mRNA_P-wetherbeei_contig56097.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56097.1.1
Unique NamemRNA_P-wetherbeei_contig56097.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig56097.1.1 vs. uniprot
Match: A0A3N1M9Y1_9PROT (Pimeloyl-ACP methyl ester carboxylesterase n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1M9Y1_9PROT)

HSP 1 Score: 202 bits (515), Expect = 3.750e-63
Identity = 93/122 (76.23%), Postives = 107/122 (87.70%), Query Frame = 1
Query:    1 MTDFEHHHARLSGVALHYVTAGQGDPVVLVHGWPSTWYEWRHVIPLLAAGHRVIAPDLRGLGDSSRPAEGYDKKTLAADLWELLSGTLGLKQWHLVGHDWGGPVAFALAGAHPEAIRTLTLL 366
            M + EHH ARLS VA+HYVTAG+G PVVL+HGWPSTWYEWRHVI  LA  HRVIAPDLRGLGDSSRPA+GYDK+T+AAD+WEL+   LGL ++HLVGHDWGGP AFALA AHPEAIRTL+++
Sbjct:    1 MAEVEHHFARLSQVAMHYVTAGEGPPVVLLHGWPSTWYEWRHVIDRLAPHHRVIAPDLRGLGDSSRPADGYDKRTVAADVWELVEH-LGLGRFHLVGHDWGGPTAFALAAAHPEAIRTLSIV 121          
BLAST of mRNA_P-wetherbeei_contig56097.1.1 vs. uniprot
Match: A0A257PM51_9PROT (Alpha/beta hydrolase n=1 Tax=Rhodospirillales bacterium 20-64-7 TaxID=1970566 RepID=A0A257PM51_9PROT)

HSP 1 Score: 186 bits (472), Expect = 1.010e-56
Identity = 80/117 (68.38%), Postives = 96/117 (82.05%), Query Frame = 1
Query:   16 HHHARLSGVALHYVTAGQGDPVVLVHGWPSTWYEWRHVIPLLAAGHRVIAPDLRGLGDSSRPAEGYDKKTLAADLWELLSGTLGLKQWHLVGHDWGGPVAFALAGAHPEAIRTLTLL 366
            HHHA L  V LHYVTAGQG PVVL+HGWP +WYEWRH+IP LA  +RVIAPDLRGLGDSSRPA GYDKKT+  D+W L+   LG+ +++LVGHDWGGP A+A+A AHP+A+R L +L
Sbjct:    8 HHHADLGDVRLHYVTAGQGFPVVLLHGWPQSWYEWRHLIPDLAKSYRVIAPDLRGLGDSSRPANGYDKKTIGNDVWRLVHDALGISEFYLVGHDWGGPTAYAVAAAHPDAVRKLAIL 124          
BLAST of mRNA_P-wetherbeei_contig56097.1.1 vs. uniprot
Match: UPI00131EBB87 (alpha/beta fold hydrolase n=1 Tax=Acidisphaera sp. S103 TaxID=1747223 RepID=UPI00131EBB87)

HSP 1 Score: 185 bits (470), Expect = 1.850e-56
Identity = 81/118 (68.64%), Postives = 95/118 (80.51%), Query Frame = 1
Query:   13 EHHHARLSGVALHYVTAGQGDPVVLVHGWPSTWYEWRHVIPLLAAGHRVIAPDLRGLGDSSRPAEGYDKKTLAADLWELLSGTLGLKQWHLVGHDWGGPVAFALAGAHPEAIRTLTLL 366
            EH HA L  V LHYVTAG G PVVL+HGWP +WYEWRH+IP LA   RVIAPDLRGLGDSSRPAEGYDKKT+  D+W L+   LG+ ++HLVGHDWGGP A+A+A AHP+A+R L +L
Sbjct:    3 EHGHADLGDVRLHYVTAGSGFPVVLLHGWPQSWYEWRHIIPGLAERFRVIAPDLRGLGDSSRPAEGYDKKTVGGDVWRLVHDVLGVSEFHLVGHDWGGPTAYAVAAAHPDAVRRLAIL 120          
BLAST of mRNA_P-wetherbeei_contig56097.1.1 vs. uniprot
Match: A0A2D7FF16_9HYPH (Alpha/beta hydrolase n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FF16_9HYPH)

HSP 1 Score: 184 bits (468), Expect = 5.700e-56
Identity = 81/117 (69.23%), Postives = 94/117 (80.34%), Query Frame = 1
Query:   16 HHHARLSGVALHYVTAGQGDPVVLVHGWPSTWYEWRHVIPLLAAGHRVIAPDLRGLGDSSRPAEGYDKKTLAADLWELLSGTLGLKQWHLVGHDWGGPVAFALAGAHPEAIRTLTLL 366
            HH A +  V LHYVTAG G P+VL+HGWP TWYEWRH+IP LA    VIAPDLRGLGDSSRP  GYDKKT++ D+W L+S  LG + +HLVGHDWGGP AFALA AHPE+IRTLT++
Sbjct:   10 HHFAEVGEVMLHYVTAGSGPPIVLLHGWPQTWYEWRHIIPRLAERFTVIAPDLRGLGDSSRPLSGYDKKTVSGDVWRLVSEQLGHETFHLVGHDWGGPTAFALAAAHPESIRTLTIV 126          
BLAST of mRNA_P-wetherbeei_contig56097.1.1 vs. uniprot
Match: A0A354V3M6_9PROT (Alpha/beta hydrolase n=1 Tax=Acetobacteraceae bacterium TaxID=1909293 RepID=A0A354V3M6_9PROT)

HSP 1 Score: 182 bits (463), Expect = 2.060e-55
Identity = 80/118 (67.80%), Postives = 94/118 (79.66%), Query Frame = 1
Query:   13 EHHHARLSGVALHYVTAGQGDPVVLVHGWPSTWYEWRHVIPLLAAGHRVIAPDLRGLGDSSRPAEGYDKKTLAADLWELLSGTLGLKQWHLVGHDWGGPVAFALAGAHPEAIRTLTLL 366
            EHH+A L  V LHYVTAG G PVVL+HGWP +WYEWRH+IP LA   RVIAPDLRGLGDSSRPA GYDK T+  D+W L+   LGL +++LVGHDWGGP A+A+A AHPEA+R L +L
Sbjct:    2 EHHYADLGDVRLHYVTAGSGFPVVLLHGWPQSWYEWRHIIPGLAERFRVIAPDLRGLGDSSRPAGGYDKNTVGGDIWRLVHDVLGLSEFYLVGHDWGGPTAYAVAAAHPEAVRKLAIL 119          
BLAST of mRNA_P-wetherbeei_contig56097.1.1 vs. uniprot
Match: A0A2S6N428_RHOGL (Alpha/beta hydrolase n=2 Tax=Rhodopila globiformis TaxID=1071 RepID=A0A2S6N428_RHOGL)

HSP 1 Score: 182 bits (461), Expect = 5.650e-55
Identity = 79/118 (66.95%), Postives = 93/118 (78.81%), Query Frame = 1
Query:   13 EHHHARLSGVALHYVTAGQGDPVVLVHGWPSTWYEWRHVIPLLAAGHRVIAPDLRGLGDSSRPAEGYDKKTLAADLWELLSGTLGLKQWHLVGHDWGGPVAFALAGAHPEAIRTLTLL 366
            EHHHA L  V LHYVT G G PVVL+HGWP +WYEWR +IP LA  ++VIAPDLRGLGDSSRP EGYDKKT+  D+W L+   LG+  +HLVGHDWGGP A+A+A AHPEA+R L +L
Sbjct:   12 EHHHADLGDVRLHYVTTGSGFPVVLLHGWPQSWYEWRKIIPGLAEHYQVIAPDLRGLGDSSRPPEGYDKKTVGNDVWRLVHDVLGISAFHLVGHDWGGPTAYAIAAAHPEAVRKLVIL 129          
BLAST of mRNA_P-wetherbeei_contig56097.1.1 vs. uniprot
Match: A0A3N5NV55_9HYPH (Alpha/beta hydrolase (Fragment) n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A3N5NV55_9HYPH)

HSP 1 Score: 175 bits (443), Expect = 1.030e-53
Identity = 79/120 (65.83%), Postives = 92/120 (76.67%), Query Frame = 1
Query:    7 DFEHHHARLSGVALHYVTAGQGDPVVLVHGWPSTWYEWRHVIPLLAAGHRVIAPDLRGLGDSSRPAEGYDKKTLAADLWELLSGTLGLKQWHLVGHDWGGPVAFALAGAHPEAIRTLTLL 366
            D  HH A L  V LHYVTAG+G  VVL+HGWP TW+EWRHVIP LA  + VIAPD+RGLGDSSRP  GYDKKT+A D+W L++  LG   + LVGHDWGGP AFALA AHP+A+R L +L
Sbjct:    6 DVSHHFADLGDVLLHYVTAGKGPAVVLLHGWPQTWWEWRHVIPALAEKYTVIAPDMRGLGDSSRPLGGYDKKTVANDIWLLVAERLGHSSFFLVGHDWGGPTAFALAAAHPQAVRRLVIL 125          
BLAST of mRNA_P-wetherbeei_contig56097.1.1 vs. uniprot
Match: A0A2E5PJQ7_9PROT (Alpha/beta hydrolase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PJQ7_9PROT)

HSP 1 Score: 177 bits (450), Expect = 2.310e-53
Identity = 76/122 (62.30%), Postives = 95/122 (77.87%), Query Frame = 1
Query:    1 MTDFEHHHARLSGVALHYVTAGQGDPVVLVHGWPSTWYEWRHVIPLLAAGHRVIAPDLRGLGDSSRPAEGYDKKTLAADLWELLSGTLGLKQWHLVGHDWGGPVAFALAGAHPEAIRTLTLL 366
            M +  HH+A L  V +HY+TAG+G PV+L+HGWP TWYEWRH+IP LA  + VIAPDLRGLGDSSRPA+GYDK+T+A D+W +    LG +++ LVGHDWGGP AFALA  HPEA+  L +L
Sbjct:    1 MNEVAHHYADLGDVKIHYITAGRGPPVILLHGWPETWYEWRHIIPKLAPYYTVIAPDLRGLGDSSRPADGYDKQTVANDIWRVAHDELGHERFLLVGHDWGGPTAFALAATHPEAVEKLAIL 122          
BLAST of mRNA_P-wetherbeei_contig56097.1.1 vs. uniprot
Match: B0U7K5_METS4 (Alpha/beta hydrolase fold n=2 Tax=unclassified Methylobacterium TaxID=2615210 RepID=B0U7K5_METS4)

HSP 1 Score: 176 bits (446), Expect = 1.100e-52
Identity = 83/122 (68.03%), Postives = 96/122 (78.69%), Query Frame = 1
Query:    1 MTDFEHHHARLSGVALHYVTAGQGDPVVLVHGWPSTWYEWRHVIPLLAAGHRVIAPDLRGLGDSSRPAEGYDKKTLAADLWELLSGTLGLKQWHLVGHDWGGPVAFALAGAHPEAIRTLTLL 366
            MT      A L GV+LHY+ AG GD VVLVHG P T +EWRHVIP LA  +RVIAPDLRGLGDSSRPA GYDKKTLA DLW+L+ G LG++++ LVGHDWGGPVAF+LA  HPEA+R L +L
Sbjct:    7 MTAIARRFADLDGVSLHYLDAGAGDAVVLVHGIPQTSHEWRHVIPRLAGRYRVIAPDLRGLGDSSRPATGYDKKTLAGDLWQLVRGHLGIERFFLVGHDWGGPVAFSLAAQHPEAVRRLAIL 128          
BLAST of mRNA_P-wetherbeei_contig56097.1.1 vs. uniprot
Match: A0A523P1N5_9PROT (Alpha/beta hydrolase n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P1N5_9PROT)

HSP 1 Score: 175 bits (444), Expect = 1.220e-52
Identity = 73/107 (68.22%), Postives = 93/107 (86.92%), Query Frame = 1
Query:   46 LHYVTAGQGDPVVLVHGWPSTWYEWRHVIPLLAAGHRVIAPDLRGLGDSSRPAEGYDKKTLAADLWELLSGTLGLKQWHLVGHDWGGPVAFALAGAHPEAIRTLTLL 366
            +HYVTAG G+PVVL+HGWP TWYEWR VI LL AGH +IAPDLRGLGDSSRP++GYD +TLAAD+WEL++G L ++++ LVGHDWGGP+++ALA AHP A+R L ++
Sbjct:    3 MHYVTAGSGEPVVLLHGWPQTWYEWRAVIALLCAGHFLIAPDLRGLGDSSRPSDGYDTRTLAADIWELVNGELNIERFCLVGHDWGGPISYALAAAHPNAVRRLAII 109          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56097.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3N1M9Y1_9PROT3.750e-6376.23Pimeloyl-ACP methyl ester carboxylesterase n=1 Tax... [more]
A0A257PM51_9PROT1.010e-5668.38Alpha/beta hydrolase n=1 Tax=Rhodospirillales bact... [more]
UPI00131EBB871.850e-5668.64alpha/beta fold hydrolase n=1 Tax=Acidisphaera sp.... [more]
A0A2D7FF16_9HYPH5.700e-5669.23Alpha/beta hydrolase n=2 Tax=Hyphomicrobiaceae Tax... [more]
A0A354V3M6_9PROT2.060e-5567.80Alpha/beta hydrolase n=1 Tax=Acetobacteraceae bact... [more]
A0A2S6N428_RHOGL5.650e-5566.95Alpha/beta hydrolase n=2 Tax=Rhodopila globiformis... [more]
A0A3N5NV55_9HYPH1.030e-5365.83Alpha/beta hydrolase (Fragment) n=1 Tax=Hyphomicro... [more]
A0A2E5PJQ7_9PROT2.310e-5362.30Alpha/beta hydrolase n=1 Tax=Rhodospirillaceae bac... [more]
B0U7K5_METS41.100e-5268.03Alpha/beta hydrolase fold n=2 Tax=unclassified Met... [more]
A0A523P1N5_9PROT1.220e-5268.22Alpha/beta hydrolase n=2 Tax=Proteobacteria bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56097contigP-wetherbeei_contig56097:154..519 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog426117.M446_1736
PFAMsAbhydrolase_1
Model size366
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944
Exons1
Evalue1.8e-53
EggNOG OGsCOG0596@1|root,COG0596@2|Bacteria,1MUVB@1224|Proteobacteria,2TREP@28211|Alphaproteobacteria,1JVCQ@119045|Methylobacteriaceae
DescriptionPFAM alpha beta hydrolase fold
Cds size366
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186834.7470298-CDS-P-wetherbeei_contig56097:153..5191683186834.7470298-CDS-P-wetherbeei_contig56097:153..519Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56097 154..519 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56097.1.1prot_P-wetherbeei_contig56097.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56097 154..519 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56097.1.1

>prot_P-wetherbeei_contig56097.1.1 ID=prot_P-wetherbeei_contig56097.1.1|Name=mRNA_P-wetherbeei_contig56097.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=122bp
MTDFEHHHARLSGVALHYVTAGQGDPVVLVHGWPSTWYEWRHVIPLLAAG
HRVIAPDLRGLGDSSRPAEGYDKKTLAADLWELLSGTLGLKQWHLVGHDW
GGPVAFALAGAHPEAIRTLTLL
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mRNA from alignment at P-wetherbeei_contig56097:154..519+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56097.1.1 ID=mRNA_P-wetherbeei_contig56097.1.1|Name=mRNA_P-wetherbeei_contig56097.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig56097:154..519+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGACTTCGAACATCACCATGCCCGCCTTTCCGGTGTGGCCCTGCA CTACGTGACCGCCGGCCAAGGCGACCCGGTCGTGCTGGTGCACGGCTGGC CCTCCACCTGGTACGAATGGCGCCATGTGATTCCGCTCCTTGCCGCTGGC CACCGCGTCATCGCGCCGGACCTGCGCGGCCTGGGCGACAGCTCGCGCCC GGCGGAGGGCTACGACAAGAAAACGCTTGCCGCCGACCTTTGGGAACTGC TGTCGGGCACGCTTGGTTTGAAGCAATGGCATCTGGTGGGCCATGACTGG GGCGGGCCGGTGGCCTTCGCGCTGGCGGGCGCCCACCCCGAGGCGATCCG CACGCTGACCCTGCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56097:154..519+

>mRNA_P-wetherbeei_contig56097.1.1 ID=mRNA_P-wetherbeei_contig56097.1.1|Name=mRNA_P-wetherbeei_contig56097.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig56097:154..519+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGACTTCGAACATCACCATGCCCGCCTTTCCGGTGTGGCCCTGCA
CTACGTGACCGCCGGCCAAGGCGACCCGGTCGTGCTGGTGCACGGCTGGC
CCTCCACCTGGTACGAATGGCGCCATGTGATTCCGCTCCTTGCCGCTGGC
CACCGCGTCATCGCGCCGGACCTGCGCGGCCTGGGCGACAGCTCGCGCCC
GGCGGAGGGCTACGACAAGAAAACGCTTGCCGCCGACCTTTGGGAACTGC
TGTCGGGCACGCTTGGTTTGAAGCAATGGCATCTGGTGGGCCATGACTGG
GGCGGGCCGGTGGCCTTCGCGCTGGCGGGCGCCCACCCCGAGGCGATCCG
CACGCTGACCCTGCTG
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