mRNA_P-wetherbeei_contig561.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig561.6.1
Unique NamemRNA_P-wetherbeei_contig561.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig561.6.1 vs. uniprot
Match: D7FWP1_ECTSI (HIT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP1_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 1.380e-33
Identity = 76/162 (46.91%), Postives = 99/162 (61.11%), Query Frame = 3
Query:  105 GSSSNSAWDRRQQR-------KGVVLGENGEVSRCLFCEFA-HGREPNGKELLFEDGKVVAFHPLDIAAKQHILVIPRLHKMTVDSLRPTDVPLLDHMLDVGRRLLKERGATGELCFCFHVAPFNSIEHLHLHSMELPARSVKHTVKYSTDAPWCVSLDTVR 566
            G    S W  R+QR       KGVV    GE+  CLFC+FA H +E   KELL+ED  V+AF PL  AAKQHILV+P+ H  TV  L  TD PLLD M +V  +LLK   +  +L F  H+ P+NS++HLHLH++E P  S  + +++S   PWC S + VR
Sbjct:   16 GMGKLSEWLTRKQRPDDDIVSKGVVWNARGEMQSCLFCDFANHTKE---KELLYEDDLVIAFSPLKPAAKQHILVVPKRHISTVGDLVETDTPLLDRMKEVAVKLLKCDASQTQLSF--HIPPWNSVDHLHLHALETPFLSWWNGLRFSEGKPWCASFEGVR 172          
BLAST of mRNA_P-wetherbeei_contig561.6.1 vs. uniprot
Match: A0A835YJP7_9STRA (HIT-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJP7_9STRA)

HSP 1 Score: 115 bits (289), Expect = 7.740e-27
Identity = 64/149 (42.95%), Postives = 86/149 (57.72%), Query Frame = 3
Query:  147 KGVVLGENGEVSRCLFCEFAHGREPNGKELLFEDGKVVAFHPLDIAAKQHILVIPRLHKMTVDSLRPTDVPLLDHMLDVGRRLLKERGATG-------ELCFCFHVAPFNSIEHLHLHSMELP-ARSVKHTVKYSTDAPWCVSLDTVRR 569
            KGV    + ++  CLFC FA  R  + K LLFED   VAF PLDIAA+QHILV+P+ H  TV+ LR  D  L  HM  V    L ++ A         ++   +H  PFNSI+HLHLH+ E+P A++   ++KY+  A WC   + V R
Sbjct:   11 KGVTYDADNKIISCLFCNFA--RRTDAKPLLFEDDHCVAFLPLDIAAEQHILVVPKTHIKTVNDLRTEDASLAAHMRQVATATLTQQAAAQARTLDPRDIRLTYHAPPFNSIDHLHLHAFEMPFAKNPLLSIKYAPWALWCKQHEDVER 157          
BLAST of mRNA_P-wetherbeei_contig561.6.1 vs. uniprot
Match: U9TE69_RHIID (HIT domain-containing protein n=4 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9TE69_RHIID)

HSP 1 Score: 110 bits (275), Expect = 3.120e-25
Identity = 54/120 (45.00%), Postives = 75/120 (62.50%), Query Frame = 3
Query:  186 CLFCEFAHGREPNGKELLFEDGKVVAFHPLDIAAKQHILVIPRLHKMTVDSLRPTDVPLLDHMLDVGRRLLKERG-ATGELCFCFHVAPFNSIEHLHLHSMELPARSVKHTVKYSTDAPW 542
            C+FC+         K++++ED ++VAFH +  AAK H+L+IPR H   VDSL P D PLL HM+D G +LL E G    E    FHV P+NS+ HLHLH + LP R++ ++ KY+    W
Sbjct:   16 CVFCDLTD------KKIVYEDERIVAFHDISPAAKLHLLIIPRNHIDNVDSLTPNDAPLLKHMIDTGNQLLSESGYQLSERRVGFHVPPYNSVHHLHLHCIGLPYRNIFYSTKYTELVHW 129          
BLAST of mRNA_P-wetherbeei_contig561.6.1 vs. uniprot
Match: W7TVM8_9STRA (Histidine triad nucleotide binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVM8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.140e-24
Identity = 59/144 (40.97%), Postives = 83/144 (57.64%), Query Frame = 3
Query:  147 KGVVL-GENGEVSRCLFCEFAHGREPNGKE-LLFEDGKVVAFHPLDIAAKQHILVIPRLHKMTVDSLRPTDVPLLDHMLDVGRRLLKERGATGELC---FCFHVAPFNSIEHLHLHSMELPARSVKHTVKYSTDAPWCVSLDTV 563
            KGV    +N  + RCLFC+ A  ++ + K  + +ED +VV F PL+  A +H LV+PR H     +L+PTD+P+L +M DVG ++LK++     L    FCFH+ PFNSI H+HLH    P  +     KY     WC S D V
Sbjct:   17 KGVTYEADNVTIKRCLFCDIAADKQGSRKTPIAYEDEQVVVFAPLEKCALEHWLVVPRAHIRNATTLQPTDLPILKYMRDVGYQVLKDKQPDVNLSKMQFCFHIEPFNSIAHIHLHCQVPPFITPISAFKYKEGTSWCWSHDAV 160          
BLAST of mRNA_P-wetherbeei_contig561.6.1 vs. uniprot
Match: A0A7S2R6S0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6S0_9STRA)

HSP 1 Score: 103 bits (258), Expect = 4.090e-22
Identity = 65/154 (42.21%), Postives = 88/154 (57.14%), Query Frame = 3
Query:  144 RKGVVLGENGEVSRCLFCEFAHGR-EPNGKE--LLFEDGKVVAFHPLDIAAKQHILVIPRLHKMTVDSLRPTDVPLLDHMLDVGRRLLKERG--ATGELC------FCFHVAPFNSIEHLHLHSMELPARSVKHTVKYST-DAPWCVSLDTVRR 569
            +KGV    +G +   LF E + GR  P G++  LL  D  V AF P+  A++ H++V+PR    +   L   D+PLL+HM  VG ++L  R   +T E C      FCFHV PFNSI+HLHLH +E P +S    +KYS  D PWC    TVR+
Sbjct:   16 QKGVRYAPDGSMVWSLFQEISEGRIAPGGRDPTLLHSDELVAAFEPIGPASQNHVVVVPRQWVKSCLELTHEDLPLLEHMRTVGEKVLASRSPSSTQEGCSTPFRQFCFHVPPFNSIDHLHLHCIESP-KSPLGMLKYSPFDTPWCRMYGTVRQ 168          
BLAST of mRNA_P-wetherbeei_contig561.6.1 vs. uniprot
Match: A0A8H7UQJ0_9FUNG (HIT domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UQJ0_9FUNG)

HSP 1 Score: 100 bits (250), Expect = 1.300e-21
Identity = 50/126 (39.68%), Postives = 73/126 (57.94%), Query Frame = 3
Query:  186 CLFCEFAHGREPNGKELLFEDGKVVAFHPLDIAAKQHILVIPRLHKMTVDSLRPTDVPLLDHMLDVGRRLLKERGATGELCFCFHVAPFNSIEHLHLHSMELPARSVKHTVKYSTDAPWCVSLDTV 563
            C+FC+       NG  +++ED +V+AFH    A+K H+L+IPR H  TV  L+P    LL  M+DVG+ L  E     ++   FHV PFNS+ HLHLH + LP +++   +KY    PW   ++ V
Sbjct:   29 CVFCDVTRN---NGFNIVYEDNEVIAFHDRSPASKLHLLIIPRQHVGTVKDLKPEHQSLLSKMVDVGKHLSMEHN---QVRMGFHVPPFNSVNHLHLHVLSLPFKNLWRKLKYQPTMPWFAPVNDV 148          
BLAST of mRNA_P-wetherbeei_contig561.6.1 vs. uniprot
Match: A0A1Y1ZAA6_9FUNG (HIT-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZAA6_9FUNG)

HSP 1 Score: 98.6 bits (244), Expect = 1.160e-20
Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = 3
Query:  180 SRCLFCEFAHGREPNGKELLFEDGKVVAFHPLDIAAKQHILVIPRLHKMTVDSLRPTDVPLLDHMLDVGRRLLKERGATGELC-FCFHVAPFNSIEHLHLHSMELPARSVKHTVKYSTDAP-WCVSLDTV 563
            S C+FC  +   E +G  ++++D  V+AFH +  AAK H+LV+P  H  TV +L+  D   +  M  VGRRLL+E+G T E     FH+ PFNSI HLHLH + LP R+     KYS + P W +S++ V
Sbjct:   30 SECVFCTIS---EHSGTRMVYQDEDVIAFHDIRPAAKTHLLVVPTKHIETVKALQGHDYTTVKKMEAVGRRLLREQGYTEENTRLGFHIPPFNSINHLHLHCLGLPFRNWWIGGKYSHNTPLWFISVEKV 156          
BLAST of mRNA_P-wetherbeei_contig561.6.1 vs. uniprot
Match: A0A507E0J3_9FUNG (HIT domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E0J3_9FUNG)

HSP 1 Score: 100 bits (250), Expect = 2.460e-20
Identity = 56/138 (40.58%), Postives = 80/138 (57.97%), Query Frame = 3
Query:  138 QQRKGVVLGENGEVSRCLFCEFAHGREPNGKELLFEDGKVVAFHPLDIAAKQHILVIPRLHKMTVDSLRPTDVPLLDHMLDVGRRLLKERGATGELC--FCFHVAPFNSIEHLHLHSMELPARSVKHTVKYST-DAPW 542
            QQ  GV   E+G    C+FC    GRE   + ++++D + +AFH ++ +A+ H+L+IPR H  T+ SL PT +PLL  ML+  R +L   G T +      FHV PF S+ HLHLH + LP R    +VKY   D+ W
Sbjct:  120 QQTHGVARHEDG----CVFCRIVDGRESTAR-IVYQDDEFIAFHDINPSAQLHLLLIPRSHIPTIHSLTPTHLPLLTRMLERARTILHSHGFTEQQQQQLGFHVPPFTSVSHLHLHVLGLPYRGWLRSVKYPRRDSTW 252          
BLAST of mRNA_P-wetherbeei_contig561.6.1 vs. uniprot
Match: A0A8H7VH56_9FUNG (HIT domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VH56_9FUNG)

HSP 1 Score: 96.7 bits (239), Expect = 3.640e-20
Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 3
Query:  186 CLF---CEFAHGREPNGKELLFEDGKVVAFHPLDIAAKQHILVIPRLHKMTVDSLRPTDVPLLDHMLDVGRRLLKERGATGE----LCFCFHVAPFNSIEHLHLHSMELPARSVKHTVKYSTDAPWCV 548
            C F   C F +    NG  ++ ED  ++AFH     A  H+L+IPR H  TV +L  + VPLL+ M+++GRRLL ++G   +      F FHV PFNSI HLH+H   LP ++    +KY+   PW +
Sbjct:    4 CCFPRSCPFCNVSVDNGFRIVHEDEHLIAFHDRSAGAAVHLLIIPREHITTVKALDNSHVPLLEKMMNLGRRLLSDQGYNPDDDTQSRFGFHVPPFNSINHLHMHVQVLPYKNTFRKLKYTRGYPWYI 131          
BLAST of mRNA_P-wetherbeei_contig561.6.1 vs. uniprot
Match: A0A2Z6R1Z1_9GLOM (Bifunctional adenosine 5'-phosphosulfate phosphorylase/adenylylsulfatase HINT4 n=2 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6R1Z1_9GLOM)

HSP 1 Score: 96.3 bits (238), Expect = 5.420e-20
Identity = 50/120 (41.67%), Postives = 74/120 (61.67%), Query Frame = 3
Query:  186 CLFCEFAHGREPNGKELLFEDGKVVAFHPLDIAAKQHILVIPRLHKMTVDSLRPTDVPLLDHMLDVGRRLLKERG-ATGELCFCFHVAPFNSIEHLHLHSMELPARSVKHTVKYSTDAPW 542
            C+FC+         ++++++D ++VAFH ++ AAK H+L+IPR H  +V+SL   D+ LL HM+D G RLL E G    +    FH+ P+NS+ HLHLH + LP R+    VKY    PW
Sbjct:   18 CVFCDLTD------EKIVYKDERIVAFHDINPAAKIHLLIIPRNHIDSVNSLTLNDISLLKHMIDTGDRLLYEFGFQLPQRSIGFHIPPYNSVYHLHLHCLGLPYRNRFIGVKYMELMPW 131          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig561.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWP1_ECTSI1.380e-3346.91HIT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YJP7_9STRA7.740e-2742.95HIT-like domain-containing protein n=1 Tax=Tribone... [more]
U9TE69_RHIID3.120e-2545.00HIT domain-containing protein n=4 Tax=Rhizophagus ... [more]
W7TVM8_9STRA1.140e-2440.97Histidine triad nucleotide binding protein n=1 Tax... [more]
A0A7S2R6S0_9STRA4.090e-2242.21Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8H7UQJ0_9FUNG1.300e-2139.68HIT domain-containing protein n=1 Tax=Umbelopsis v... [more]
A0A1Y1ZAA6_9FUNG1.160e-2043.08HIT-like protein n=1 Tax=Basidiobolus meristosporu... [more]
A0A507E0J3_9FUNG2.460e-2040.58HIT domain-containing protein n=1 Tax=Powellomyces... [more]
A0A8H7VH56_9FUNG3.640e-2039.84HIT domain-containing protein n=1 Tax=Mucor circin... [more]
A0A2Z6R1Z1_9GLOM5.420e-2041.67Bifunctional adenosine 5'-phosphosulfate phosphory... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig561contigP-wetherbeei_contig561:3286..4653 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FWP1
PFAMsDcpS_C
Model size1368
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.99e-36
EggNOG OGsCOG0537@1|root,KOG4359@2759|Eukaryota
Ec32 ortholog descriptionHistidine triad (HIT) protein
Ec32 orthologEc-06_001390.1
Descriptionnucleoside phosphate binding
Cds size642
COG categoryFG
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186834.8862114-UTR-P-wetherbeei_contig561:3285..39191683186834.8862114-UTR-P-wetherbeei_contig561:3285..3919Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig561 3286..3919 -
1683186834.903251-UTR-P-wetherbeei_contig561:4561..46531683186834.903251-UTR-P-wetherbeei_contig561:4561..4653Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig561 4562..4653 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186834.8953607-CDS-P-wetherbeei_contig561:3919..45611683186834.8953607-CDS-P-wetherbeei_contig561:3919..4561Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig561 3920..4561 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig561.6.1prot_P-wetherbeei_contig561.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig561 3920..4561 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig561.6.1

>prot_P-wetherbeei_contig561.6.1 ID=prot_P-wetherbeei_contig561.6.1|Name=mRNA_P-wetherbeei_contig561.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=214bp
MGNHGSSSNSAWDRRQQRKGVVLGENGEVSRCLFCEFAHGREPNGKELLF
EDGKVVAFHPLDIAAKQHILVIPRLHKMTVDSLRPTDVPLLDHMLDVGRR
LLKERGATGELCFCFHVAPFNSIEHLHLHSMELPARSVKHTVKYSTDAPW
CVSLDTVRRRLLLRRKKEGGGKRNDDDGAAAVAIVAGGPIAPEAAGGDNK
SRGLEGDGTTQLV*
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mRNA from alignment at P-wetherbeei_contig561:3286..4653-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig561.6.1 ID=mRNA_P-wetherbeei_contig561.6.1|Name=mRNA_P-wetherbeei_contig561.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1368bp|location=Sequence derived from alignment at P-wetherbeei_contig561:3286..4653- (Phaeothamnion wetherbeei SAG_119_79)
TGTACAACAGGAAACCTTAGAAACATAGAGAGATCCCACGTGGCGCCCTT TATCAGCTTTCTCTGCCTGGCTGGAGGGTGTTTTCATACCGAATGGGCAA CCACGGCTCGAGCAGCAACTCGGCCTGGGACCGAAGGCAACAACGAAAGG GCGTCGTCCTTGGTGAAAACGGCGAGGTTTCCAGATGCCTCTTTTGTGAG TTCGCCCACGGTCGTGAACCGAACGGTAAAGAGCTCTTGTTCGAGGACGG GAAGGTGGTGGCGTTCCATCCTCTTGACATCGCGGCGAAGCAGCACATCT TGGTGATCCCGCGGCTTCACAAAATGACTGTGGACTCGCTCCGGCCCACC GACGTCCCGCTCTTAGATCACATGCTCGACGTCGGCCGGCGCCTGCTGAA GGAACGCGGCGCGACGGGCGAGCTCTGTTTCTGCTTCCACGTCGCTCCTT TTAATAGCATCGAACACTTGCACCTCCATTCGATGGAGCTGCCGGCACGG AGTGTGAAGCACACGGTCAAATACAGCACCGACGCGCCGTGGTGCGTTTC TTTGGACACTGTTCGAAGGCGGCTGCTGCTCCGGAGAAAGAAAGAGGGGG GAGGGAAGCGAAACGATGACGACGGCGCCGCCGCCGTTGCCATTGTGGCA GGTGGACCCATCGCTCCGGAAGCGGCTGGCGGCGACAACAAGTCTCGCGG TTTGGAGGGCGACGGGACTACACAACTAGTTTAAATCTGTTTCACTTCCT CGTGGCAATCGTTCTCTGTTGGATAAAGCTGCGACACGGCAAGGCAAGGG CGCGCGCTCCCTACTCCGTTCGCGAACGCATAACACCCGTGGTACCAGCT TGAATCAGGAGTTTTTGCTCAGTGTGAAGGTGAGATATATATCTTTTACC CACTTTGCAGAAGGAAAGCGAGATGCCGCCCTTGCCTGCTCCGGAATCCT AGTGCTTAAGATCCTCTTCATATGCTGTCTTTCTAGCGGTGGCGCCGATC AATTTTCAAGTTCGTCGCCAGCGCTCCATCAATGTTTTGTGGCGCTCGAC CTTTTCAGTCTTTAAATGCCTGAAGACAGCTGCTGGTGCCGTTCGCATTG CTGCACCTTAAAGTCCGGGTAATATCATTCTGCGCATCCCTGCGGTAATA TGCTTTCTTGAGTACAAGCTTCTCCTTACAAGGTTCACACTTCCCGTTTC GTTTTTTGCCATTCCTTTCTGCACTTCTTTGGGCAAATGTGTCCAACCAC CTCACTTCGATGGACGGTTACGAGGGACGAAAGTCAGAAAATCTGTCCCT GAGAGACACTTTTATGGTCTAAAAGGAAAAGGAGCGAAATAGTTCCCAGA CAAAGAAGAAGCACGGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig561:3286..4653-

>mRNA_P-wetherbeei_contig561.6.1 ID=mRNA_P-wetherbeei_contig561.6.1|Name=mRNA_P-wetherbeei_contig561.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=642bp|location=Sequence derived from alignment at P-wetherbeei_contig561:3286..4653- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCAACCACGGCTCGAGCAGCAACTCGGCCTGGGACCGAAGGCAACA
ACGAAAGGGCGTCGTCCTTGGTGAAAACGGCGAGGTTTCCAGATGCCTCT
TTTGTGAGTTCGCCCACGGTCGTGAACCGAACGGTAAAGAGCTCTTGTTC
GAGGACGGGAAGGTGGTGGCGTTCCATCCTCTTGACATCGCGGCGAAGCA
GCACATCTTGGTGATCCCGCGGCTTCACAAAATGACTGTGGACTCGCTCC
GGCCCACCGACGTCCCGCTCTTAGATCACATGCTCGACGTCGGCCGGCGC
CTGCTGAAGGAACGCGGCGCGACGGGCGAGCTCTGTTTCTGCTTCCACGT
CGCTCCTTTTAATAGCATCGAACACTTGCACCTCCATTCGATGGAGCTGC
CGGCACGGAGTGTGAAGCACACGGTCAAATACAGCACCGACGCGCCGTGG
TGCGTTTCTTTGGACACTGTTCGAAGGCGGCTGCTGCTCCGGAGAAAGAA
AGAGGGGGGAGGGAAGCGAAACGATGACGACGGCGCCGCCGCCGTTGCCA
TTGTGGCAGGTGGACCCATCGCTCCGGAAGCGGCTGGCGGCGACAACAAG
TCTCGCGGTTTGGAGGGCGACGGGACTACACAACTAGTTTAA
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