mRNA_P-wetherbeei_contig12507.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A1F4FDQ8_9PROT (Electron transporter RnfB n=6 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4FDQ8_9PROT) HSP 1 Score: 410 bits (1055), Expect = 3.880e-141 Identity = 215/249 (86.35%), Postives = 236/249 (94.78%), Query Frame = 1 Query: 1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747 MKVLV VKRVVDYNVKVRVK+DGTGVETANVKMSMNPFDEIA+EEA+RL+EAGVATE++AVSCG ACQETLRTALAIGADRAILV +D ELQPLAVAKLLKAVCAKE+PQLVILGKQAIDDD+NQTGQMLAAL+GW+QATFASK A+G+AQVTREVDGGL+TIS+KLPA++TTDLRLNEPRYVTLPNIMKAKKK LE ++PDALGVDVAPRLKTLKV EPPKR+AG+KVPDA TLV KLRNEAKVI Sbjct: 1 MKVLVPVKRVVDYNVKVRVKADGTGVETANVKMSMNPFDEIALEEAIRLREAGVATEVVAVSCGVPACQETLRTALAIGADRAILVASDAELQPLAVAKLLKAVCAKENPQLVILGKQAIDDDANQTGQMLAALLGWAQATFASKVQVAEGRAQVTREVDGGLDTISVKLPAVITTDLRLNEPRYVTLPNIMKAKKKPLETLQPDALGVDVAPRLKTLKVTEPPKRQAGVKVPDARTLVEKLRNEAKVI 249
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A1F4FBI4_9PROT (Electron transporter RnfB n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4FBI4_9PROT) HSP 1 Score: 407 bits (1046), Expect = 9.050e-140 Identity = 213/249 (85.54%), Postives = 234/249 (93.98%), Query Frame = 1 Query: 1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747 MKVLVSVKRVVD+NVKVRVK+DGTGVETANVKMSMNPFDEIA+EEAVRLKEAGVATEI+AVSCGP ACQETLRTALAIGADRA+LVE+D ELQPLAVAKL+KAVC KESPQLVI+GKQAIDDDSNQTGQMLAAL+GW QATFASK A+G+A+VTREVDGGLET+S++LPA+VTTDLRLNEPRYVTLPNIMKAKKK+LE +KP+ LGVDVAPRL TLKV EP KRKAG+K+PDA LV KLRNEAKVI Sbjct: 1 MKVLVSVKRVVDFNVKVRVKADGTGVETANVKMSMNPFDEIAIEEAVRLKEAGVATEILAVSCGPSACQETLRTALAIGADRAVLVESDAELQPLAVAKLMKAVCLKESPQLVIMGKQAIDDDSNQTGQMLAALLGWPQATFASKLKVANGRAEVTREVDGGLETVSVRLPAVVTTDLRLNEPRYVTLPNIMKAKKKSLEIVKPETLGVDVAPRLATLKVAEPSKRKAGVKLPDAKALVDKLRNEAKVI 249
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A1F3Y9E7_9PROT (Electron transporter RnfB n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3Y9E7_9PROT) HSP 1 Score: 407 bits (1045), Expect = 1.280e-139 Identity = 215/249 (86.35%), Postives = 234/249 (93.98%), Query Frame = 1 Query: 1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747 MKVLVSVKRVVDYNVKVRVK+DGTGVETANVKMSMNPFDEIA+EEAVRLKEAGVATE++AVSCG ACQETLRTALAIGADRAILVE++ ELQPLAVAK+LKAVC KE+P+LVILGKQAIDDDSNQTGQMLAAL+GW QATFASK + KAQVTREVDGGLET+S++LPAIVT+DLRLNEPRYVTLPNIMKAKKK LEN+KPDALGVD+APRL TLKVVEPPKRKAG++VPDA LV KLRNEAKVI Sbjct: 1 MKVLVSVKRVVDYNVKVRVKADGTGVETANVKMSMNPFDEIALEEAVRLKEAGVATEVVAVSCGAAACQETLRTALAIGADRAILVESNEELQPLAVAKILKAVCQKEAPRLVILGKQAIDDDSNQTGQMLAALLGWPQATFASKIKIENDKAQVTREVDGGLETVSVRLPAIVTSDLRLNEPRYVTLPNIMKAKKKPLENLKPDALGVDIAPRLATLKVVEPPKRKAGVRVPDAKALVDKLRNEAKVI 249
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A536ZC50_9PROT (Electron transfer flavoprotein subunit beta/FixA family protein n=8 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536ZC50_9PROT) HSP 1 Score: 402 bits (1034), Expect = 6.240e-138 Identity = 216/250 (86.40%), Postives = 231/250 (92.40%), Query Frame = 1 Query: 1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVIS 750 MK+LV+VKRVVD+NVKVRVK+DG+GVETANVKMSMNPFDEIAVEEA+RLKEAG ATEI+AVSCG ACQETLRTALA+GADRAILVETDVELQPLAVAKLL AV KE PQLVILGKQAIDDD NQTGQMLAAL+GWSQATFASK +DG+A+VTREVDGGLETISIK PA+VTTDLRLNEPRYVTLPNIMKAKKK LE +KPD LGVDVAPRLKTLKV EPPKRKAG KVPDA LVAKLRNEAKVI+ Sbjct: 1 MKILVAVKRVVDFNVKVRVKADGSGVETANVKMSMNPFDEIAVEEAIRLKEAGAATEIVAVSCGMQACQETLRTALALGADRAILVETDVELQPLAVAKLLLAVARKEIPQLVILGKQAIDDDCNQTGQMLAALLGWSQATFASKVKISDGRAEVTREVDGGLETISIKTPAVVTTDLRLNEPRYVTLPNIMKAKKKPLEVLKPDVLGVDVAPRLKTLKVEEPPKRKAGAKVPDARALVAKLRNEAKVIA 250
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: UPI0019A75A59 (Electron transfer flavoprotein subunit beta/FixA family protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019A75A59) HSP 1 Score: 402 bits (1033), Expect = 8.540e-138 Identity = 216/249 (86.75%), Postives = 233/249 (93.57%), Query Frame = 1 Query: 1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747 MKVLVSVKRVVDYNVKVRVK+DGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEI+AVSCG ACQETLRTALAIGADRAILVET ELQPLAVAKLL+ +C KE+P+LVILGKQAIDDDSNQTGQMLAALMGWSQATFASK + +A+VTREVDGGLET+SIKLPAIVTTDLRLNEPRYVTLPNIMKAKKK LEN KP+ALGVDV+PRL+T+KVVEPPKRKAG+KVPD +LV +LRNEAKVI Sbjct: 1 MKVLVSVKRVVDYNVKVRVKADGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIVAVSCGLPACQETLRTALAIGADRAILVETSEELQPLAVAKLLQKICEKEAPRLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKLVVENEQAKVTREVDGGLETLSIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKPLENHKPEALGVDVSPRLQTIKVVEPPKRKAGVKVPDPKSLVDRLRNEAKVI 249
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A1F4AVJ0_9PROT (Electron transporter RnfB n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AVJ0_9PROT) HSP 1 Score: 401 bits (1031), Expect = 1.720e-137 Identity = 213/249 (85.54%), Postives = 230/249 (92.37%), Query Frame = 1 Query: 1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747 MKVLV VKRVVDYNVKVRVK+DGTGVETANVKMSMNPFDEIAVEEA+RL+EAGVATE+IAVSCG ACQETLRTALAIGADRAILVE++VELQPLAVAKLLKAVC KE PQLV+LGKQAIDDD+NQTGQMLA L+GW+QATFASK QVTREVDGGL+TI+IKLPA+VTTDLRLNEPRYVTLPNIMKAKKK +E +KP+ALGVDVAPRLKTLKV EPPKRKAG+KVPDA TLV KLRNEAKVI Sbjct: 1 MKVLVPVKRVVDYNVKVRVKADGTGVETANVKMSMNPFDEIAVEEAMRLREAGVATEVIAVSCGVTACQETLRTALAIGADRAILVESNVELQPLAVAKLLKAVCEKEKPQLVLLGKQAIDDDANQTGQMLAGLLGWAQATFASKVKVEGESVQVTREVDGGLDTIAIKLPAVVTTDLRLNEPRYVTLPNIMKAKKKPMETLKPEALGVDVAPRLKTLKVTEPPKRKAGVKVPDAKTLVEKLRNEAKVI 249
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A536XX75_9PROT (Electron transfer flavoprotein subunit beta/FixA family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XX75_9PROT) HSP 1 Score: 397 bits (1020), Expect = 8.060e-136 Identity = 209/249 (83.94%), Postives = 230/249 (92.37%), Query Frame = 1 Query: 1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747 MKVLV+VKRVVD+NVKVRVK+D +GVETANVKMSMNPFDEIAVE AVRLKEAG ATEIIA+SCG CQETLRTALAIGADRAILVET ELQPLAVAKLL+A+C KESPQLVI+GKQAIDDDSNQTGQMLAAL+GW QATFASK A+G+A+VTREVDGGLET+SIKLPA++TTDLRLNEPRYVTLPNIMKAKKK LE +KP+ALGVDV+PRL TLKVVEPPKRKAG+KVPDA L+ KLRNEAKV+ Sbjct: 1 MKVLVAVKRVVDFNVKVRVKADNSGVETANVKMSMNPFDEIAVEAAVRLKEAGSATEIIAISCGVAQCQETLRTALAIGADRAILVETAAELQPLAVAKLLRAICQKESPQLVIMGKQAIDDDSNQTGQMLAALLGWPQATFASKIELAEGRAKVTREVDGGLETVSIKLPAVITTDLRLNEPRYVTLPNIMKAKKKALETLKPEALGVDVSPRLATLKVVEPPKRKAGVKVPDAKALLEKLRNEAKVL 249
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A521Z068_9PROT (Electron transfer flavoprotein subunit beta/FixA family protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521Z068_9PROT) HSP 1 Score: 396 bits (1017), Expect = 2.300e-135 Identity = 215/249 (86.35%), Postives = 228/249 (91.57%), Query Frame = 1 Query: 1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747 MK+LVSVKRVVD+NVKVRVK+DGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEI+ VSCG ACQETLRTALAIGADRAILVET+ ELQPLAVAKLLK V KE P LVILGKQAIDDD+NQTGQMLAAL+ W QATFASK + GKA+VTREVDGGLET+SIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLE +KPDALGVDVAPRL T+KVVEP KRKAGIKVPDA LV KLRNEAKV+ Sbjct: 1 MKILVSVKRVVDFNVKVRVKADGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIVVVSCGAQACQETLRTALAIGADRAILVETNEELQPLAVAKLLKKVTEKEQPGLVILGKQAIDDDANQTGQMLAALLNWPQATFASKVKISSGKAEVTREVDGGLETLSIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLEILKPDALGVDVAPRLTTVKVVEPSKRKAGIKVPDAKALVDKLRNEAKVL 249
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A537A3X3_9PROT (Electron transfer flavoprotein subunit beta/FixA family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A3X3_9PROT) HSP 1 Score: 392 bits (1008), Expect = 5.350e-134 Identity = 212/249 (85.14%), Postives = 227/249 (91.16%), Query Frame = 1 Query: 1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747 MK+LV+VKRVVD+NVKVRVK+D TGVETANVKMSMNPFDEIAVE AVRLKEAG ATEI+AVSCG ACQETLRTALAIGADRAILVET ELQPLAVAKLLKA+C KESPQLVILGKQAIDDD+NQTGQMLAAL+GW QATFASK A A+VTREVDGGLET+SIKLPA++TTDLRLNEPRYVTLPNIMKAKKKTLE +KP+ALGVDVAPRL TLKVVEP KRKAGIKV DA LV KLRN+AKVI Sbjct: 1 MKILVAVKRVVDFNVKVRVKADNTGVETANVKMSMNPFDEIAVEAAVRLKEAGAATEIVAVSCGVQACQETLRTALAIGADRAILVETSEELQPLAVAKLLKAICQKESPQLVILGKQAIDDDANQTGQMLAALLGWPQATFASKIELAGQGAKVTREVDGGLETVSIKLPAVITTDLRLNEPRYVTLPNIMKAKKKTLEALKPEALGVDVAPRLATLKVVEPAKRKAGIKVADAKALVDKLRNDAKVI 249
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Match: A0A6N4T7P0_9BURK (Electron transfer flavoprotein subunit beta n=28 Tax=Bacteria TaxID=2 RepID=A0A6N4T7P0_9BURK) HSP 1 Score: 392 bits (1007), Expect = 7.870e-134 Identity = 209/249 (83.94%), Postives = 224/249 (89.96%), Query Frame = 1 Query: 1 MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKEAGVATEIIAVSCGPLACQETLRTALAIGADRAILVETDVELQPLAVAKLLKAVCAKESPQLVILGKQAIDDDSNQTGQMLAALMGWSQATFASKFAAADGKAQVTREVDGGLETISIKLPAIVTTDLRLNEPRYVTLPNIMKAKKKTLENIKPDALGVDVAPRLKTLKVVEPPKRKAGIKVPDAATLVAKLRNEAKVI 747 MKVLV VKRVVDYNVKVRVKSDG+GV+ ANVKMSMNPFDEIAVEEA RLKEAGV TE++AVSCG CQETLRTA+AIGADR ILVE+DVELQPLAVAKLLKA+ KE PQL+ILGKQAIDDD NQTGQMLAAL+GW QATFASK ADGKA VTREVDGGLET+S+ LPAI+TTDLRLNEPRYVTLPNIMKAKKK L+N+KP LGVDVA R+KTLKV EPPKR AGIKVPD ATLVAKLRNEAKVI Sbjct: 1 MKVLVPVKRVVDYNVKVRVKSDGSGVDIANVKMSMNPFDEIAVEEATRLKEAGVVTEVVAVSCGVAQCQETLRTAMAIGADRGILVESDVELQPLAVAKLLKALADKEQPQLIILGKQAIDDDCNQTGQMLAALLGWPQATFASKVTVADGKATVTREVDGGLETLSLTLPAIITTDLRLNEPRYVTLPNIMKAKKKQLDNVKPADLGVDVASRVKTLKVTEPPKRSAGIKVPDVATLVAKLRNEAKVI 249 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12507.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12507.1.1 >prot_P-wetherbeei_contig12507.1.1 ID=prot_P-wetherbeei_contig12507.1.1|Name=mRNA_P-wetherbeei_contig12507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp MKVLVSVKRVVDYNVKVRVKSDGTGVETANVKMSMNPFDEIAVEEAVRLKback to top mRNA from alignment at P-wetherbeei_contig12507:3..1195- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12507.1.1 ID=mRNA_P-wetherbeei_contig12507.1.1|Name=mRNA_P-wetherbeei_contig12507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1193bp|location=Sequence derived from alignment at P-wetherbeei_contig12507:3..1195- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12507:3..1195- >mRNA_P-wetherbeei_contig12507.1.1 ID=mRNA_P-wetherbeei_contig12507.1.1|Name=mRNA_P-wetherbeei_contig12507.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig12507:3..1195- (Phaeothamnion wetherbeei SAG_119_79)back to top |