prot_P-wetherbeei_contig56184.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig56184.1.1
Unique Nameprot_P-wetherbeei_contig56184.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length99
Homology
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BLAST of mRNA_P-wetherbeei_contig56184.1.1 vs. uniprot
Match: A0A8E3B6X3_RHILI (Uncharacterized protein n=1 Tax=Rhizobium loti TaxID=381 RepID=A0A8E3B6X3_RHILI)

HSP 1 Score: 49.7 bits (117), Expect = 7.890e-5
Identity = 35/101 (34.65%), Postives = 48/101 (47.52%), Query Frame = 0 
Query:    1 GIPCLAANASSLYNPRFQIADFLMWTGVSLDLSVPANRALFHVVVD---LGLGPRNPLVAVAALGTPKYWFQGDEDDFAANKGSAGAVTTVGTISDFTPGP 98
            GI     NA+  Y P+  + DF    G  LDL+ PA  A F V  D   + LG    +    A   P  +F GD   FA NKG+ GA T  G++++ +  P
Sbjct:  166 GIFTAFGNAADGYIPKGDVVDFYFAPGQYLDLTDPAKIAKF-VEADGKPVFLGSDGSIPTGTA---PAIFFSGDASSFATNKGTGGAFTPTGSLTNASTSP 262
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56184.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8E3B6X3_RHILI7.890e-534.65Uncharacterized protein n=1 Tax=Rhizobium loti Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56184contigP-wetherbeei_contig56184:2..298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56184.1.1mRNA_P-wetherbeei_contig56184.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig56184 2..298 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig56184.1.1 ID=prot_P-wetherbeei_contig56184.1.1|Name=mRNA_P-wetherbeei_contig56184.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp
GIPCLAANASSLYNPRFQIADFLMWTGVSLDLSVPANRALFHVVVDLGLG
PRNPLVAVAALGTPKYWFQGDEDDFAANKGSAGAVTTVGTISDFTPGP*
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