mRNA_P-wetherbeei_contig56212.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56212.1.1 vs. uniprot
Match: A0A7C2XNK8_9CHLR (Response regulator n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C2XNK8_9CHLR) HSP 1 Score: 94.7 bits (234), Expect = 1.550e-22 Identity = 55/115 (47.83%), Postives = 72/115 (62.61%), Query Frame = 1
Query: 10 LVVEDHAATRMAVMALLAGAFPGCRLIGADSAEVALPLCEREAPRVVIMDIALPGMNGIEATRLIKARHPGIRVVMHSSNDMQIFRDESVAVGASAFVGKGTRSGELVPVLAGLL 354
L+VEDHAA R + LL AFPG ++ A SAE AL L P +V+MDI LPGMNGI+ATR +K+ P RVVM S + ++ ++ GASA++ K T ELVP + LL
Sbjct: 18 LIVEDHAALRAGLCELLGLAFPGHEILEAGSAEEALNLAFITRPEIVLMDIGLPGMNGIQATRQLKSHLPHTRVVMISIQETDHYQSAALQAGASAYLFKRTLHSELVPTVMKLL 132
BLAST of mRNA_P-wetherbeei_contig56212.1.1 vs. uniprot
Match: A0A7C2WIR2_9CHLR (Response regulator n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7C2WIR2_9CHLR) HSP 1 Score: 90.5 bits (223), Expect = 5.580e-21 Identity = 51/116 (43.97%), Postives = 76/116 (65.52%), Query Frame = 1
Query: 7 ILVVEDHAATRMAVMALLAGAFPGCRLIGADSAEVALPLCEREAPRVVIMDIALPGMNGIEATRLIKARHPGIRVVMHSSNDMQIFRDESVAVGASAFVGKGTRSGELVPVLAGLL 354
IL+VED+ + R ++ L GAFP + I A + E A+ + + +AP VIMDI LPGMNGIE TR IKA P +VV+ + ++ + FR+++ + GASA+V K +L+P LA +L
Sbjct: 6 ILIVEDNNSVRKSLRQWLEGAFPKYQFIEAATGEQAIAITQEQAPCAVIMDIRLPGMNGIETTRHIKATMPTTQVVILTIHEEKAFRNDAASAGASAYVPKRIMRKKLLPALAAVL 121
BLAST of mRNA_P-wetherbeei_contig56212.1.1 vs. uniprot
Match: A0A7C1M6R8_9GAMM (Response regulator n=2 Tax=root TaxID=1 RepID=A0A7C1M6R8_9GAMM) HSP 1 Score: 90.1 bits (222), Expect = 9.760e-21 Identity = 54/116 (46.55%), Postives = 69/116 (59.48%), Query Frame = 1
Query: 7 ILVVEDHAATRMAVMALLAGAFPGCRLIGADSAEVALPLCEREAPRVVIMDIALPGMNGIEATRLIKARHPGIRVVMHSSNDMQIFRDESVAVGASAFVGKGTRSGELVPVLAGLL 354
ILVVEDH R V LA FP CR++ A E A+ L E+PRVV+ I+LPGMNGI+ R IKA P VM + ++ Q +R E+ GASA+V K EL+P +A LL
Sbjct: 13 ILVVEDHDTLRKFVREWLALEFPCCRVVAASCGEEAIALTRIESPRVVVTGISLPGMNGIDVVRQIKAILPCAHFVMLTIHEEQAYRAEATLAGASAYVPKRLILTELIPAIAALL 128
BLAST of mRNA_P-wetherbeei_contig56212.1.1 vs. uniprot
Match: A0A7V5ZKP3_9BACT (Response regulator n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V5ZKP3_9BACT) HSP 1 Score: 88.6 bits (218), Expect = 4.580e-20 Identity = 52/118 (44.07%), Postives = 72/118 (61.02%), Query Frame = 1
Query: 1 AAILVVEDHAATRMAVMALLAGAFPGCRLIGADSAEVALPLCEREAPRVVIMDIALPGMNGIEATRLIKARHPGIRVVMHSSNDMQIFRDESVAVGASAFVGKGTRSGELVPVLAGLL 354
A IL+V+DH A R ++ + L A P A + E AL + P +V+MDI LPGM+GIEATR I A PG+ VV+ S +D + +R ++ A GA+AFV K EL+P+L LL
Sbjct: 19 ATILIVDDHPAVRRSLRSWLVKALPTYEFSEAVNGEEALARLGEQRPALVLMDINLPGMSGIEATRRITATAPGVPVVIVSMHDTEAYRQDAAAAGAAAFVAKERMGFELLPLLQRLL 136
BLAST of mRNA_P-wetherbeei_contig56212.1.1 vs. uniprot
Match: A0A7C3BB05_9CHLR (Response regulator transcription factor n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7C3BB05_9CHLR) HSP 1 Score: 88.2 bits (217), Expect = 5.840e-20 Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = 1
Query: 7 ILVVEDHAATRMAVMALLAGAFPGCRLIGADSAEVALPLCEREAPRVVIMDIALPGMNGIEATRLIKARHPGIRVVMHSSNDMQIFRDESVAVGASAFVGKGTRSGELVPVLAGLL 354
IL+V+DH A R A+ L P C+ A SAE AL L + P VV+MDI LPGMNG+EATR +K P VV+ + ++ ++ ++ A GASA+V K EL+P++A L+
Sbjct: 14 ILIVDDHEAVRAALREWLGTVLPNCQYQEASSAEEALALVQARPPTVVLMDIQLPGMNGVEATRRLKQIAPRTHVVIMTIHENPEYQADARAAGASAYVLKRMLGSELIPIMARLV 129
BLAST of mRNA_P-wetherbeei_contig56212.1.1 vs. uniprot
Match: A0A7C4QLK5_9CHLR (Response regulator n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C4QLK5_9CHLR) HSP 1 Score: 86.7 bits (213), Expect = 2.400e-19 Identity = 48/116 (41.38%), Postives = 69/116 (59.48%), Query Frame = 1
Query: 7 ILVVEDHAATRMAVMALLAGAFPGCRLIGADSAEVALPLCEREAPRVVIMDIALPGMNGIEATRLIKARHPGIRVVMHSSNDMQIFRDESVAVGASAFVGKGTRSGELVPVLAGLL 354
IL+VEDH TR V L FP R + + E AL ++ P++V+MD+ +PGM GIEATR IK PG +VV+ S ++ ++A GASA++ K + EL+P+L LL
Sbjct: 20 ILIVEDHVRTREVVRDWLGFVFPQARFVEVGTGEEALAAVAKQPPQLVLMDVEMPGMKGIEATRRIKLLAPGTQVVILSIYQAPEYQSAAIAAGASAYLPKASMHTELIPLLRTLL 135
BLAST of mRNA_P-wetherbeei_contig56212.1.1 vs. uniprot
Match: UPI0019F898AF (Response regulator transcription factor n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019F898AF) HSP 1 Score: 86.7 bits (213), Expect = 3.500e-19 Identity = 54/116 (46.55%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 7 ILVVEDHAATRMAVMALLAGAFPGCRLIGADSAEVALPLCEREAPRVVIMDIALPGMNGIEATRLIKARHPGIRVVMHSSNDMQIFRDESVAVGASAFVGKGTRSGELVPVLAGLL 354
IL+VEDH A R V L F CR + A S E A+ L + P +VIMDI LP MNGIE TR IKA P +VVM + D F ++ A GASA+V K +L+P +A LL
Sbjct: 33 ILIVEDHDAVRTHVRDWLNRTFTECRFLEAKSGEEAIALASAQPPDIVIMDIGLPRMNGIETTRHIKAAVPQAQVVMLTIYDAADFMADADAAGASAYVPKSEVGSKLIPEVARLL 148
BLAST of mRNA_P-wetherbeei_contig56212.1.1 vs. uniprot
Match: A0A1F9N2M9_9DELT (Response regulatory domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A1F9N2M9_9DELT) HSP 1 Score: 84.0 bits (206), Expect = 2.100e-18 Identity = 48/116 (41.38%), Postives = 69/116 (59.48%), Query Frame = 1
Query: 7 ILVVEDHAATRMAVMALLAGAFPGCRLIGADSAEVALPLCEREAPRVVIMDIALPGMNGIEATRLIKARHPGIRVVMHSSNDMQIFRDESVAVGASAFVGKGTRSGELVPVLAGLL 354
I++V+DHA R + L FPG ++ A++AE L + P VV+MD +LPGMNGI+ATR ++A P ++VVM + D R + GA+A+V K +L PVLA LL
Sbjct: 5 IMIVDDHAEMRGVLREWLVARFPGESIVEAETAEQGLAMAVAADPDVVVMDFSLPGMNGIDATRRLRAMSPRVQVVMLTIWDSPSLRAAAAKAGAAAYVTKDRVDQDLAPVLARLL 120
BLAST of mRNA_P-wetherbeei_contig56212.1.1 vs. uniprot
Match: A0A7Y8HU24_9BACT (Response regulator transcription factor n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7Y8HU24_9BACT) HSP 1 Score: 83.2 bits (204), Expect = 4.000e-18 Identity = 48/112 (42.86%), Postives = 67/112 (59.82%), Query Frame = 1
Query: 7 ILVVEDHAATRMAVMALLAGAFPGCRLIGADSAEVALPLCEREAPRVVIMDIALPGMNGIEATRLIKARHPGIRVVMHSSNDMQIFRDESVAVGASAFVGKGTRSGELVPVL 342
+L+VEDH A R ++ L+ FP + A S E AL L + P +V+MDI LP M+GIEATR IK P +V+ S D ++ E++A GASA+V K ELVP++
Sbjct: 11 LLIVEDHDALRESLQKWLSTFFPELDFLEAGSGEDALNLVKEHKPGIVLMDIKLPQMSGIEATRQIKEMLPDTNIVILSMYDFIDYKTEALAAGASAYVAKNRMYSELVPII 122
BLAST of mRNA_P-wetherbeei_contig56212.1.1 vs. uniprot
Match: A0A524GGR4_9BACT (Response regulator transcription factor n=1 Tax=Nitrospirales bacterium TaxID=2358460 RepID=A0A524GGR4_9BACT) HSP 1 Score: 82.8 bits (203), Expect = 7.680e-18 Identity = 49/118 (41.53%), Postives = 69/118 (58.47%), Query Frame = 1
Query: 1 AAILVVEDHAATRMAVMALLAGAFPGCRLIGADSAEVALPLCEREAPRVVIMDIALPGMNGIEATRLIKARHPGIRVVMHSSNDMQIFRDESVAVGASAFVGKGTRSGELVPVLAGLL 354
A IL+VEDH A R ++ L+ F C L+ A + E AL L P++V+MDI LP M+GIE TR IK P +VVM S + ++ ++ A GA A++ K E+VPV+ LL
Sbjct: 12 ATILIVEDHDALRDSLKTWLSAIFQDCILLQAKTGEEALELSRAHLPQIVLMDIMLPAMSGIETTRHIKGVVPDAQVVMLSIYEDSAYKIDAAAAGAVAYISKRKMGTEIVPVIKKLL 129 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56212.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56212.1.1 >prot_P-wetherbeei_contig56212.1.1 ID=prot_P-wetherbeei_contig56212.1.1|Name=mRNA_P-wetherbeei_contig56212.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp AAILVVEDHAATRMAVMALLAGAFPGCRLIGADSAEVALPLCEREAPRVVback to top mRNA from alignment at P-wetherbeei_contig56212:17..373+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56212.1.1 ID=mRNA_P-wetherbeei_contig56212.1.1|Name=mRNA_P-wetherbeei_contig56212.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig56212:17..373+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56212:17..373+ >mRNA_P-wetherbeei_contig56212.1.1 ID=mRNA_P-wetherbeei_contig56212.1.1|Name=mRNA_P-wetherbeei_contig56212.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=357bp|location=Sequence derived from alignment at P-wetherbeei_contig56212:17..373+ (Phaeothamnion wetherbeei SAG_119_79)back to top |