mRNA_P-wetherbeei_contig12516.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12516.1.1
Unique NamemRNA_P-wetherbeei_contig12516.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12516.1.1 vs. uniprot
Match: UPI001F02AFA4 (L,D-transpeptidase family protein n=1 Tax=Bradyrhizobium sp. G127 TaxID=2904800 RepID=UPI001F02AFA4)

HSP 1 Score: 497 bits (1279), Expect = 2.470e-172
Identity = 289/355 (81.41%), Postives = 306/355 (86.20%), Query Frame = 1
Query:    1 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRNNPNMAFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGATRPLAFNASAQCPAYQVPADVADAVQNKQRQDELKTAQLVTRGTATARSRAGIDGGMHPVFASKLPEGEAAIDKDVTDYAVASYLPAPGTVPSHATIPKAPEAAPSFSFTSSNINSEPTVA-VPAA--RSTPANANASASSSEGGFLSRLSRSVGLRGSDPEP--APAKPAAAPVAKAKSAPQ-SKAASTSAPPRVIPLDR-QQAKSETPAKPAXXXXXXXXXXXAPQQSLAGAQPAVPANSFDSRWSTLR 1044
            TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMT QNMARHRNNPNM FWKMIKEGNDHFEVT+QEPKVDFCE+KYVFDAEKPA ATRPLAFNASA CPAYQV  ++A+AVQ+KQR DELKTAQLV+RGT +ARSRAGIDGGMHPVFASKLPEGEAAIDKDVTDYAVASYLPAPGTVPSHATIPKAPE APSFSFTSSN  SEP VA +PAA  RS P+NANASA  SEG FL++LSRSVGLRGSDPEP  APAKPAA            S+ A+ SAPPRVIPL+R QQA+S           XXXXXXX  QQSLAGAQPAVPANSFDSRWST+R
Sbjct:  144 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTPQNMARHRNNPNMPFWKMIKEGNDHFEVTRQEPKVDFCERKYVFDAEKPANATRPLAFNASAPCPAYQVSPEIAEAVQDKQRTDELKTAQLVSRGTPSARSRAGIDGGMHPVFASKLPEGEAAIDKDVTDYAVASYLPAPGTVPSHATIPKAPETAPSFSFTSSN--SEPMVAAMPAAASRSAPSNANASAGPSEG-FLTKLSRSVGLRGSDPEPVAAPAKPAAVXXXXXXXXXXXSREAAKSAPPRVIPLERPQQAQSXX---------XXXXXXXXXQQSLAGAQPAVPANSFDSRWSTIR 486          
BLAST of mRNA_P-wetherbeei_contig12516.1.1 vs. uniprot
Match: K8P941_9BRAD (Uncharacterized protein n=5 Tax=Bacteria TaxID=2 RepID=K8P941_9BRAD)

HSP 1 Score: 494 bits (1272), Expect = 3.880e-171
Identity = 283/356 (79.49%), Postives = 303/356 (85.11%), Query Frame = 1
Query:    1 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRNNPNMAFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGATRPLAFNASAQCPAYQVPADVADAVQNKQRQDELKTAQLVTRGTATARSRAGIDGGMHPVFASKLPEGEAAIDKDVTDYAVASYLPAPGTVPSHATIPKAPEAAPSFSFTSSNINSEPTVAVPAARSTPANANASASSSEGGFLSRLSRSVGLRGSDPEPA--PAKPAAAPVA-KAKSAPQSKAASTSAPPRVIPLDRQQAKSETPAK-----PAXXXXXXXXXXXAPQQSLAGAQPAVPANSFDSRWSTLR 1044
            TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMT QNMARHRNNPNM FWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAG+TRPL FNASAQCPAYQV  ++A+AVQ KQRQDELKTAQL++RGTATARSRAGIDGGMHPVFASKLPEGEAAIDKDVTDYAVA+YLPAPGT+P+HAT+PKAPE APSFSFTSS+ NSEP VAV              SS   GFLS+LSRSVGLRGSDP+PA  PAKP A   A KAKS   ++ A+ S PPRVIPLDR Q +++ PAK     PA  XXXXXXXXX  Q SLAGAQPAV ANSFDSRWST+R
Sbjct:  144 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTPQNMARHRNNPNMPFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGSTRPLTFNASAQCPAYQVSPEIAEAVQEKQRQDELKTAQLISRGTATARSRAGIDGGMHPVFASKLPEGEAAIDKDVTDYAVAAYLPAPGTIPAHATLPKAPETAPSFSFTSSS-NSEPVVAVXXXXXXXXXXXXXXSSE--GFLSKLSRSVGLRGSDPQPAAAPAKPTAVTTAPKAKSPGPTREAAKSTPPRVIPLDRSQ-QAQAPAKXXXXAPATTXXXXXXXXXXXQPSLAGAQPAVQANSFDSRWSTVR 495          
BLAST of mRNA_P-wetherbeei_contig12516.1.1 vs. uniprot
Match: A0A4U6BR67_9BRAD (Murein L,D-transpeptidase n=5 Tax=Afipia TaxID=1033 RepID=A0A4U6BR67_9BRAD)

HSP 1 Score: 493 bits (1268), Expect = 1.470e-170
Identity = 277/353 (78.47%), Postives = 292/353 (82.72%), Query Frame = 1
Query:    1 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRNNPNMAFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGATRPLAFNASAQCPAYQVPADVADAVQNKQRQDELKTAQLVTRGTATARSRAGIDGGMHPVFASKLPEGEAAIDKDVTDYAVASYLPAPGTVPSHATIPKAPEAAPSFSFTSSNINSEPTVAVPAARSTPANANASA--SSSEGGFLSRLSRSVGLRGSDPEPAPAKPAAAPVAKAKSAPQSKAASTSAPPRVIPLDR-QQAKSETPAKPAXXXXXXXXXXXAP--QQSLAGAQPAVPANSFDSRWSTLR 1044
            TGSQLMVHGDCSSRGCYAMTDEQI+EIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRN+P+MAFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGATRPLAFNASAQCPAYQV  ++ADAVQNKQRQDELKTAQLV+RGT TARSRAGIDGGMHPVFASKLPEGE+AIDKDVTDYAVAS  PAPGTVPSHATIPKAPE APSFSFTSSN  SEP VAV                 SSEG F S+LSRSVGLRGSDPEPA AKPAAAP        +    + SAPPRVIPL+R QQA+++  AKPA          X    Q SLAGAQPAV ANSFDSRWST+R
Sbjct:  144 TGSQLMVHGDCSSRGCYAMTDEQITEIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRNSPHMAFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGATRPLAFNASAQCPAYQVSPEIADAVQNKQRQDELKTAQLVSRGTPTARSRAGIDGGMHPVFASKLPEGESAIDKDVTDYAVASNQPAPGTVPSHATIPKAPETAPSFSFTSSN--SEPMVAVTXXXXXXXXXXXXXXXGSSEG-FFSKLSRSVGLRGSDPEPAAAKPAAAPAKSXXXXXEPTKTAKSAPPRVIPLERPQQAQTQPQAKPASPAPAATTAAXXXXXQSSLAGAQPAVQANSFDSRWSTVR 493          
BLAST of mRNA_P-wetherbeei_contig12516.1.1 vs. uniprot
Match: K8NWX3_9BRAD (Uncharacterized protein n=4 Tax=Bradyrhizobiaceae TaxID=41294 RepID=K8NWX3_9BRAD)

HSP 1 Score: 463 bits (1192), Expect = 5.680e-159
Identity = 269/355 (75.77%), Postives = 294/355 (82.82%), Query Frame = 1
Query:    1 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRNNPNMAFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGATRPLAFNASAQCPAYQVPADVADAVQNKQRQDELKTAQLVTRGTATARSRAGIDGGMHPVFASKLPEGEAAIDKDVTDYAVASYLPAPGTVPSHATIPKAPEAAPS-FSFTSSNINSEPTVAVPAAR--STPANANASASSSEGGFLSRLSRSVGLRGSDPEPAPAKPAAAPVAKAKSAPQSKAAST-SAPPRVIPLDRQQAKSETPAKPAXXXXXXXXXXX---APQQSLAGAQPAVPANSFDSRWSTLR 1044
            TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRNNPNM FWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAG+TRPLAFNASAQCPAYQV  ++A+AVQ+KQRQDELKTAQL++RGTA ARSRAGIDGGMHP+FASKLPEG+AAID+DVTDYA+AS  PAPGTVP+HATIP+APE APS FSFTS   NSEP VAV +    +  A+ANASA++S  GF S+LSRSVGLRGS+P                        +  SAPPRVIPL+RQQA+        XXXXXXXXXXX   +  QSLAGAQPAVPANSFDSRWST+R
Sbjct:  143 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRNNPNMPFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGSTRPLAFNASAQCPAYQVSPEIAEAVQDKQRQDELKTAQLISRGTAMARSRAGIDGGMHPIFASKLPEGDAAIDRDVTDYAIASNGPAPGTVPAHATIPRAPEGAPSSFSFTSPGSNSEPMVAVTSTTMPAGTASANASAANSSEGFFSKLSRSVGLRGSEPAXXXXXXXXXXXXXXXXXXXXXXKTARSAPPRVIPLERQQAQXXXXXXXXXXXXXXXXXXXXXXSHPQSLAGAQPAVPANSFDSRWSTVR 497          
BLAST of mRNA_P-wetherbeei_contig12516.1.1 vs. uniprot
Match: A0A8I1RU48_9BRAD (Murein L,D-transpeptidase n=1 Tax=Afipia sp. TaxID=1871052 RepID=A0A8I1RU48_9BRAD)

HSP 1 Score: 462 bits (1188), Expect = 1.130e-158
Identity = 266/348 (76.44%), Postives = 286/348 (82.18%), Query Frame = 1
Query:    1 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRNNPNMAFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGATRPLAFNASAQCPAYQVPADVADAVQNKQRQDELKTAQLVTRGTATARSRAGIDGGMHPVFASKLPEGEAAIDKDVTDYAVASYLPAPGTVPSHATIPKAPEAAPSFSFTSSNINSEPTVAVPAARSTPANANASASSSEGGFLSRLSRSVGLRGSDPEPAPAKPAAAPVAKAKSAPQSKAASTSAPPRVIPLDRQQAKSETPAKPAXXXXXXXXXXXAPQQSLAGAQPAVPANSFDSRWSTLR 1044
            TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMT QNMAR+RNNPNM FWKMIKEGNDHFEVT+QEPKVDFCE+KYVFDAEKPA ATRPLAFNASAQCPAYQ+  +VA+AVQ KQR DELKTAQL++RG  TARSRAGIDGGMHP+FASKLPEGEAAIDKDVTDYA+ASY PAPGTVPSHATIP+APE A S  F+SS+  SEP VAVPA+      ++A   SSEG FLS+LSRSVGLRGSDP PAPA                   +    PRVIPL+RQQA         XXXXXXXXXXX  QQSLAGAQPAVPANSFDSRWST+R
Sbjct:  134 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTPQNMARYRNNPNMPFWKMIKEGNDHFEVTRQEPKVDFCERKYVFDAEKPANATRPLAFNASAQCPAYQIAPEVAEAVQEKQRSDELKTAQLISRGAPTARSRAGIDGGMHPIFASKLPEGEAAIDKDVTDYAIASYGPAPGTVPSHATIPRAPEPAESSIFSSSS--SEPMVAVPASAPRSTASSAGTESSEG-FLSKLSRSVGLRGSDPAPAPAARPXXXXXXXXXXXXXXXXAARTSPRVIPLERQQAXXXXXXX--XXXXXXXXXXXVQQQSLAGAQPAVPANSFDSRWSTVR 476          
BLAST of mRNA_P-wetherbeei_contig12516.1.1 vs. uniprot
Match: A0A1Q3W1K6_9BRAD (Uncharacterized protein n=1 Tax=Afipia sp. 64-13 TaxID=1895701 RepID=A0A1Q3W1K6_9BRAD)

HSP 1 Score: 369 bits (947), Expect = 4.250e-122
Identity = 221/356 (62.08%), Postives = 249/356 (69.94%), Query Frame = 1
Query:    1 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRNNPNMAFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGATRPLAFNASAQCPAYQVPADVADAVQNKQRQDELKTAQLVTRGTATARSRAGIDGGMHPVFASKLPEGEAAIDKDVTDYAVASYLPAPGTVPSHATIPKAPEAAPSFSFTSSNINSEPTVAVPAARSTPANANASASSSEGGFLSRLSRSVGLRGSDPEPAPAKPAAAPVAKAKSAPQSK--------AASTSAPPRVIPLDRQQAKSETPAKPAXXXXXXXXXXXAPQQSLAGAQPAVPANSFDSRWSTLR 1044
            TGSQLMVHGDCSSRGCYAMTDEQISEIY+LGRESFFGGQ AFQVQAYPFRMT QNMARHR+NPNM FWKMIKEGND+FEVTK EPKVDFCEKKYVF AEKPA A RP  FNASA+CP Y+VPAD+A+A++NK+R D+ K A+L++RGT  A+SRAGIDGGMHPVFASKLPE +     D TDY VASY PAPGT+PSH   P+ PE   +    +    +EPT   PA         AS+    GGF S L+  VGLR   PE   A    A  A                 +   +A PRVIPLDR         K AXXXXXXXXXX  P QS+AGAQP VP+N+FDSRWST R
Sbjct:  144 TGSQLMVHGDCSSRGCYAMTDEQISEIYSLGRESFFGGQTAFQVQAYPFRMTPQNMARHRDNPNMPFWKMIKEGNDYFEVTKLEPKVDFCEKKYVFGAEKPADAIRPPVFNASAKCPTYEVPADIAEAIKNKERADQSKFAELISRGTPMAKSRAGIDGGMHPVFASKLPEAQTIATSDATDYTVASYGPAPGTIPSHVNPPRLPEGVATADLVTP---AEPTA--PAXXXXXXXXTASS----GGFFSSLAAKVGLRRETPEQKTATTRTAKPAXXXXXXXXXXXXXXXXXSTPAAAAPRVIPLDRP--------KQAXXXXXXXXXXPTPPQSIAGAQPTVPSNTFDSRWSTFR 482          
BLAST of mRNA_P-wetherbeei_contig12516.1.1 vs. uniprot
Match: A0A3S0FSM2_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A3S0FSM2_9BRAD)

HSP 1 Score: 355 bits (910), Expect = 1.740e-116
Identity = 209/355 (58.87%), Postives = 252/355 (70.99%), Query Frame = 1
Query:    1 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRNNPNMAFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGATRPLAFNASAQCPAYQVPADVADAVQNKQRQDELKTAQLVTRGTATARSRAGIDGGMHPVFASKLPEGEAAIDKDVTDYAVASYLPAPGTVPSHATIPKAPEAAPSFSFTSSNINSEPTVAVPAARSTPANANASASSSEGGFLSRLSRSVGLRGSDPEPAPA-------KPAAAPVAKAKSAPQSKAASTSAPPRVIPLDRQQAKSETPAKPAXXXXXXXXXXXAPQQSLAGAQPAVPANSFDSRWSTLR 1044
            TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMT QNMAR+R+NPNM FW+MIKEGND+FEVTKQEPKVDFCEKKYVF A+ P G+ RPL FNASA+CPAY++P+D+A A+++KQR D+ K A+LV RGT  ++SRAGIDGGMHPVF +KLP+ ++    D TD+ V++Y PAPGT+PSH   P  PE  P  + T++ ++       P   ST A    ++ +  G F S L+  VGLRG+ PE APA       KPA AP  K+K  P++    T+   R                  XXXXXXXXXX  P QS+AGAQP  P N+FDSRWS+ R
Sbjct:  144 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTPQNMARNRDNPNMPFWRMIKEGNDYFEVTKQEPKVDFCEKKYVFGAQTPPGS-RPLVFNASARCPAYEIPSDIAQAIKDKQRSDDAKYAELVARGTPVSKSRAGIDGGMHPVFVNKLPDPQSVAMTDATDFTVSAYGPAPGTIPSHVNPPTRPET-PQVAETTNVMD-------PGPASTAAADTGNSGAVRGSFFSSLAAKVGLRGNKPEEAPAPQTTVAAKPAPAP--KSKPIPKTSNTETA---RASTTXXXXXXXXXXXXXXXXXXXXXXXXPTPPQSIAGAQPTGPGNTFDSRWSSFR 484          
BLAST of mRNA_P-wetherbeei_contig12516.1.1 vs. uniprot
Match: A0A1W9IB07_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium SG_bin9 TaxID=1827385 RepID=A0A1W9IB07_9PROT)

HSP 1 Score: 339 bits (870), Expect = 2.870e-110
Identity = 203/362 (56.08%), Postives = 248/362 (68.51%), Query Frame = 1
Query:    1 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRNNPNMAFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGATRPLAFNASAQCPAYQVPADVADAVQNKQRQDELKTAQLVTRGTATARSRAGIDGGMHPVFASKLPEGE--AAIDKDVTDYAVASYLPAPGTVPSHATIPKAPEA-APSFSFTSSNINSEPTVAVPAARSTPA-----------NANASASSSEGGFLSRLSRSVGLRGSDPEPAPAKPAAAPVAKAKSAPQSKAASTSAPPRVIPLDRQQAKSETPAKPAXXXXXXXXXXXAPQQSLAGAQPAVPANSFDSRWSTLR 1044
            TGSQLMVHGDCSSRGCYAMTDEQI+EIYALGRESFFGGQ AFQVQAYPFRMT QNMA+HR +P+M FW+MIK+G DHFEVT+QEPKVD C+K+YVFDA++PA +T+PL F   A CPAY++PA++ADAV++KQRQDE+KTA+L++RGT TARSRAGIDGGMHPVFA+KLP  +  A  DKD T YAVASY  APGT+PSH   P++P+  AP  +  S    SEP VAVPA  +  A                A++ + GF + ++  VGLR S PEP P  PA  P  K K   +  A+  +APP   P     A ++ PA          XXXX         QP V  +SF+SRW+  R
Sbjct:  144 TGSQLMVHGDCSSRGCYAMTDEQITEIYALGRESFFGGQRAFQVQAYPFRMTPQNMAKHRGSPHMPFWRMIKQGYDHFEVTRQEPKVDVCDKRYVFDAQQPANSTKPLNFRPEAACPAYEIPAEIADAVRDKQRQDEVKTAELISRGTPTARSRAGIDGGMHPVFANKLPNSDQIAMPDKD-TAYAVASYSSAPGTIPSHVNPPRSPDQPAPLINAMSPTGESEPYVAVPAGAARAAAXXXXXXXXXXXXXXXAAAEKPGFFASMAERVGLR-SAPEPKPLPPAPTPAQK-KDTSKLVASKPAAPPAPKPA---VAAADKPAS-TQSQQATAXXXXXXXXXXXXXQPVVQGSSFESRWTNFR 498          
BLAST of mRNA_P-wetherbeei_contig12516.1.1 vs. uniprot
Match: A0A0Q6YUW6_9BRAD (Uncharacterized protein n=1 Tax=Afipia sp. Root123D2 TaxID=1736436 RepID=A0A0Q6YUW6_9BRAD)

HSP 1 Score: 332 bits (851), Expect = 2.210e-107
Identity = 190/373 (50.94%), Postives = 251/373 (67.29%), Query Frame = 1
Query:    1 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRNNPNMAFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGATRPLAFNASAQCPAYQVPADVADAVQNKQRQDELKTAQLVTRGTATARSRAGIDGGMHPVFASKLPEGEAAIDKDVTDYAVASYLPAPGTVPSHATIPKAPE---AAPSFSFTSSNINSEPTVAVPAARSTPANANASASSSEGGFLSRLSRSVGLR-GSDPEPAPAKPAAAP---------------------VAKAKSAPQSKAASTSAPPRVIPLDRQQAKSETPAKPAXXXXXXXXXXXAPQQSLAGAQPAVPANSFDSRWSTLR 1044
            TGSQLMVHGDCSSRGCYAMTDEQISEIY+LGRESFFGGQ AFQVQAYPFRMTAQNMA++R+NPNM FW+M+KEGNDHFEV+K EPK+D CEK+YVFDAE+PA A+RPL FNA+ +CP Y+V  ++A AV  K+++D  K A+L++ G +  +SRAGIDGGMHPVFA+KLP+ ++    DV DYAV++   APGT+PSH   P+ PE   +A +F+ T +  +++        ++  A+  +SAS   GGF SRL++ VGLR  ++P+  PAKP                         VA+A   P++ AA      RVI L++QQA++ +                 P Q+++GA+  V ANSFD RWS+ R
Sbjct:  144 TGSQLMVHGDCSSRGCYAMTDEQISEIYSLGRESFFGGQTAFQVQAYPFRMTAQNMAKYRSNPNMPFWRMLKEGNDHFEVSKLEPKIDVCEKRYVFDAEQPANASRPLTFNAAGKCPVYEVNPEIAQAVAEKEQRDNAKVAELISHGVSAPKSRAGIDGGMHPVFANKLPDAQSIAIADVNDYAVSANGAAPGTIPSHVNPPRLPEGQVSAFTFASTPAAGSADTPXXXXXXKTETADTGSSAS---GGFFSRLAQKVGLRKDAEPKTEPAKPTTTARVIGXXXXXXXXXXXXXXXXSVARAAE-PKAPAA------RVISLEKQQAEARS------TFPDPVISRPTPPQTISGARSTVQANSFDQRWSSFR 500          
BLAST of mRNA_P-wetherbeei_contig12516.1.1 vs. uniprot
Match: B6JAC1_AFIC5 (Uncharacterized protein n=1 Tax=Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) TaxID=504832 RepID=B6JAC1_AFIC5)

HSP 1 Score: 324 bits (831), Expect = 1.370e-104
Identity = 193/361 (53.46%), Postives = 238/361 (65.93%), Query Frame = 1
Query:    1 TGSQLMVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTAQNMARHRNNPNMAFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGATRPLAFNASAQCPAYQVPADVADAVQNKQRQDELKTAQLVTRGTATARSRAGIDGGMHPVFASKLPEGEAAIDKDVTDYAVASYLPAPGTVPSHATIPKAPEAAPSFSFTSSNINSEPTVAVPAARSTPANANASASSSEGGFLSRLSRSVGLRGSDPEPAPAKPAAAP--------VAK---AKSAPQSKAASTSAPPRVIPLDRQQAKSETPAKPAXXXXXXXXXXXAP--QQSLAGAQPAVPANSFDSRWSTLR 1044
            TGSQLMVHGDCSSRGCYAMTDEQISEIY+LGRESFFGGQ AFQVQAYPFRMT QNMARHR+NPNMAFW+M+KEGND FEVT+ EPKVD CEKKYVFDAE P    RPL+F+ + +CPAYQ+   VA+A+Q K R D  K A+L++RG   A+SRAGIDGGMHPVFA+KLP+ ++    DV DYAV++  PAPGT+PSH   PKAPE      F +++ +S  +   P + +T    N           S L+R VG+   +P+                  VAK     S P+SK  +    PR+IPL R  A++   AKP            AP  QQ++AGAQPA P+ SF+SRWS+ +
Sbjct:  144 TGSQLMVHGDCSSRGCYAMTDEQISEIYSLGRESFFGGQTAFQVQAYPFRMTPQNMARHRDNPNMAFWRMLKEGNDIFEVTRTEPKVDVCEKKYVFDAE-PVPGGRPLSFSPTGKCPAYQLNPAVAEALQEKDRTDRSKLAELISRGAPVAKSRAGIDGGMHPVFATKLPDAQSIAVSDVNDYAVSANAPAPGTIPSHVNPPKAPEG-----FVTASTSSSDSDTTPESDTTAPKTN---------IFSTLARKVGIGRDEPQXXXXXXXXXXXXXXXXXXVAKNTTVTSTPESKPTA----PRIIPLSRT-AQAGAAAKPDAPAFPTPPAAIAPASQQTIAGAQPA-PSASFNSRWSSFQ 483          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12516.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001F02AFA42.470e-17281.41L,D-transpeptidase family protein n=1 Tax=Bradyrhi... [more]
K8P941_9BRAD3.880e-17179.49Uncharacterized protein n=5 Tax=Bacteria TaxID=2 R... [more]
A0A4U6BR67_9BRAD1.470e-17078.47Murein L,D-transpeptidase n=5 Tax=Afipia TaxID=103... [more]
K8NWX3_9BRAD5.680e-15975.77Uncharacterized protein n=4 Tax=Bradyrhizobiaceae ... [more]
A0A8I1RU48_9BRAD1.130e-15876.44Murein L,D-transpeptidase n=1 Tax=Afipia sp. TaxID... [more]
A0A1Q3W1K6_9BRAD4.250e-12262.08Uncharacterized protein n=1 Tax=Afipia sp. 64-13 T... [more]
A0A3S0FSM2_9BRAD1.740e-11658.87Uncharacterized protein n=1 Tax=Bradyrhizobiaceae ... [more]
A0A1W9IB07_9PROT2.870e-11056.08Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
A0A0Q6YUW6_9BRAD2.210e-10750.94Uncharacterized protein n=1 Tax=Afipia sp. Root123... [more]
B6JAC1_AFIC51.370e-10453.46Uncharacterized protein n=1 Tax=Afipia carboxidovo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12516contigP-wetherbeei_contig12516:931..1977 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog883078.HMPREF9695_03722
PFAMsYkuD
Model size1047
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.3e-168
EggNOG OGsCOG3034@1|root,COG3034@2|Bacteria,1MXY6@1224|Proteobacteria,2TS2U@28211|Alphaproteobacteria,3JTHD@41294|Bradyrhizobiaceae
DescriptionErfK YbiS YcfS YnhG family protein
Cds size1032
COG categoryNU
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185951.477344-CDS-P-wetherbeei_contig12516:930..19621683185951.477344-CDS-P-wetherbeei_contig12516:930..1962Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12516 931..1962 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185951.485575-UTR-P-wetherbeei_contig12516:1962..19771683185951.485575-UTR-P-wetherbeei_contig12516:1962..1977Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12516 1963..1977 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12516.1.1prot_P-wetherbeei_contig12516.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12516 931..1962 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12516.1.1

>prot_P-wetherbeei_contig12516.1.1 ID=prot_P-wetherbeei_contig12516.1.1|Name=mRNA_P-wetherbeei_contig12516.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=344bp
MVHGDCSSRGCYAMTDEQISEIYALGRESFFGGQNAFQVQAYPFRMTAQN
MARHRNNPNMAFWKMIKEGNDHFEVTKQEPKVDFCEKKYVFDAEKPAGAT
RPLAFNASAQCPAYQVPADVADAVQNKQRQDELKTAQLVTRGTATARSRA
GIDGGMHPVFASKLPEGEAAIDKDVTDYAVASYLPAPGTVPSHATIPKAP
EAAPSFSFTSSNINSEPTVAVPAARSTPANANASASSSEGGFLSRLSRSV
GLRGSDPEPAPAKPAAAPVAKAKSAPQSKAASTSAPPRVIPLDRQQAKSE
TPAKPAVAAAAPAAPAPAPQQSLAGAQPAVPANSFDSRWSTLR*
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mRNA from alignment at P-wetherbeei_contig12516:931..1977-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12516.1.1 ID=mRNA_P-wetherbeei_contig12516.1.1|Name=mRNA_P-wetherbeei_contig12516.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1047bp|location=Sequence derived from alignment at P-wetherbeei_contig12516:931..1977- (Phaeothamnion wetherbeei SAG_119_79)
ACCGGCTCTCAATTGATGGTTCACGGCGATTGCTCGTCGCGCGGCTGCTA CGCCATGACCGACGAACAGATTTCAGAAATTTACGCGTTGGGCCGCGAAT CCTTTTTCGGCGGCCAGAACGCCTTTCAGGTGCAGGCCTATCCGTTCCGC ATGACGGCGCAGAACATGGCCCGCCACCGCAACAATCCGAACATGGCGTT CTGGAAGATGATCAAGGAAGGCAACGATCACTTCGAGGTCACCAAGCAGG AGCCGAAGGTCGATTTCTGCGAGAAGAAATATGTCTTCGACGCGGAGAAG CCCGCCGGTGCAACCCGCCCGCTTGCCTTCAATGCATCCGCGCAGTGCCC GGCCTATCAGGTTCCGGCTGATGTCGCCGACGCCGTCCAGAACAAGCAGC GTCAGGACGAATTGAAGACCGCCCAACTGGTCACGCGCGGCACAGCGACG GCGCGTTCGCGCGCCGGCATCGACGGCGGCATGCATCCGGTGTTCGCCTC CAAGCTGCCGGAAGGCGAAGCTGCGATCGACAAGGACGTCACCGACTATG CGGTCGCGTCCTACCTGCCCGCACCGGGGACGGTCCCCTCGCATGCGACC ATTCCGAAAGCTCCGGAAGCAGCGCCATCCTTCAGCTTCACGTCATCCAA TATCAACAGCGAGCCGACAGTGGCCGTTCCGGCGGCGCGCAGCACGCCCG CTAACGCCAATGCCAGCGCCAGTTCGTCCGAAGGCGGCTTCCTCAGCCGT CTGTCACGCTCCGTCGGCCTGCGCGGGTCGGATCCTGAGCCTGCACCGGC GAAACCTGCCGCAGCTCCGGTTGCGAAGGCGAAATCCGCTCCGCAGAGCA AGGCCGCCAGCACGAGCGCGCCTCCAAGGGTGATTCCTCTTGATCGCCAG CAAGCGAAGTCCGAGACCCCAGCCAAGCCCGCCGTCGCGGCTGCCGCTCC TGCTGCCCCGGCTCCGGCGCCGCAGCAGTCGCTGGCCGGCGCGCAACCCG CCGTACCGGCAAATTCATTCGACAGCCGCTGGTCCACCCTCCGCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12516:931..1977-

>mRNA_P-wetherbeei_contig12516.1.1 ID=mRNA_P-wetherbeei_contig12516.1.1|Name=mRNA_P-wetherbeei_contig12516.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1032bp|location=Sequence derived from alignment at P-wetherbeei_contig12516:931..1977- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTTCACGGCGATTGCTCGTCGCGCGGCTGCTACGCCATGACCGACGA
ACAGATTTCAGAAATTTACGCGTTGGGCCGCGAATCCTTTTTCGGCGGCC
AGAACGCCTTTCAGGTGCAGGCCTATCCGTTCCGCATGACGGCGCAGAAC
ATGGCCCGCCACCGCAACAATCCGAACATGGCGTTCTGGAAGATGATCAA
GGAAGGCAACGATCACTTCGAGGTCACCAAGCAGGAGCCGAAGGTCGATT
TCTGCGAGAAGAAATATGTCTTCGACGCGGAGAAGCCCGCCGGTGCAACC
CGCCCGCTTGCCTTCAATGCATCCGCGCAGTGCCCGGCCTATCAGGTTCC
GGCTGATGTCGCCGACGCCGTCCAGAACAAGCAGCGTCAGGACGAATTGA
AGACCGCCCAACTGGTCACGCGCGGCACAGCGACGGCGCGTTCGCGCGCC
GGCATCGACGGCGGCATGCATCCGGTGTTCGCCTCCAAGCTGCCGGAAGG
CGAAGCTGCGATCGACAAGGACGTCACCGACTATGCGGTCGCGTCCTACC
TGCCCGCACCGGGGACGGTCCCCTCGCATGCGACCATTCCGAAAGCTCCG
GAAGCAGCGCCATCCTTCAGCTTCACGTCATCCAATATCAACAGCGAGCC
GACAGTGGCCGTTCCGGCGGCGCGCAGCACGCCCGCTAACGCCAATGCCA
GCGCCAGTTCGTCCGAAGGCGGCTTCCTCAGCCGTCTGTCACGCTCCGTC
GGCCTGCGCGGGTCGGATCCTGAGCCTGCACCGGCGAAACCTGCCGCAGC
TCCGGTTGCGAAGGCGAAATCCGCTCCGCAGAGCAAGGCCGCCAGCACGA
GCGCGCCTCCAAGGGTGATTCCTCTTGATCGCCAGCAAGCGAAGTCCGAG
ACCCCAGCCAAGCCCGCCGTCGCGGCTGCCGCTCCTGCTGCCCCGGCTCC
GGCGCCGCAGCAGTCGCTGGCCGGCGCGCAACCCGCCGTACCGGCAAATT
CATTCGACAGCCGCTGGTCCACCCTCCGCTAG
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