLLPQTIAMVAARTEQTGRIVIPAYEGERGHPVGFGRRYRDELLALQGDEGARSVIARHRVDMDTIDCGDRGILRDVDTPADLS 489
            LPDGTPIG+ S R LR+ALP  V+AVVR  +  L      +GI  V C DA  GM  SL   V A+ D+ GW+IALGDMPF+  +T+A VAA      RI  P + G RGHPVGF    RDELL L GDEGARSV+ARHR D+  I C D G+L D+DTPADL+
Sbjct:   31 LPDGTPIGLASARALRAALPGRVLAVVRFGETNLRGEFEADGIECVECADADSGMGASLARGVRATDDAAGWLIALGDMPFVRTETVAAVAAALSDGARIAAPMHAGRRGHPVGFSADLRDELLTLGGDEGARSVVARHRRDLVPIHCDDAGVLADIDTPADLA 194          
BLAST of mRNA_P-wetherbeei_contig56423.1.1 vs. uniprot
Match: UPI0003664A92 (nucleotidyltransferase family protein n=2 Tax=Aromatoleum toluclasticum TaxID=92003 RepID=UPI0003664A92)

HSP 1 Score: 168 bits (425), Expect = 5.820e-50
Identity = 83/162 (51.23%), Postives = 107/162 (66.05%), Query Frame = 1
Query:    1 LPDGTPIGVTSLRNLRSALPDVIAVVRSDDIRLCELLRKEGITVVLCDDAAQGMARSLVCAVDASRDSDGWVIALGDMPFLLPQTIAMVAARTEQTGRIVIPAYEGERGHPVGFGRRYRDELLALQGDEGARSVIARHRVDMDTIDCGDRGILRDVDTPADL 486
            L DGTP+ V S  NL  AL  V+AVVR +D  L       GI  VLC DA +GMA +L C + A+  + GWVIALGDMP++ P+T+A+VAA   +   +  P ++G+RGHPVGF    +DELLALQGDEGAR VI  H+  +  IDC D G+L D+D PAD+
Sbjct:   33 LADGTPVAVRSAENLHEALGKVLAVVRPEDSVLRGHFDAAGIRYVLCADAGEGMAATLACGIRATPGATGWVIALGDMPYIRPETVAVVAAVLGEGALLAAPFFDGQRGHPVGFAAALKDELLALQGDEGARRVIVAHKEHLQRIDCDDPGVLADIDVPADV 194          
BLAST of mRNA_P-wetherbeei_contig56423.1.1 vs. uniprot
Match: UPI00177D44B8 (nucleotidyltransferase family protein n=1 Tax=Azoarcus sp. Aa7 TaxID=2303328 RepID=UPI00177D44B8)

HSP 1 Score: 166 bits (421), Expect = 2.350e-49
Identity = 85/160 (53.12%), Postives = 103/160 (64.38%), Query Frame = 1
Query:    7 DGTPIGVTSLRNLRSALPDVIAVVRSDDIRLCELLRKEGITVVLCDDAAQGMARSLVCAVDASRDSDGWVIALGDMPFLLPQTIAMVAARTEQTGRIVIPAYEGERGHPVGFGRRYRDELLALQGDEGARSVIARHRVDMDTIDCGDRGILRDVDTPADL 486
            DGTP+ V S  NLR AL DV+AVVR DD  L       GI  VLC DA QGMA +L C + A+  + GW+IALGDMP++   T+A VA+       +  P  +G+RGHPVGF    +DELLALQGDEGAR VI  H+  +  IDC D GIL D+D PADL
Sbjct:   35 DGTPVAVRSAVNLRDALGDVLAVVRPDDALLRGHFDGAGIPCVLCPDAGQGMAATLACGIRATSGAAGWIIALGDMPYIRQGTMAAVASAIANGALLAAPFVDGQRGHPVGFAAPLKDELLALQGDEGARRVIVAHKEQLHHIDCDDAGILADIDVPADL 194          
BLAST of mRNA_P-wetherbeei_contig56423.1.1 vs. uniprot
Match: UPI00145F981C (nucleotidyltransferase family protein n=1 Tax=Aromatoleum evansii TaxID=59406 RepID=UPI00145F981C)

HSP 1 Score: 166 bits (420), Expect = 3.330e-49
Identity = 82/162 (50.62%), Postives = 107/162 (66.05%), Query Frame = 1
Query:    1 LPDGTPIGVTSLRNLRSALPDVIAVVRSDDIRLCELLRKEGITVVLCDDAAQGMARSLVCAVDASRDSDGWVIALGDMPFLLPQTIAMVAARTEQTGRIVIPAYEGERGHPVGFGRRYRDELLALQGDEGARSVIARHRVDMDTIDCGDRGILRDVDTPADL 486
            LPDGTP+ + S+ NLR AL +V+AVVR +D  L     +  I  V C DA +GMA +L C +  + ++ GWVIALGDMP++ P T+A VA R      +  P ++G+RGHPVGF    RDELLAL+GDEGAR VI  H+  +  IDC D GIL D+D PAD+
Sbjct:   33 LPDGTPVALRSVLNLREALGEVLAVVRPEDAVLRAHFDQALIPYVQCADAGEGMAATLACGIRETHEAAGWVIALGDMPYMRPDTVAAVAGRICDGALLAAPFFQGQRGHPVGFAAALRDELLALEGDEGARRVILAHKEQLRRIDCDDPGILADIDVPADV 194          
BLAST of mRNA_P-wetherbeei_contig56423.1.1 vs. uniprot
Match: A0A317H063_9PROT (Nucleotidyltransferase family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A317H063_9PROT)

HSP 1 Score: 166 bits (420), Expect = 3.540e-49
Identity = 78/165 (47.27%), Postives = 111/165 (67.27%), Query Frame = 1
Query:    1 LPDGTPIGVTSLRNLRSALPDVIAVVRSDDIRLCELLRKEGITVVLCDDAAQGMARSLVCAVDASRDSDGWVIALGDMPFLLPQTIAMVAARTEQTGRIVIPAYEGERGHPVGFGRRYRDELLALQGDEGARSVIARHRVDMDTIDCGDRGILRDVDTPADLSRS 495
            L DGT +GV SLRNLR+ALP ++AVVR+ D  L +LL  EG+TVV C +A  GM  +L   V ++ ++ GW++ALGDMP +  +TI  +         IV+P + G RGHPVGF  ++RDEL+ LQGD GARS++A H   +  ++  D G+++DVDT AD+ R+
Sbjct:   28 LADGTALGVASLRNLRTALPHIVAVVRAGDTELADLLSAEGVTVVECANAHLGMGHTLAAGVLSTSEAHGWIVALGDMPCIASKTIGAIKNELANGAPIVVPVWHGRRGHPVGFSHQFRDELMRLQGDVGARSILASHSTQVRLLEVNDEGVVKDVDTLADVPRT 192          
BLAST of mRNA_P-wetherbeei_contig56423.1.1 vs. uniprot
Match: A0A1F3YLC5_9PROT (NTP_transf_3 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RBG_16_64_18 TaxID=1797477 RepID=A0A1F3YLC5_9PROT)

HSP 1 Score: 166 bits (419), Expect = 4.580e-49
Identity = 82/160 (51.25%), Postives = 108/160 (67.50%), Query Frame = 1
Query:   10 GTPIGVTSLRNLRSALPDVIAVVRSDDIRLCELLRKEGITVVLCDDAAQGMARSLVCAVDASRDSDGWVIALGDMPFLLPQTIAMVAARTEQTGRIVIPAYEGERGHPVGFGRRYRDELLALQGDEGARSVIARHRVDMDTIDCGDRGILRDVDTPADLS 489
            G P+ V S R+L  ALP+ +AVVR    ++ +LLR+ G   V+C +AAQGM  SL   V A+ D+DGWV+AL DMPF+ P+TI  +A   E+   I  PA  GERGHPVGF RR+RD+LLAL+GDEGAR V+  +   +   +  DRG+LRDVD P DL+
Sbjct:   33 GAPVAVASARHLAEALPESVAVVRPRAQKVSQLLREAGCRTVICRNAAQGMGTSLAAGVRAAGDADGWVVALADMPFIRPETIRRIARALEEGAAIAAPACGGERGHPVGFARRFRDDLLALRGDEGARQVLNAYPDWITLYETDDRGVLRDVDVPGDLA 192          
BLAST of mRNA_P-wetherbeei_contig56423.1.1 vs. uniprot
Match: UPI00145ED29C (nucleotidyltransferase family protein n=1 Tax=Aromatoleum petrolei TaxID=76116 RepID=UPI00145ED29C)

HSP 1 Score: 165 bits (417), Expect = 9.490e-49
Identity = 84/162 (51.85%), Postives = 104/162 (64.20%), Query Frame = 1
Query:    1 LPDGTPIGVTSLRNLRSALPDVIAVVRSDDIRLCELLRKEGITVVLCDDAAQGMARSLVCAVDASRDSDGWVIALGDMPFLLPQTIAMVAARTEQTGRIVIPAYEGERGHPVGFGRRYRDELLALQGDEGARSVIARHRVDMDTIDCGDRGILRDVDTPADL 486
            LPDGTP+ V S  NLR AL  V+AVVR +D  L       G+  VLC DA QGMA +L C + A+  + GWVIALGDMP++ P+TIA VAA       +  P  +GERGHPVGF    +DELLALQGDEGAR VI  H+  +  + C D G+L D+D P D+
Sbjct:   33 LPDGTPVAVRSATNLRGALGAVLAVVRPEDSLLRGHFDAAGLPYVLCPDAEQGMAATLACGIRATACTAGWVIALGDMPYIRPETIAAVAAAIGGGALLAAPFVDGERGHPVGFAVSLKDELLALQGDEGARRVIVAHKEQLRRVHCDDPGVLADIDVPGDV 194          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56423.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0016B430FA1.250e-5154.94NTP transferase domain-containing protein n=2 Tax=... [more]
UPI0019B864A76.150e-5150.92Nucleotidyltransferase family protein n=1 Tax=Burk... [more]
A0A1F4FEX6_9PROT7.780e-5152.50NTP_transf_3 domain-containing protein (Fragment) ... [more]
A0A2I6SAY5_9RHOO8.890e-5155.49Nucleotidyltransferase family protein n=1 Tax=Arom... [more]
UPI0003664A925.820e-5051.23nucleotidyltransferase family protein n=2 Tax=Arom... [more]
UPI00177D44B82.350e-4953.13nucleotidyltransferase family protein n=1 Tax=Azoa... [more]
UPI00145F981C3.330e-4950.62nucleotidyltransferase family protein n=1 Tax=Arom... [more]
A0A317H063_9PROT3.540e-4947.27Nucleotidyltransferase family protein n=1 Tax=Prot... [more]
A0A1F3YLC5_9PROT4.580e-4951.25NTP_transf_3 domain-containing protein n=1 Tax=Bet... [more]
UPI00145ED29C9.490e-4951.85nucleotidyltransferase family protein n=1 Tax=Arom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56423contigP-wetherbeei_contig56423:2..499 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1123368.AUIS01000019_gene1216
Preferred nameygfJ
PFAMsNTP_transf_3
Model size498
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K07141
KEGG ReactionR11582
KEGG Pathwayko00790,map00790
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.78e-48
EggNOG OGsCOG2068@1|root,COG2068@2|Bacteria,1MW0X@1224|Proteobacteria,1SCSV@1236|Gammaproteobacteria
EC2.7.7.76
DescriptionMobA-Related Protein
Cds size498
COG categoryS
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186838.8203013-CDS-P-wetherbeei_contig56423:1..4991683186838.8203013-CDS-P-wetherbeei_contig56423:1..499Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56423 2..499 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56423.1.1prot_P-wetherbeei_contig56423.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56423 2..499 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56423.1.1

>prot_P-wetherbeei_contig56423.1.1 ID=prot_P-wetherbeei_contig56423.1.1|Name=mRNA_P-wetherbeei_contig56423.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
LPDGTPIGVTSLRNLRSALPDVIAVVRSDDIRLCELLRKEGITVVLCDDA
AQGMARSLVCAVDASRDSDGWVIALGDMPFLLPQTIAMVAARTEQTGRIV
IPAYEGERGHPVGFGRRYRDELLALQGDEGARSVIARHRVDMDTIDCGDR
GILRDVDTPADLSRS*
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mRNA from alignment at P-wetherbeei_contig56423:2..499+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56423.1.1 ID=mRNA_P-wetherbeei_contig56423.1.1|Name=mRNA_P-wetherbeei_contig56423.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig56423:2..499+ (Phaeothamnion wetherbeei SAG_119_79)
CTGCCGGACGGTACGCCGATCGGGGTCACTTCACTACGTAATCTGCGAAG CGCATTGCCCGATGTGATCGCCGTGGTGCGCAGTGACGATATCCGGTTGT GCGAATTGCTGCGCAAGGAAGGGATAACCGTCGTTCTCTGTGATGATGCA GCCCAAGGCATGGCGCGCAGCCTCGTCTGCGCGGTCGACGCAAGCCGCGA TTCGGACGGCTGGGTGATCGCGCTGGGTGACATGCCCTTCTTGCTGCCGC AGACGATCGCCATGGTGGCCGCGCGTACTGAGCAGACCGGACGCATCGTG ATTCCGGCCTATGAAGGGGAACGCGGACATCCGGTCGGATTCGGGCGCCG CTACAGGGACGAACTACTCGCGCTACAAGGCGACGAAGGCGCCCGCTCGG TCATCGCGCGCCACCGCGTCGATATGGATACCATCGACTGCGGCGACCGC GGAATTCTGCGCGACGTTGATACGCCTGCCGACCTGAGCCGAAGTTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56423:2..499+

>mRNA_P-wetherbeei_contig56423.1.1 ID=mRNA_P-wetherbeei_contig56423.1.1|Name=mRNA_P-wetherbeei_contig56423.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig56423:2..499+ (Phaeothamnion wetherbeei SAG_119_79)
CTGCCGGACGGTACGCCGATCGGGGTCACTTCACTACGTAATCTGCGAAG
CGCATTGCCCGATGTGATCGCCGTGGTGCGCAGTGACGATATCCGGTTGT
GCGAATTGCTGCGCAAGGAAGGGATAACCGTCGTTCTCTGTGATGATGCA
GCCCAAGGCATGGCGCGCAGCCTCGTCTGCGCGGTCGACGCAAGCCGCGA
TTCGGACGGCTGGGTGATCGCGCTGGGTGACATGCCCTTCTTGCTGCCGC
AGACGATCGCCATGGTGGCCGCGCGTACTGAGCAGACCGGACGCATCGTG
ATTCCGGCCTATGAAGGGGAACGCGGACATCCGGTCGGATTCGGGCGCCG
CTACAGGGACGAACTACTCGCGCTACAAGGCGACGAAGGCGCCCGCTCGG
TCATCGCGCGCCACCGCGTCGATATGGATACCATCGACTGCGGCGACCGC
GGAATTCTGCGCGACGTTGATACGCCTGCCGACCTGAGCCGAAGTTAA
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