mRNA_P-wetherbeei_contig56396.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56396.1.1 vs. uniprot
Match: A0A7W0KE82_9CHLR (DNA starvation/stationary phase protection protein Dps n=2 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0KE82_9CHLR) HSP 1 Score: 127 bits (319), Expect = 1.390e-35 Identity = 63/84 (75.00%), Postives = 70/84 (83.33%), Query Frame = 1
Query: 10 ASKTKETTRTFPTANDLPEETREQVIALLNQQLADSLDLYSQTKQAHWNVKGMNFYQLHLLFDEHAAHVLPWIDMIAERAVMLG 261
AS K T R F T NDL ++ R Q I LLNQQLADSLDLYSQTKQAHWNVKG +FYQLHL+FDEHAAHV+ WID++AERAVMLG
Sbjct: 2 ASAKKSTVRAFATKNDLAKKVRTQAIDLLNQQLADSLDLYSQTKQAHWNVKGSDFYQLHLMFDEHAAHVVGWIDLVAERAVMLG 85
BLAST of mRNA_P-wetherbeei_contig56396.1.1 vs. uniprot
Match: A0A7W0PM85_9CHLR (DNA starvation/stationary phase protection protein Dps n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0PM85_9CHLR) HSP 1 Score: 120 bits (300), Expect = 1.060e-32 Identity = 59/80 (73.75%), Postives = 68/80 (85.00%), Query Frame = 1
Query: 22 KETTRTFPTANDLPEETREQVIALLNQQLADSLDLYSQTKQAHWNVKGMNFYQLHLLFDEHAAHVLPWIDMIAERAVMLG 261
K + RTF T NDL + R++VI LLNQQLADSLDLYSQTKQAHWNVKG +FYQLHL+FDEHA V+ WID++AERAVMLG
Sbjct: 6 KSSVRTFATKNDLDKGIRKRVIELLNQQLADSLDLYSQTKQAHWNVKGSDFYQLHLMFDEHAGLVVGWIDLLAERAVMLG 85
BLAST of mRNA_P-wetherbeei_contig56396.1.1 vs. uniprot
Match: A0A6J4VDI3_9CHLR (DNA protection during starvation protein n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4VDI3_9CHLR) HSP 1 Score: 116 bits (291), Expect = 2.440e-31 Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = 1
Query: 1 MATASKTKETTRTFPTANDLPEETREQVIALLNQQLADSLDLYSQTKQAHWNVKGMNFYQLHLLFDEHAAHVLPWIDMIAERAVMLG 261
M+TASK + R FP N LP+ T+ ++I LNQQLAD+LDLY+QTKQAHWNVKG +FYQLHLLFD HA H L W+D++AERA M+G
Sbjct: 1 MSTASKAQ--ARIFPNHNSLPDHTKTRMIETLNQQLADTLDLYAQTKQAHWNVKGKDFYQLHLLFDTHAEHALEWVDLLAERATMIG 85
BLAST of mRNA_P-wetherbeei_contig56396.1.1 vs. uniprot
Match: A0A7V1VZM1_9CHLR (DNA starvation/stationary phase protection protein Dps n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A7V1VZM1_9CHLR) HSP 1 Score: 105 bits (262), Expect = 5.380e-27 Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 1
Query: 28 TTRTFPTANDLPEETREQVIALLNQQLADSLDLYSQTKQAHWNVKGMNFYQLHLLFDEHAAHVLPWIDMIAERAVMLG 261
TTR +PT +DL TREQ++ALLNQQLAD+ DLYSQTKQAHWNVKG F QLH LFDE A V +IDM+AERA LG
Sbjct: 3 TTRVYPTRHDLSTTTREQMVALLNQQLADAFDLYSQTKQAHWNVKGPEFSQLHELFDELAEAVRGYIDMLAERATALG 80
BLAST of mRNA_P-wetherbeei_contig56396.1.1 vs. uniprot
Match: A0A7C7DTR5_9CHLR (DNA starvation/stationary phase protection protein Dps n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C7DTR5_9CHLR) HSP 1 Score: 105 bits (261), Expect = 7.410e-27 Identity = 53/77 (68.83%), Postives = 59/77 (76.62%), Query Frame = 1
Query: 31 TRTFPTANDLPEETREQVIALLNQQLADSLDLYSQTKQAHWNVKGMNFYQLHLLFDEHAAHVLPWIDMIAERAVMLG 261
T TF T NDLP+ TRE +I LLNQ LAD+ DLYSQTKQAHWNVKGM+F QLH LFD A VL ++D IAERA LG
Sbjct: 4 TTTFATRNDLPQTTRETIITLLNQHLADTFDLYSQTKQAHWNVKGMHFIQLHELFDALAGSVLGYVDEIAERATALG 80
BLAST of mRNA_P-wetherbeei_contig56396.1.1 vs. uniprot
Match: A0A2V8U4R7_9BACT (DNA starvation/stationary phase protection protein Dps n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8U4R7_9BACT) HSP 1 Score: 103 bits (258), Expect = 2.600e-26 Identity = 49/74 (66.22%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 40 FPTANDLPEETREQVIALLNQQLADSLDLYSQTKQAHWNVKGMNFYQLHLLFDEHAAHVLPWIDMIAERAVMLG 261
FPT DLP E R +I LLN++LAD++DLYSQ KQAHWNVKG+NF+QLH LFD+ A VLP++D IAERA LG
Sbjct: 12 FPTRIDLPSEDRTALIGLLNERLADTMDLYSQVKQAHWNVKGLNFFQLHELFDQLAGEVLPFVDQIAERATALG 85
BLAST of mRNA_P-wetherbeei_contig56396.1.1 vs. uniprot
Match: UPI0019E084FA (DNA starvation/stationary phase protection protein Dps n=1 Tax=Gloeomargaritaceae cyanobacterium C42_A2020_066 TaxID=2747801 RepID=UPI0019E084FA) HSP 1 Score: 102 bits (254), Expect = 9.180e-26 Identity = 48/74 (64.86%), Postives = 58/74 (78.38%), Query Frame = 1
Query: 40 FPTANDLPEETREQVIALLNQQLADSLDLYSQTKQAHWNVKGMNFYQLHLLFDEHAAHVLPWIDMIAERAVMLG 261
+P+ DLP ETR QV++LLNQ LAD+LDLY+Q KQAHWNVKG+NFYQLH LFD A V ++DM+AER LG
Sbjct: 10 YPSRIDLPAETRTQVVSLLNQTLADTLDLYTQVKQAHWNVKGLNFYQLHELFDTIAGEVAEYVDMVAERVTALG 83
BLAST of mRNA_P-wetherbeei_contig56396.1.1 vs. uniprot
Match: A0A7S7NN02_9BACT (DNA starvation/stationary phase protection protein Dps n=1 Tax=Paludibaculum fermentans TaxID=1473598 RepID=A0A7S7NN02_9BACT) HSP 1 Score: 100 bits (250), Expect = 3.790e-25 Identity = 48/74 (64.86%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 40 FPTANDLPEETREQVIALLNQQLADSLDLYSQTKQAHWNVKGMNFYQLHLLFDEHAAHVLPWIDMIAERAVMLG 261
FPT DLPE RE ++ LLN +LAD+ DLYSQ KQAHWNVKG NF+QLH LFD+ A + P+ID+IAERA LG
Sbjct: 11 FPTRIDLPEAEREPMVELLNARLADTADLYSQIKQAHWNVKGPNFFQLHTLFDQLAGEIFPFIDLIAERATALG 84
BLAST of mRNA_P-wetherbeei_contig56396.1.1 vs. uniprot
Match: A0A1M3KG07_9CHLR (DNA starvation/stationary phase protection protein Dps n=1 Tax=Chloroflexi bacterium 44-23 TaxID=1895927 RepID=A0A1M3KG07_9CHLR) HSP 1 Score: 100 bits (249), Expect = 5.230e-25 Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 40 FPTANDLPEETREQVIALLNQQLADSLDLYSQTKQAHWNVKGMNFYQLHLLFDEHAAHVLPWIDMIAERAVMLG 261
FPT D+PE RE+VI LLNQ LAD DL+SQTK AHWNVKG +FYQLH+LFDE A + P++D IAER LG
Sbjct: 11 FPTQVDIPERNRERVIDLLNQSLADIFDLHSQTKHAHWNVKGTDFYQLHILFDELAEMIFPYVDTIAERITALG 84
BLAST of mRNA_P-wetherbeei_contig56396.1.1 vs. uniprot
Match: A0A517QSZ6_9PLAN (DNA protection during starvation protein n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QSZ6_9PLAN) HSP 1 Score: 100 bits (249), Expect = 5.230e-25 Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 1
Query: 28 TTRTFPTANDLPEETREQVIALLNQQLADSLDLYSQTKQAHWNVKGMNFYQLHLLFDEHAAHVLPWIDMIAERAVMLG 261
T+ + T ND+ EETRE +I LLNQ LAD+ DLY+Q KQ+HWNVKGMNF QLHLLFD+ A + + + DMIAERA LG
Sbjct: 5 TSLNYQTHNDISEETRESMIELLNQHLADTFDLYTQVKQSHWNVKGMNFMQLHLLFDDLAENFIRYADMIAERATALG 82 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56396.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56396.1.1 >prot_P-wetherbeei_contig56396.1.1 ID=prot_P-wetherbeei_contig56396.1.1|Name=mRNA_P-wetherbeei_contig56396.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=87bp MATASKTKETTRTFPTANDLPEETREQVIALLNQQLADSLDLYSQTKQAHback to top mRNA from alignment at P-wetherbeei_contig56396:1..261- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56396.1.1 ID=mRNA_P-wetherbeei_contig56396.1.1|Name=mRNA_P-wetherbeei_contig56396.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=261bp|location=Sequence derived from alignment at P-wetherbeei_contig56396:1..261- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56396:1..261- >mRNA_P-wetherbeei_contig56396.1.1 ID=mRNA_P-wetherbeei_contig56396.1.1|Name=mRNA_P-wetherbeei_contig56396.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=261bp|location=Sequence derived from alignment at P-wetherbeei_contig56396:1..261- (Phaeothamnion wetherbeei SAG_119_79)back to top |