mRNA_P-wetherbeei_contig12511.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12511.1.1
Unique NamemRNA_P-wetherbeei_contig12511.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12511.1.1 vs. uniprot
Match: A0A6J4VXX6_9CHLR (Methyltransf_25 domain-containing protein n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4VXX6_9CHLR)

HSP 1 Score: 160 bits (404), Expect = 1.470e-46
Identity = 76/179 (42.46%), Postives = 114/179 (63.69%), Query Frame = 1
Query:   10 ITAFLRDWRTTGSLVPSSRFLQEGMMARIPFGRVQTVIELGPGTGVITQAILNRLSPTGKLLAVDINEDFITRLRNQFNDPRLIPLHASATELPALLAAQGLSHADCVVSGLPFASLPATLRREIIESSVKCLGRRGLFVAFQYAPFALPPLLKEHFRDIRTDFVVLNVPPALVYSCRK 546
            + +FLRDWRT GS+ PSS++L   M+  + F R + ++E GPGTGV T  I+ RL+P G+LL +D    FI  LR +  DPRL+ +  SA  +   +AA G   AD ++SG+P+ ++P  LR EI+ +S + L   GLF A+QY+P+ + PLL + F  + T +V  N+PPA  ++CR 
Sbjct:   13 LRSFLRDWRTIGSVTPSSQYLVRAMLDGVDFERARRIVEYGPGTGVFTTEIMRRLAPDGQLLTLDTEAHFIDALRERLPDPRLVAVRGSAARIERHVAALGWRGADVIISGIPYTAMPPDLRVEILRASARALAPGGLFTAYQYSPY-IRPLLGQLFGRVETRWVPRNLPPAFFFACRN 190          
BLAST of mRNA_P-wetherbeei_contig12511.1.1 vs. uniprot
Match: A0A7V8VQD1_9BACT (Methyltransferase domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7V8VQD1_9BACT)

HSP 1 Score: 147 bits (371), Expect = 1.750e-41
Identity = 71/174 (40.80%), Postives = 108/174 (62.07%), Query Frame = 1
Query:   19 FLRDWRTTGSLVPSSRFLQEGMMARIPFGRVQTVIELGPGTGVITQAILNRLSPTGKLLAVDINEDFITRLRNQFNDPRLIPLHASATELPALLAAQGLSHADCVVSGLPFASLPATLRREIIESSVKCLGRRGLFVAFQYAPFALPPLLKEHFRDIRTDFVVLNVPPALVYSC 540
            F +  R  GSL+PSSRFL + ++ +I + R + ++E GPG G IT  IL RL P GK++  + N +F+  LR    DPRL  +H SA  +  +L   G  HAD V+SG+PF+++P  +R  I+ ++   L  +G F+ +Q++P  LP  LK+ FR++R DF  LN+ PA +Y C
Sbjct:   23 FFKHPRMLGSLIPSSRFLTKELLKQIDWKRARVIVEYGPGVGNITTEILRRLRPGGKMIVFETNAEFVEFLRESLRDPRLHVVHGSAERIGEVLQQLGFDHADYVISGIPFSTMPEEVRARILRNTRTALNPQGRFLVYQFSPAVLP-YLKQSFREVRKDFEPLNILPAWLYFC 195          
BLAST of mRNA_P-wetherbeei_contig12511.1.1 vs. uniprot
Match: A0A556N6H5_9FLAO (Methyltransferase domain-containing protein n=1 Tax=Fluviicola chungangensis TaxID=2597671 RepID=A0A556N6H5_9FLAO)

HSP 1 Score: 144 bits (363), Expect = 1.990e-40
Identity = 70/179 (39.11%), Postives = 110/179 (61.45%), Query Frame = 1
Query:   10 ITAFLRDWRTTGSLVPSSRFLQEGMMARIPFGRVQTVIELGPGTGVITQAILNRLSPTGKLLAVDINEDFITRLRNQFNDPRLIPLHASATELPALLAAQGLSHADCVVSGLPFASLPATLRREIIESSVKCLGRRGLFVAFQYAPFALPPLLKEHFRDIRTDFVVLNVPPALVYSCRK 546
            I  F ++ +  G++ PSS++L + M+ +I F   + ++ELGPGTGV T+ IL +LSP G LL  ++N+ FI +L+ +F DPR+I +H SA ++   L   G S AD VVS LP A+ P+ L+  I++ S + +    L+V FQY+  A   + K+ F+ +   F   N PPA +Y C+K
Sbjct:    8 IRNFWKERKMVGAMAPSSKYLAKKMLQKIDFSTAKVIVELGPGTGVFTRKILQKLSPDGILLVFELNDSFIKQLKKEFKDPRVILIHDSAEKIGEYLEKNGYSQADAVVSSLPLANFPSDLKNRILKESHRVMHSNSLYVQFQYSLNAKKNI-KQFFKHMEIAFTPANFPPAFIYYCKK 185          
BLAST of mRNA_P-wetherbeei_contig12511.1.1 vs. uniprot
Match: A0A7V4Z076_9BACT (Methyltransferase domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V4Z076_9BACT)

HSP 1 Score: 141 bits (356), Expect = 2.940e-39
Identity = 72/175 (41.14%), Postives = 105/175 (60.00%), Query Frame = 1
Query:   22 LRDWRTTGSLVPSSRFLQEGMMARIPFGRVQTVIELGPGTGVITQAILNRLSPTGKLLAVDINEDFITRLRNQFNDPRLIPLHASATELPALLAAQGLSHADCVVSGLPFASLPATLRREIIESSVKCLGRRGLFVAFQYAPFALPPLLKEHFRDIRTDFVVLNVPPALVYSCRK 546
            +R+ R+TGS+ PSSRFL   ++A+I   + + V+ELGPG GVIT+ IL+RL P  +L+  +INE F+ ++R  F+DPRL  +H SA  + A      +  ADC+VSG+PF  LP  L R I       L  +G F+ F Y+P  L    +  F +   + V LN+PPA++  C K
Sbjct:   18 IRNLRSTGSVAPSSRFLSRAIVAKIDPEQAKIVVELGPGDGVITRYILDRLLPDARLIIFEINEIFVEKIRAAFDDPRLTVIHDSAENMGAHFKEMKIKKADCIVSGIPFVMLPEPLTRRIALECRHWLRSKGRFIQFHYSPLLLG-FYRRVFGNAEVEVVPLNIPPAIIVCCEK 191          
BLAST of mRNA_P-wetherbeei_contig12511.1.1 vs. uniprot
Match: A0A1L3ZTZ3_9SPHN (Methyltransferase n=1 Tax=Tardibacter chloracetimidivorans TaxID=1921510 RepID=A0A1L3ZTZ3_9SPHN)

HSP 1 Score: 141 bits (356), Expect = 3.920e-39
Identity = 75/172 (43.60%), Postives = 109/172 (63.37%), Query Frame = 1
Query:   19 FLRDWRTTGSLVPSSRFLQEGMMARIPFGRVQTVIELGPGTGVITQAILNRLSPTGKLLAVDINEDFITRLRNQFNDPRLIPLHASATELPALLAAQGLSHADCVVSGLPFASLPATLRREIIESSVKCLGRRGLFVAFQYAPFALPPLLKEHFRDIRTDFVVLNVPPALVY 534
            FL++    GS++PSSRFL E ++A + +GR    +E GPG G IT+ IL+RL P  KL+AVD N DF   LR++F DPRLI  + SA +L  +LA  G   AD V+SGLPF++LPA +   I++++   L   G+F+ +Q++P  +   L+  F  I   F  LNVPPA ++
Sbjct:   30 FLKNPVMVGSVIPSSRFLIEKILAPVNWGRADVFVEFGPGVGTITKPILDRLKPDAKLIAVDTNADFCEYLRHEFADPRLIVANRSAADLGKILADNGCEGADYVISGLPFSTLPAGVGPAIVKATRSSLKPGGIFLVYQFSP-KVGDYLRAEFDHIDRGFEALNVPPAQLF 200          
BLAST of mRNA_P-wetherbeei_contig12511.1.1 vs. uniprot
Match: UPI001FECB9C9 (methyltransferase domain-containing protein n=1 Tax=Sphingobium xanthum TaxID=1387165 RepID=UPI001FECB9C9)

HSP 1 Score: 140 bits (352), Expect = 6.030e-39
Identity = 73/170 (42.94%), Postives = 107/170 (62.94%), Query Frame = 1
Query:   43 GSLVPSSRFLQEGMMARIPFGRVQTVIELGPGTGVITQAILNRLSPTGKLLAVDINEDFITRLRNQFNDPRLIPLHASATELPALLAAQGLSHADCVVSGLPFASLPATLRREIIESSVKCLGRRGLFVAFQYAPFALPPLLKEHFRDIRTDFVVLNVPPALVYSCRKPA 552
            GS+VP+SR     ++  + +   +  +E GPGTGV TQAIL RL P G+L+A+D N  FI  LR Q  D RLI +  SAT++ A++AA G + AD VVSGLPF++LP ++   I++++ + +   G F+ +QY+ F LP LLK  F  +    V+  VPPA ++  RK A
Sbjct:    3 GSIVPTSRVAIRALLDPVDWRAARCAVEYGPGTGVFTQAILRRLGPDGRLIAIDTNATFIALLREQIADERLICVEGSATDVEAIVAAHGFTAADYVVSGLPFSTLPRSVADAIMDATARVIAPGGAFLVYQYSLFVLP-LLKRRFARVGKGVVMRCVPPARLFWARKAA 171          
BLAST of mRNA_P-wetherbeei_contig12511.1.1 vs. uniprot
Match: UPI001FD88824 (methyltransferase domain-containing protein n=1 Tax=Sphingobium sp. Sx8-8 TaxID=2933617 RepID=UPI001FD88824)

HSP 1 Score: 140 bits (353), Expect = 6.240e-39
Identity = 70/176 (39.77%), Postives = 105/176 (59.66%), Query Frame = 1
Query:   22 LRDWRTTGSLVPSSRFLQEGMMARIPFGRVQTVIELGPGTGVITQAILNRLSPTGKLLAVDINEDFITRLRNQFNDPRLIPLHASATELPALLAAQGLSHADCVVSGLPFASLPATLRREIIESSVKCLGRRGLFVAFQYAPFALPPLLKEHFRDIRTDFVVLNVPPALVYSCRKP 549
            +R     GS  P+SRFL + M+A + + R+  V+E GPGTG+ T+A+L RL    ++LA+D +  FI  LR + +D RLI +  SA  +  ++A  G+  ADC++SGLPF++LP      +++ S + L   GLF+A+Q    A+ PLL  HF  + T F   NVPP  +Y  R P
Sbjct:    1 MRSPLAVGSAFPASRFLVDSMLAPVDWNRIGCVVEYGPGTGIFTRALLERLPGNARILAIDTSAAFIDHLREEMDDRRLIAVRGSADHVQRIMADHGVEQADCIISGLPFSTLPPDRAARLMDVSHRSLSPDGLFLAYQMRR-AIAPLLHRHFATVETGFEWRNVPPCHLYWARSP 175          
BLAST of mRNA_P-wetherbeei_contig12511.1.1 vs. uniprot
Match: A0A2N5K072_9CHLR (Phospholipid methyltransferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2N5K072_9CHLR)

HSP 1 Score: 139 bits (350), Expect = 2.430e-38
Identity = 76/180 (42.22%), Postives = 108/180 (60.00%), Query Frame = 1
Query:   10 ITAFLRDWRTTGSLVPSSRFLQEGMMARIPFGRVQTVIELGPGTGVITQAILNRLSPTGKLLAVDINEDFITRLRNQFNDPRLIPLHASATELPALLAAQGLSHADCVVSGLPFASLPATLRREIIESSVKCLGRRGLFVAFQYAPFALPPLLKEHFRDIR-TDFVVLNVPPALVYSCRK 546
            +  F+R  R+ GS+ PSSR+L + M+A       + V+E G GTGV T A+L RL P  +LL  +IN +F   L+ +  D R+  LHASA E+   +   GLS  DC+VSGLPF SLP ++   I++++   L   G+FV +QY P  L  +L  +F   R T  V+ N+PPALV+ CRK
Sbjct:   15 VKGFIRSPRSVGSIAPSSRWLVKAMLAEAQVEAAKVVVEFGAGTGVFTLAMLRRLRPDARLLVFEINPEFHRDLQARITDGRVEVLHASAAEIDYHIERLGLSAPDCIVSGLPFTSLPRSVTHAILQATYATLKPGGVFVTYQYTPL-LRRVLASYFDTTRITRLVLRNLPPALVFVCRK 193          
BLAST of mRNA_P-wetherbeei_contig12511.1.1 vs. uniprot
Match: UPI0003A02F8B (methyltransferase domain-containing protein n=1 Tax=Sphingobium bisphenolivorans TaxID=1335760 RepID=UPI0003A02F8B)

HSP 1 Score: 137 bits (346), Expect = 5.790e-38
Identity = 70/169 (41.42%), Postives = 105/169 (62.13%), Query Frame = 1
Query:   43 GSLVPSSRFLQEGMMARIPFGRVQTVIELGPGTGVITQAILNRLSPTGKLLAVDINEDFITRLRNQFNDPRLIPLHASATELPALLAAQGLSHADCVVSGLPFASLPATLRREIIESSVKCLGRRGLFVAFQYAPFALPPLLKEHFRDIRTDFVVLNVPPALVYSCRKP 549
            GS  P+SR++ + M+A I + RV+TV+E GPGTGV T+A+L+RL    +LLA+D +E FI  LR    D RLI     ATE+  +++A GL   DC++SGLPF+++P  +   I+++S + L   G F+A+Q    A+ PLL+ HF  +   F   N+PP  +Y    P
Sbjct:    4 GSAFPASRYMVDAMLAPIDWRRVRTVVEFGPGTGVFTRALLDRLPRDARLLALDTSEGFIGHLRATIPDSRLIAAAGCATEIRRIMSAHGLEQVDCILSGLPFSTVPPEVADRIMDASRRMLNEDGYFLAYQMRS-AVHPLLRRHFARVEKGFEWRNIPPCHLYWAHGP 171          
BLAST of mRNA_P-wetherbeei_contig12511.1.1 vs. uniprot
Match: UPI000E57FDF0 (methyltransferase n=1 Tax=Sphingomonas mesophila TaxID=2303576 RepID=UPI000E57FDF0)

HSP 1 Score: 138 bits (347), Expect = 1.240e-37
Identity = 71/184 (38.59%), Postives = 113/184 (61.41%), Query Frame = 1
Query:    4 KLITAFLRDWRTTGSLVPSSRFLQEGMMARIPFGRVQTVIELGPGTGVITQAILNRLSPTGKLLAVDINEDFITRLRNQFNDPRLIPLHASATELPALLAAQGLSHADCVVSGLPFASLPATLRREIIESSVKCLGRRGLFVAFQYAPFALPPLLKEHFRDIRTDFVVLNVPPA-LVYSCRKPA 552
            + +  FL++    GS++PSSR L + M+A + + + +  +E GPG G  T+ IL+RL P  +L+A+D N DFI+ LR    DPRLI +H SA E+  ++A  G +HAD V+SGLPF++LP  +  EI  ++ + +   G F+ +Q++P  +   +   F  I   F  +NVPPA L ++ R+PA
Sbjct:   30 QFLRGFLKNPVMVGSVIPSSRVLIDKMLAPVDWEKTRLFVEYGPGVGTFTRPILDRLGPDARLIAIDTNPDFISYLRKTIPDPRLIAVHGSAAEVERIIAEHGFAHADFVLSGLPFSTLPPGVGEEIGAATSRAIRAGGAFLVYQFSP-KVREFIAPFFERIERGFEWINVPPATLFWAWREPA 212          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12511.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6J4VXX6_9CHLR1.470e-4642.46Methyltransf_25 domain-containing protein n=1 Tax=... [more]
A0A7V8VQD1_9BACT1.750e-4140.80Methyltransferase domain-containing protein n=1 Ta... [more]
A0A556N6H5_9FLAO1.990e-4039.11Methyltransferase domain-containing protein n=1 Ta... [more]
A0A7V4Z076_9BACT2.940e-3941.14Methyltransferase domain-containing protein n=1 Ta... [more]
A0A1L3ZTZ3_9SPHN3.920e-3943.60Methyltransferase n=1 Tax=Tardibacter chloracetimi... [more]
UPI001FECB9C96.030e-3942.94methyltransferase domain-containing protein n=1 Ta... [more]
UPI001FD888246.240e-3939.77methyltransferase domain-containing protein n=1 Ta... [more]
A0A2N5K072_9CHLR2.430e-3842.22Phospholipid methyltransferase n=1 Tax=Chloroflexi... [more]
UPI0003A02F8B5.790e-3841.42methyltransferase domain-containing protein n=1 Ta... [more]
UPI000E57FDF01.240e-3738.59methyltransferase n=1 Tax=Sphingomonas mesophila T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12511contigP-wetherbeei_contig12511:1343..1897 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog755732.Fluta_3454
PFAMsMTS,Methyltransf_12,Methyltransf_25,RrnaAD
Model size555
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.72e-40
EggNOG OGsCOG3963@1|root,COG3963@2|Bacteria,4NPMV@976|Bacteroidetes,1I1YR@117743|Flavobacteriia,2PBV6@246874|Cryomorphaceae
DescriptionRibosomal RNA adenine dimethylase
Cds size555
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185951.3215165-CDS-P-wetherbeei_contig12511:1342..18971683185951.3215165-CDS-P-wetherbeei_contig12511:1342..1897Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12511 1343..1897 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12511.1.1prot_P-wetherbeei_contig12511.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12511 1343..1897 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12511.1.1

>prot_P-wetherbeei_contig12511.1.1 ID=prot_P-wetherbeei_contig12511.1.1|Name=mRNA_P-wetherbeei_contig12511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=185bp
MKLITAFLRDWRTTGSLVPSSRFLQEGMMARIPFGRVQTVIELGPGTGVI
TQAILNRLSPTGKLLAVDINEDFITRLRNQFNDPRLIPLHASATELPALL
AAQGLSHADCVVSGLPFASLPATLRREIIESSVKCLGRRGLFVAFQYAPF
ALPPLLKEHFRDIRTDFVVLNVPPALVYSCRKPA*
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mRNA from alignment at P-wetherbeei_contig12511:1343..1897+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12511.1.1 ID=mRNA_P-wetherbeei_contig12511.1.1|Name=mRNA_P-wetherbeei_contig12511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=555bp|location=Sequence derived from alignment at P-wetherbeei_contig12511:1343..1897+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTTATTACAGCTTTCCTACGCGACTGGAGAACGACGGGTTCGCT GGTTCCGTCATCCCGCTTCCTTCAGGAAGGGATGATGGCCAGAATCCCCT TTGGACGCGTTCAAACCGTCATCGAACTCGGTCCTGGGACCGGTGTTATC ACGCAGGCAATCTTGAATCGGCTCTCTCCGACCGGTAAATTGCTGGCCGT AGATATCAATGAAGATTTCATAACCCGCCTGCGGAATCAGTTCAACGATC CACGTCTGATACCGCTGCACGCATCGGCGACGGAGCTACCGGCACTCCTT GCAGCCCAGGGCTTGAGCCACGCAGACTGCGTCGTTTCGGGGCTGCCTTT CGCGAGTTTGCCGGCCACTTTGCGCCGCGAGATTATCGAATCTAGCGTAA AGTGTCTCGGTCGCAGAGGCCTCTTCGTAGCCTTTCAATATGCGCCGTTC GCCCTGCCGCCTCTACTCAAGGAACACTTTCGCGATATCCGCACCGATTT CGTCGTCCTTAACGTGCCTCCGGCCCTGGTTTACTCCTGCCGAAAACCGG CCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12511:1343..1897+

>mRNA_P-wetherbeei_contig12511.1.1 ID=mRNA_P-wetherbeei_contig12511.1.1|Name=mRNA_P-wetherbeei_contig12511.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=555bp|location=Sequence derived from alignment at P-wetherbeei_contig12511:1343..1897+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTTATTACAGCTTTCCTACGCGACTGGAGAACGACGGGTTCGCT
GGTTCCGTCATCCCGCTTCCTTCAGGAAGGGATGATGGCCAGAATCCCCT
TTGGACGCGTTCAAACCGTCATCGAACTCGGTCCTGGGACCGGTGTTATC
ACGCAGGCAATCTTGAATCGGCTCTCTCCGACCGGTAAATTGCTGGCCGT
AGATATCAATGAAGATTTCATAACCCGCCTGCGGAATCAGTTCAACGATC
CACGTCTGATACCGCTGCACGCATCGGCGACGGAGCTACCGGCACTCCTT
GCAGCCCAGGGCTTGAGCCACGCAGACTGCGTCGTTTCGGGGCTGCCTTT
CGCGAGTTTGCCGGCCACTTTGCGCCGCGAGATTATCGAATCTAGCGTAA
AGTGTCTCGGTCGCAGAGGCCTCTTCGTAGCCTTTCAATATGCGCCGTTC
GCCCTGCCGCCTCTACTCAAGGAACACTTTCGCGATATCCGCACCGATTT
CGTCGTCCTTAACGTGCCTCCGGCCCTGGTTTACTCCTGCCGAAAACCGG
CCTAG
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